RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 SHISA4Q96DD7 197 aa5.87□□□□□ -1.47
TRAPPC13-203ENST00000415825 CNTD2Q9H8S5 307 aa5.87□□□□□ -1.47
TRAPPC13-203ENST00000415825 SRRDQ9UH36 339 aa5.87□□□□□ -1.47
TRAPPC13-203ENST00000415825 TAF6LQ9Y6J9 622 aa5.87□□□□□ -1.47
TRAPPC13-203ENST00000415825 RBM47A0AV96 593 aaKnown RBP5.86□□□□□ -1.47
TRAPPC13-203ENST00000415825 EIF4BP23588 611 aaKnown RBP5.86□□□□□ -1.47
TRAPPC13-203ENST00000415825 RPL6Q02878 288 aaKnown RBP5.86□□□□□ -1.47
TRAPPC13-203ENST00000415825 FAM129CQ86XR2 697 aa5.86□□□□□ -1.47
TRAPPC13-203ENST00000415825 MAP6Q96JE9 813 aa5.86□□□□□ -1.47
TRAPPC13-203ENST00000415825 C1orf115Q9H7X2 142 aa5.86□□□□□ -1.47
TRAPPC13-203ENST00000415825 IRS4O14654 1257 aaPredicted RBP5.85□□□□□ -1.47
TRAPPC13-203ENST00000415825 PFKLP17858 780 aa5.85□□□□□ -1.47
TRAPPC13-203ENST00000415825 ENDOUP21128 410 aaKnown RBP5.85□□□□□ -1.47
TRAPPC13-203ENST00000415825 LAPTM5Q13571 262 aa5.85□□□□□ -1.47
TRAPPC13-203ENST00000415825 RAB3GAP1Q15042 981 aa5.85□□□□□ -1.47
TRAPPC13-203ENST00000415825 MAP3K11Q16584 847 aa5.85□□□□□ -1.47
TRAPPC13-203ENST00000415825 GALNT18Q6P9A2 607 aa5.85□□□□□ -1.47
TRAPPC13-203ENST00000415825 TMC6Q7Z403 805 aa5.85□□□□□ -1.47
TRAPPC13-203ENST00000415825 PHACTR4Q8IZ21 702 aa5.85□□□□□ -1.47
TRAPPC13-203ENST00000415825 JARID2Q92833 1246 aaPredicted RBP5.85□□□□□ -1.47
TRAPPC13-203ENST00000415825 GNEQ9Y223 722 aaKnown RBP5.85□□□□□ -1.47
TRAPPC13-203ENST00000415825 PCDHB5Q9Y5E4 795 aa5.85□□□□□ -1.47
TRAPPC13-203ENST00000415825 GTF3C3Q9Y5Q9 886 aa5.85□□□□□ -1.47
TRAPPC13-203ENST00000415825 SUV39H1O43463 412 aa5.84□□□□□ -1.47
TRAPPC13-203ENST00000415825 LRRN2O75325 713 aa5.84□□□□□ -1.47
TRAPPC13-203ENST00000415825 GBP1P32455 592 aa5.84□□□□□ -1.47
TRAPPC13-203ENST00000415825 CDR1P51861 262 aa5.84□□□□□ -1.47
TRAPPC13-203ENST00000415825 RTP1P59025 263 aa5.84□□□□□ -1.47
TRAPPC13-203ENST00000415825 YBX1P67809 324 aaKnown RBP5.84□□□□□ -1.47
TRAPPC13-203ENST00000415825 RNF4P78317 190 aa5.84□□□□□ -1.47
TRAPPC13-203ENST00000415825 AGMOQ6ZNB7 445 aa5.84□□□□□ -1.47
TRAPPC13-203ENST00000415825 CCDC74BQ96LY2 380 aa5.84□□□□□ -1.47
TRAPPC13-203ENST00000415825 KREMEN1Q96MU8 473 aa5.84□□□□□ -1.47
TRAPPC13-203ENST00000415825 A0A1W2PQ27 194 aa5.83□□□□□ -1.48
TRAPPC13-203ENST00000415825 A0A1W2PQ64 194 aa5.83□□□□□ -1.48
TRAPPC13-203ENST00000415825 A0A1W2PQC6 194 aa5.83□□□□□ -1.48
TRAPPC13-203ENST00000415825 A0A1W2PQD8 194 aa5.83□□□□□ -1.48
TRAPPC13-203ENST00000415825 WTIPA6NIX2 430 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC13-203ENST00000415825 BUB1BO60566 1050 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC13-203ENST00000415825 LIG3P49916 1009 aa5.83□□□□□ -1.48
TRAPPC13-203ENST00000415825 KRTAP10-2P60368 255 aa5.83□□□□□ -1.48
TRAPPC13-203ENST00000415825 NMIQ13287 307 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC13-203ENST00000415825 MLECQ14165 292 aa5.83□□□□□ -1.48
TRAPPC13-203ENST00000415825 RTP5Q14D33 572 aa5.83□□□□□ -1.48
TRAPPC13-203ENST00000415825 LDHDQ86WU2 507 aa5.83□□□□□ -1.48
TRAPPC13-203ENST00000415825 SYTL5Q8TDW5 730 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC13-203ENST00000415825 TCFL5Q9UL49 500 aa5.83□□□□□ -1.48
TRAPPC13-203ENST00000415825 SDHBP21912 280 aa5.82□□□□□ -1.48
TRAPPC13-203ENST00000415825 ERVFRD-1P60508 538 aa5.82□□□□□ -1.48
TRAPPC13-203ENST00000415825 FMR1Q06787 632 aaKnown RBP eCLIP5.82□□□□□ -1.48
TRAPPC13-203ENST00000415825 HHIPL2Q6UWX4 724 aa5.82□□□□□ -1.48
TRAPPC13-203ENST00000415825 SLFN12Q8IYM2 578 aa5.82□□□□□ -1.48
TRAPPC13-203ENST00000415825 ZNF655Q8N720 491 aaPredicted RBP5.82□□□□□ -1.48
TRAPPC13-203ENST00000415825 FOXP3Q9BZS1 431 aa5.82□□□□□ -1.48
TRAPPC13-203ENST00000415825 UPK3BL1B0FP48 263 aa5.81□□□□□ -1.48
TRAPPC13-203ENST00000415825 UPK3BL2E5RIL1 263 aa5.81□□□□□ -1.48
TRAPPC13-203ENST00000415825 GRIN3BO60391 1043 aa5.81□□□□□ -1.48
TRAPPC13-203ENST00000415825 TARBP2Q15633 366 aaKnown RBP5.81□□□□□ -1.48
TRAPPC13-203ENST00000415825 DAGLBQ8NCG7 672 aa5.81□□□□□ -1.48
TRAPPC13-203ENST00000415825 EAF1Q96JC9 268 aaPredicted RBP5.81□□□□□ -1.48
TRAPPC13-203ENST00000415825 G6PC3Q9BUM1 346 aa5.81□□□□□ -1.48
TRAPPC13-203ENST00000415825 TNFRSF10DQ9UBN6 386 aa5.81□□□□□ -1.48
TRAPPC13-203ENST00000415825 EBF1Q9UH73 591 aa5.81□□□□□ -1.48
TRAPPC13-203ENST00000415825 KLHL3Q9UH77 587 aa5.81□□□□□ -1.48
TRAPPC13-203ENST00000415825 A0A1W2PQJ5 194 aa5.8□□□□□ -1.48
TRAPPC13-203ENST00000415825 SHISA3A0PJX4 238 aa5.8□□□□□ -1.48
TRAPPC13-203ENST00000415825 NUDT19A8MXV4 375 aa5.8□□□□□ -1.48
TRAPPC13-203ENST00000415825 FKTNO75072 461 aa5.8□□□□□ -1.48
TRAPPC13-203ENST00000415825 ZXDAP98168 799 aa5.8□□□□□ -1.48
TRAPPC13-203ENST00000415825 CYP4F8P98187 520 aa5.8□□□□□ -1.48
TRAPPC13-203ENST00000415825 ZFYVE27Q5T4F4 411 aa5.8□□□□□ -1.48
TRAPPC13-203ENST00000415825 AEBP1Q8IUX7 1158 aa5.8□□□□□ -1.48
TRAPPC13-203ENST00000415825 TMEFF1Q8IYR6 380 aa5.8□□□□□ -1.48
TRAPPC13-203ENST00000415825 RETREG2Q8NC44 543 aa5.8□□□□□ -1.48
TRAPPC13-203ENST00000415825 ASB16Q96NS5 453 aa5.8□□□□□ -1.48
TRAPPC13-203ENST00000415825 EPB41L4AQ9HCS5 686 aaPredicted RBP5.8□□□□□ -1.48
TRAPPC13-203ENST00000415825 FAN1Q9Y2M0 1017 aa5.8□□□□□ -1.48
TRAPPC13-203ENST00000415825 BRD1O95696 1058 aa5.79□□□□□ -1.48
TRAPPC13-203ENST00000415825 SYPP08247 313 aa5.79□□□□□ -1.48
TRAPPC13-203ENST00000415825 TMEM201Q5SNT2 666 aa5.79□□□□□ -1.48
TRAPPC13-203ENST00000415825 IGDCC3Q8IVU1 814 aa5.79□□□□□ -1.48
TRAPPC13-203ENST00000415825 HHIPL1Q96JK4 782 aa5.79□□□□□ -1.48
TRAPPC13-203ENST00000415825 FCRL2Q96LA5 508 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC13-203ENST00000415825 WWC3Q9ULE0 1092 aa5.79□□□□□ -1.48
TRAPPC13-203ENST00000415825 ADAMTS20P59510 1910 aa5.79□□□□□ -1.48
TRAPPC13-203ENST00000415825 NOTOA8MTQ0 251 aa5.78□□□□□ -1.48
TRAPPC13-203ENST00000415825 LDHBP07195 334 aaKnown RBP5.78□□□□□ -1.48
TRAPPC13-203ENST00000415825 PRKCAP17252 672 aa5.78□□□□□ -1.48
TRAPPC13-203ENST00000415825 GNA15P30679 374 aa5.78□□□□□ -1.48
TRAPPC13-203ENST00000415825 SLURP1P55000 103 aa5.78□□□□□ -1.48
TRAPPC13-203ENST00000415825 CAP1Q01518 475 aa5.78□□□□□ -1.48
TRAPPC13-203ENST00000415825 NR1I3Q14994 352 aa5.78□□□□□ -1.48
TRAPPC13-203ENST00000415825 ZC3H14Q6PJT7 736 aaKnown RBP5.78□□□□□ -1.48
TRAPPC13-203ENST00000415825 USHBP1Q8N6Y0 703 aa5.78□□□□□ -1.48
TRAPPC13-203ENST00000415825 LINC00116Q8NCU8 138 aa5.78□□□□□ -1.48
TRAPPC13-203ENST00000415825 NUP43Q8NFH3 380 aa5.78□□□□□ -1.48
TRAPPC13-203ENST00000415825 TCTN2Q96GX1 697 aa5.78□□□□□ -1.48
TRAPPC13-203ENST00000415825 SETDB2Q96T68 719 aa5.78□□□□□ -1.48
TRAPPC13-203ENST00000415825 KLHL14Q9P2G3 628 aa5.78□□□□□ -1.48
TRAPPC13-203ENST00000415825 CORINQ9Y5Q5 1042 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms