RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.27□□□□□ -0.28
RFFL-205ENST00000415395 ANO10Q9NW15 660 aa13.27□□□□□ -0.28
RFFL-205ENST00000415395 TFIP11Q9UBB9 837 aaKnown RBP13.27□□□□□ -0.28
RFFL-205ENST00000415395 CNTNAP5Q8WYK1 1306 aa13.27□□□□□ -0.28
RFFL-205ENST00000415395 RIOK3O14730 519 aaKnown RBP13.27□□□□□ -0.29
RFFL-205ENST00000415395 CTIFO43310 598 aaKnown RBP13.27□□□□□ -0.29
RFFL-205ENST00000415395 AKR1B1P15121 316 aa13.27□□□□□ -0.29
RFFL-205ENST00000415395 SMARCA1P28370 1054 aa13.27□□□□□ -0.29
RFFL-205ENST00000415395 UTP14CQ5TAP6 766 aaKnown RBP13.27□□□□□ -0.29
RFFL-205ENST00000415395 KRT40Q6A162 431 aa13.27□□□□□ -0.29
RFFL-205ENST00000415395 FAM177A1Q8N128 213 aaPredicted RBP13.27□□□□□ -0.29
RFFL-205ENST00000415395 MYOZ2Q9NPC6 264 aa13.27□□□□□ -0.29
RFFL-205ENST00000415395 BECN2A8MW95 431 aa13.26□□□□□ -0.29
RFFL-205ENST00000415395 KIF2AO00139 706 aaPredicted RBP13.26□□□□□ -0.29
RFFL-205ENST00000415395 NRDCO43847 1150 aa13.26□□□□□ -0.29
RFFL-205ENST00000415395 PPFIA3O75145 1194 aa13.26□□□□□ -0.29
RFFL-205ENST00000415395 TTLL1O95922 423 aa13.26□□□□□ -0.29
RFFL-205ENST00000415395 KIF23Q02241 960 aaPredicted RBP13.26□□□□□ -0.29
RFFL-205ENST00000415395 SAFBQ15424 915 aaKnown RBP eCLIP13.26□□□□□ -0.29
RFFL-205ENST00000415395 ZRSR1Q15695 479 aaKnown RBP13.26□□□□□ -0.29
RFFL-205ENST00000415395 C17orf53Q8N3J3 647 aaPredicted RBP13.26□□□□□ -0.29
RFFL-205ENST00000415395 FEZ1Q99689 392 aa13.26□□□□□ -0.29
RFFL-205ENST00000415395 FHDC1Q9C0D6 1143 aaPredicted RBP13.26□□□□□ -0.29
RFFL-205ENST00000415395 DNAJC18Q9H819 358 aa13.26□□□□□ -0.29
RFFL-205ENST00000415395 RCOR1Q9UKL0 485 aa13.26□□□□□ -0.29
RFFL-205ENST00000415395 PALM3A6NDB9 673 aaPredicted RBP13.25□□□□□ -0.29
RFFL-205ENST00000415395 NR1I2O75469 434 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 PLEKHA8P1O95397 391 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 LMNB1P20700 586 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 U2AF2P26368 475 aaKnown RBP eCLIP13.25□□□□□ -0.292e-6■■□□□ 12.6
RFFL-205ENST00000415395 TNNI2P48788 182 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 FOSBP53539 338 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 TPM4P67936 248 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 GUCY1B3Q02153 619 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 CERKLQ49MI3 558 aaPredicted RBP13.25□□□□□ -0.29
RFFL-205ENST00000415395 CEP57L1Q8IYX8 460 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 SRBD1Q8N5C6 995 aaKnown RBP13.25□□□□□ -0.29
RFFL-205ENST00000415395 ANKRD7Q92527 254 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 MAD2L2Q9UI95 211 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 CNTNAP1P78357 1384 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 WNT10BO00744 389 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 TBC1D12O60347 775 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 MMP1P03956 469 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 PRELPP51888 382 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 GSDMDP57764 484 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 FAM160A1Q05DH4 1040 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 TNFAIP1Q13829 316 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 PKN1Q16512 942 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 TPD52L1Q16890 204 aaPredicted RBP13.25□□□□□ -0.29
RFFL-205ENST00000415395 FAM173BQ6P4H8 233 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 TMEM179Q6ZVK1 233 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 ZNF710Q8N1W2 664 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 CCDC112Q8NEF3 446 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 PGBD1Q96JS3 809 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 AIFM3Q96NN9 605 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 CSRNP1Q96S65 589 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 SPZ1Q9BXG8 430 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 GTPBP4Q9BZE4 634 aaKnown RBP13.25□□□□□ -0.29
RFFL-205ENST00000415395 DNAJC25Q9H1X3 360 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 KANSL2Q9H9L4 492 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 CGNQ9P2M7 1197 aaKnown RBP13.25□□□□□ -0.29
RFFL-205ENST00000415395 SYNPO2Q9UMS6 1093 aa13.25□□□□□ -0.29
RFFL-205ENST00000415395 CLRN2A0PK11 232 aa13.24□□□□□ -0.29
RFFL-205ENST00000415395 TCP10L2B9ZVM9 353 aa13.24□□□□□ -0.29
RFFL-205ENST00000415395 PARP1P09874 1014 aaKnown RBP13.24□□□□□ -0.29
RFFL-205ENST00000415395 TNNT1P13805 278 aa13.24□□□□□ -0.29
RFFL-205ENST00000415395 GUCY1A2P33402 732 aa13.24□□□□□ -0.29
RFFL-205ENST00000415395 ASPRV1Q53RT3 343 aa13.24□□□□□ -0.29
RFFL-205ENST00000415395 OTUD7BQ6GQQ9 843 aa13.24□□□□□ -0.29
RFFL-205ENST00000415395 CCAR1Q8IX12 1150 aaKnown RBP13.24□□□□□ -0.29
RFFL-205ENST00000415395 CMTR1Q8N1G2 835 aaKnown RBP13.24□□□□□ -0.29
RFFL-205ENST00000415395 CCDC82Q8N4S0 544 aa13.24□□□□□ -0.29
RFFL-205ENST00000415395 MKL1Q969V6 931 aa13.24□□□□□ -0.29
RFFL-205ENST00000415395 FOXP1Q9H334 677 aaPredicted RBP13.24□□□□□ -0.29
RFFL-205ENST00000415395 SH3GLB2Q9NR46 395 aa13.24□□□□□ -0.29
RFFL-205ENST00000415395 NYAP2Q9P242 653 aa13.24□□□□□ -0.29
RFFL-205ENST00000415395 SNHG28P0DPA3 235 aa13.23□□□□□ -0.29
RFFL-205ENST00000415395 SCG2P13521 617 aa13.23□□□□□ -0.29
RFFL-205ENST00000415395 GMPSP49915 693 aaPredicted RBP13.23□□□□□ -0.29
RFFL-205ENST00000415395 GNL2Q13823 731 aaKnown RBP13.23□□□□□ -0.29
RFFL-205ENST00000415395 PFKFB3Q16875 520 aaPredicted RBP13.23□□□□□ -0.29
RFFL-205ENST00000415395 MYSM1Q5VVJ2 828 aa13.23□□□□□ -0.29
RFFL-205ENST00000415395 POLR3EQ9NVU0 708 aa13.23□□□□□ -0.29
RFFL-205ENST00000415395 RTEL1Q9NZ71 1219 aa13.23□□□□□ -0.29
RFFL-205ENST00000415395 V9GY48 417 aaPredicted RBP13.23□□□□□ -0.29
RFFL-205ENST00000415395 MPHOSPH10O00566 681 aaKnown RBP13.22□□□□□ -0.29
RFFL-205ENST00000415395 YEATS4O95619 227 aa13.22□□□□□ -0.29
RFFL-205ENST00000415395 TUBB4AP04350 444 aa13.22□□□□□ -0.29
RFFL-205ENST00000415395 ARHGAP27Q6ZUM4 889 aa13.22□□□□□ -0.29
RFFL-205ENST00000415395 MICALL2Q8IY33 904 aa13.22□□□□□ -0.29
RFFL-205ENST00000415395 SYT17Q9BSW7 474 aa13.22□□□□□ -0.29
RFFL-205ENST00000415395 PHF20Q9BVI0 1012 aa13.22□□□□□ -0.29
RFFL-205ENST00000415395 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.22□□□□□ -0.29
RFFL-205ENST00000415395 VEZTQ9HBM0 779 aa13.22□□□□□ -0.29
RFFL-205ENST00000415395 KLRF2D3W0D1 207 aa13.22□□□□□ -0.29
RFFL-205ENST00000415395 PDHBP11177 359 aa13.22□□□□□ -0.29
RFFL-205ENST00000415395 MAP3K10Q02779 954 aa13.22□□□□□ -0.29
RFFL-205ENST00000415395 IQCB1Q15051 598 aa13.22□□□□□ -0.29
RFFL-205ENST00000415395 ABCB5Q2M3G0 1257 aa13.22□□□□□ -0.29
RFFL-205ENST00000415395 GPATCH4Q5T3I0 446 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms