RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 CWC22Q9HCG8 908 aaKnown RBP17.57■□□□□ 0.4
LIMS4-201ENST00000413601 NMT2O60551 498 aa17.56■□□□□ 0.4
LIMS4-201ENST00000413601 NDUFB10O96000 172 aa17.56■□□□□ 0.4
LIMS4-201ENST00000413601 INHAP05111 366 aa17.56■□□□□ 0.4
LIMS4-201ENST00000413601 FGRP09769 529 aa17.56■□□□□ 0.4
LIMS4-201ENST00000413601 RRP12Q5JTH9 1297 aaKnown RBP17.56■□□□□ 0.4
LIMS4-201ENST00000413601 MB21D1Q8N884 522 aa17.56■□□□□ 0.4
LIMS4-201ENST00000413601 MOV10L1Q9BXT6 1211 aaKnown RBP17.56■□□□□ 0.4
LIMS4-201ENST00000413601 NBPF3Q9H094 633 aa17.56■□□□□ 0.4
LIMS4-201ENST00000413601 IL17RBQ9NRM6 502 aa17.56■□□□□ 0.4
LIMS4-201ENST00000413601 TOMM22Q9NS69 142 aa17.56■□□□□ 0.4
LIMS4-201ENST00000413601 ORC4O43929 436 aa17.55■□□□□ 0.4
LIMS4-201ENST00000413601 PLS1Q14651 629 aa17.55■□□□□ 0.4
LIMS4-201ENST00000413601 MORN1Q5T089 497 aa17.55■□□□□ 0.4
LIMS4-201ENST00000413601 SOCS4Q8WXH5 440 aa17.55■□□□□ 0.4
LIMS4-201ENST00000413601 USP6NLQ92738 828 aa17.55■□□□□ 0.4
LIMS4-201ENST00000413601 SPATC1LQ9H0A9 340 aa17.55■□□□□ 0.4
LIMS4-201ENST00000413601 RNF208Q9H0X6 261 aa17.55■□□□□ 0.4
LIMS4-201ENST00000413601 UNC93B1Q9H1C4 597 aa17.55■□□□□ 0.4
LIMS4-201ENST00000413601 IL25Q9H293 177 aa17.55■□□□□ 0.4
LIMS4-201ENST00000413601 ADAMTS5Q9UNA0 930 aa17.55■□□□□ 0.4
LIMS4-201ENST00000413601 TNRC18O15417 2968 aaPredicted RBP17.55■□□□□ 0.4
LIMS4-201ENST00000413601 PLXNA1Q9UIW2 1896 aa17.54■□□□□ 0.4
LIMS4-201ENST00000413601 TBC1D10CQ8IV04 446 aa17.54■□□□□ 0.4
LIMS4-201ENST00000413601 GMCL1P1Q8NEA9 526 aa17.54■□□□□ 0.4
LIMS4-201ENST00000413601 PPP1R9AQ9ULJ8 1098 aa17.54■□□□□ 0.4
LIMS4-201ENST00000413601 STX8Q9UNK0 236 aa17.54■□□□□ 0.4
LIMS4-201ENST00000413601 ZNF236Q9UL36 1845 aa17.54■□□□□ 0.4
LIMS4-201ENST00000413601 SLC15A5A6NIM6 579 aa17.53■□□□□ 0.4
LIMS4-201ENST00000413601 VWA5AO00534 786 aa17.53■□□□□ 0.4
LIMS4-201ENST00000413601 HMGCRP04035 888 aa17.53■□□□□ 0.4
LIMS4-201ENST00000413601 XRCC5P13010 732 aaKnown RBP17.53■□□□□ 0.4
LIMS4-201ENST00000413601 PTPREP23469 700 aa17.53■□□□□ 0.4
LIMS4-201ENST00000413601 RGS2P41220 211 aa17.53■□□□□ 0.4
LIMS4-201ENST00000413601 TRIM32Q13049 653 aa17.53■□□□□ 0.4
LIMS4-201ENST00000413601 TMEM132BQ14DG7 1078 aa17.53■□□□□ 0.4
LIMS4-201ENST00000413601 AKNAD1Q5T1N1 836 aa17.53■□□□□ 0.4
LIMS4-201ENST00000413601 SLFN13Q68D06 897 aa17.53■□□□□ 0.4
LIMS4-201ENST00000413601 MFSD6Q6ZSS7 791 aa17.53■□□□□ 0.4
LIMS4-201ENST00000413601 CENPQQ7L2Z9 268 aaPredicted RBP17.53■□□□□ 0.4
LIMS4-201ENST00000413601 TRIB2Q92519 343 aa17.53■□□□□ 0.4
LIMS4-201ENST00000413601 CHMP4CQ96CF2 233 aa17.53■□□□□ 0.4
LIMS4-201ENST00000413601 SLF1Q9BQI6 1058 aa17.53■□□□□ 0.4
LIMS4-201ENST00000413601 DSCC1Q9BVC3 393 aa17.53■□□□□ 0.4
LIMS4-201ENST00000413601 SYNPO2Q9UMS6 1093 aa17.53■□□□□ 0.4
LIMS4-201ENST00000413601 IVNS1ABPQ9Y6Y0 642 aa17.53■□□□□ 0.4
LIMS4-201ENST00000413601 BRCA2P51587 3418 aa17.53■□□□□ 0.4
LIMS4-201ENST00000413601 ZNF213O14771 459 aa17.52■□□□□ 0.4
LIMS4-201ENST00000413601 GJB1P08034 283 aa17.52■□□□□ 0.4
LIMS4-201ENST00000413601 ERCC3P19447 782 aa17.52■□□□□ 0.4
LIMS4-201ENST00000413601 CHMLP26374 656 aa17.52■□□□□ 0.4
LIMS4-201ENST00000413601 MAP2K5Q13163 448 aa17.52■□□□□ 0.4
LIMS4-201ENST00000413601 CCL14Q16627 93 aa17.52■□□□□ 0.4
LIMS4-201ENST00000413601 PPP4R3BQ5MIZ7 849 aa17.52■□□□□ 0.4
LIMS4-201ENST00000413601 SKAP1Q86WV1 359 aa17.52■□□□□ 0.4
LIMS4-201ENST00000413601 NCAPG2Q86XI2 1143 aa17.52■□□□□ 0.4
LIMS4-201ENST00000413601 SHCBP1Q8NEM2 672 aa17.52■□□□□ 0.4
LIMS4-201ENST00000413601 STAG1Q8WVM7 1258 aa17.52■□□□□ 0.4
LIMS4-201ENST00000413601 GRB14Q14449 540 aa17.51■□□□□ 0.39
LIMS4-201ENST00000413601 PRPF38AQ8NAV1 312 aaKnown RBP17.51■□□□□ 0.39
LIMS4-201ENST00000413601 NKX2-3Q8TAU0 364 aa17.51■□□□□ 0.39
LIMS4-201ENST00000413601 APBA2Q99767 749 aa17.51■□□□□ 0.39
LIMS4-201ENST00000413601 NEDD4P46934 1319 aa17.5■□□□□ 0.39
LIMS4-201ENST00000413601 PCP11498 1178 aaKnown RBP17.5■□□□□ 0.39
LIMS4-201ENST00000413601 BMP3P12645 472 aa17.5■□□□□ 0.39
LIMS4-201ENST00000413601 ZKSCAN1P17029 563 aaPredicted RBP17.5■□□□□ 0.39
LIMS4-201ENST00000413601 MCCP23508 829 aa17.5■□□□□ 0.39
LIMS4-201ENST00000413601 GJA8P48165 433 aa17.5■□□□□ 0.39
LIMS4-201ENST00000413601 TRMT44Q8IYL2 757 aaKnown RBP17.5■□□□□ 0.39
LIMS4-201ENST00000413601 REPS2Q8NFH8 660 aa17.5■□□□□ 0.39
LIMS4-201ENST00000413601 RUFY2Q8WXA3 655 aa17.5■□□□□ 0.39
LIMS4-201ENST00000413601 KIFC2Q96AC6 838 aa17.5■□□□□ 0.39
LIMS4-201ENST00000413601 SHISA4Q96DD7 197 aa17.5■□□□□ 0.39
LIMS4-201ENST00000413601 RNF41Q9H4P4 317 aaPredicted RBP17.5■□□□□ 0.39
LIMS4-201ENST00000413601 MROH8Q9H579 483 aa17.5■□□□□ 0.39
LIMS4-201ENST00000413601 FEM1BQ9UK73 627 aa17.5■□□□□ 0.39
LIMS4-201ENST00000413601 ZNF214Q9UL59 606 aaPredicted RBP17.5■□□□□ 0.39
LIMS4-201ENST00000413601 ISY1Q9ULR0 285 aaKnown RBP17.5■□□□□ 0.39
LIMS4-201ENST00000413601 RAD50Q92878 1312 aa17.49■□□□□ 0.39
LIMS4-201ENST00000413601 FRMPD3Q5JV73 1810 aa17.49■□□□□ 0.39
LIMS4-201ENST00000413601 STRNO43815 780 aa17.49■□□□□ 0.39
LIMS4-201ENST00000413601 SLC25A27O95847 323 aa17.49■□□□□ 0.39
LIMS4-201ENST00000413601 STAT3P40763 770 aa17.49■□□□□ 0.39
LIMS4-201ENST00000413601 NOVP48745 357 aa17.49■□□□□ 0.39
LIMS4-201ENST00000413601 CACNB1Q02641 598 aaPredicted RBP17.49■□□□□ 0.39
LIMS4-201ENST00000413601 IMMTQ16891 758 aaKnown RBP17.49■□□□□ 0.39
LIMS4-201ENST00000413601 RASGRP2Q7LDG7 609 aa17.49■□□□□ 0.39
LIMS4-201ENST00000413601 RIOX2Q8IUF8 465 aa17.49■□□□□ 0.39
LIMS4-201ENST00000413601 NPLOC4Q8TAT6 608 aa17.49■□□□□ 0.39
LIMS4-201ENST00000413601 U2AF1L4Q8WU68 220 aaKnown RBP17.49■□□□□ 0.39
LIMS4-201ENST00000413601 GMCL1Q96IK5 515 aa17.49■□□□□ 0.39
LIMS4-201ENST00000413601 DEFB118Q96PH6 123 aa17.49■□□□□ 0.39
LIMS4-201ENST00000413601 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.49■□□□□ 0.39
LIMS4-201ENST00000413601 PAK6Q9NQU5 681 aaPredicted RBP17.49■□□□□ 0.39
LIMS4-201ENST00000413601 TCP11L1Q9NUJ3 509 aa17.49■□□□□ 0.39
LIMS4-201ENST00000413601 CTNNA3Q9UI47 895 aa17.49■□□□□ 0.39
LIMS4-201ENST00000413601 MTMR7Q9Y216 660 aa17.49■□□□□ 0.39
LIMS4-201ENST00000413601 RPTORQ8N122 1335 aa17.48■□□□□ 0.39
LIMS4-201ENST00000413601 TMEM232C9JQI7 657 aa17.48■□□□□ 0.39
LIMS4-201ENST00000413601 SGPL1O95470 568 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms