RNA–Protein interactions for RNA: ENST00000411642.6

TTC39A-207, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best)

Gene TTC39A, Length 931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-207ENST00000411642 MCCP23508 829 aa11.82□□□□□ -0.52
TTC39A-207ENST00000411642 SLC1A4P43007 532 aa11.82□□□□□ -0.52
TTC39A-207ENST00000411642 ANTXR2P58335 489 aa11.82□□□□□ -0.52
TTC39A-207ENST00000411642 COL9A3Q14050 684 aaPredicted RBP11.82□□□□□ -0.52
TTC39A-207ENST00000411642 KRT32Q14532 448 aa11.82□□□□□ -0.52
TTC39A-207ENST00000411642 COG2Q14746 738 aa11.82□□□□□ -0.52
TTC39A-207ENST00000411642 SART3Q15020 963 aaKnown RBP11.82□□□□□ -0.52
TTC39A-207ENST00000411642 SEC23AQ15436 765 aa11.82□□□□□ -0.52
TTC39A-207ENST00000411642 FAM110CQ1W6H9 321 aa11.82□□□□□ -0.52
TTC39A-207ENST00000411642 TSGA10IPQ3SY00 556 aa11.82□□□□□ -0.52
TTC39A-207ENST00000411642 IFIT1BQ5T764 474 aaKnown RBP11.82□□□□□ -0.52
TTC39A-207ENST00000411642 CD99L2Q8TCZ2 262 aa11.82□□□□□ -0.52
TTC39A-207ENST00000411642 GTF3C2Q8WUA4 911 aaPredicted RBP11.82□□□□□ -0.52
TTC39A-207ENST00000411642 ERO1AQ96HE7 468 aa11.82□□□□□ -0.52
TTC39A-207ENST00000411642 GMCL1Q96IK5 515 aa11.82□□□□□ -0.52
TTC39A-207ENST00000411642 PAGR1Q9BTK6 254 aa11.82□□□□□ -0.52
TTC39A-207ENST00000411642 USP26Q9BXU7 913 aa11.82□□□□□ -0.52
TTC39A-207ENST00000411642 KAT14Q9H8E8 782 aa11.82□□□□□ -0.52
TTC39A-207ENST00000411642 FBXO28Q9NVF7 368 aa11.82□□□□□ -0.52
TTC39A-207ENST00000411642 MYPNQ86TC9 1320 aa11.82□□□□□ -0.52
TTC39A-207ENST00000411642 PRC1O43663 620 aa11.81□□□□□ -0.52
TTC39A-207ENST00000411642 PEX10O60683 326 aa11.81□□□□□ -0.52
TTC39A-207ENST00000411642 EIF5BO60841 1220 aaKnown RBP11.81□□□□□ -0.52
TTC39A-207ENST00000411642 DSG3P32926 999 aa11.81□□□□□ -0.52
TTC39A-207ENST00000411642 MCM5P33992 734 aa11.81□□□□□ -0.52
TTC39A-207ENST00000411642 LACTBP83111 547 aaPredicted RBP11.81□□□□□ -0.52
TTC39A-207ENST00000411642 KIF22Q14807 665 aa11.81□□□□□ -0.52
TTC39A-207ENST00000411642 WTAPQ15007 396 aa11.81□□□□□ -0.52
TTC39A-207ENST00000411642 CCDC96Q2M329 555 aa11.81□□□□□ -0.52
TTC39A-207ENST00000411642 ADCK5Q3MIX3 580 aa11.81□□□□□ -0.52
TTC39A-207ENST00000411642 POTEEQ6S8J3 1075 aa11.81□□□□□ -0.52
TTC39A-207ENST00000411642 LBX2Q6XYB7 198 aa11.81□□□□□ -0.52
TTC39A-207ENST00000411642 PNMA1Q8ND90 353 aa11.81□□□□□ -0.52
TTC39A-207ENST00000411642 DCAF4Q8WV16 495 aa11.81□□□□□ -0.52
TTC39A-207ENST00000411642 ANKS1AQ92625 1134 aa11.81□□□□□ -0.52
TTC39A-207ENST00000411642 KCNB2Q92953 911 aa11.81□□□□□ -0.52
TTC39A-207ENST00000411642 ATG4CQ96DT6 458 aa11.81□□□□□ -0.52
TTC39A-207ENST00000411642 NEK1Q96PY6 1258 aa11.81□□□□□ -0.52
TTC39A-207ENST00000411642 SLF1Q9BQI6 1058 aa11.81□□□□□ -0.52
TTC39A-207ENST00000411642 TXNRD2Q9NNW7 524 aa11.81□□□□□ -0.52
TTC39A-207ENST00000411642 HOXC10Q9NYD6 342 aa11.81□□□□□ -0.52
TTC39A-207ENST00000411642 MORF4L1Q9UBU8 362 aa11.81□□□□□ -0.52
TTC39A-207ENST00000411642 PPP1R9AQ9ULJ8 1098 aa11.81□□□□□ -0.52
TTC39A-207ENST00000411642 SNX14Q9Y5W7 946 aa11.81□□□□□ -0.52
TTC39A-207ENST00000411642 TMEM232C9JQI7 657 aa11.8□□□□□ -0.52
TTC39A-207ENST00000411642 PDHBP11177 359 aa11.8□□□□□ -0.52
TTC39A-207ENST00000411642 ERVK-9P63128 1117 aa11.8□□□□□ -0.52
TTC39A-207ENST00000411642 ERVK-24P63145 666 aa11.8□□□□□ -0.52
TTC39A-207ENST00000411642 IKQ13123 557 aaPredicted RBP11.8□□□□□ -0.52
TTC39A-207ENST00000411642 C8orf34Q49A92 452 aa11.8□□□□□ -0.52
TTC39A-207ENST00000411642 TMEM67Q5HYA8 995 aa11.8□□□□□ -0.52
TTC39A-207ENST00000411642 KCTD1Q719H9 257 aa11.8□□□□□ -0.52
TTC39A-207ENST00000411642 ARHGAP39Q9C0H5 1083 aa11.8□□□□□ -0.52
TTC39A-207ENST00000411642 RBPJLQ9UBG7 517 aa11.8□□□□□ -0.52
TTC39A-207ENST00000411642 FEM1BQ9UK73 627 aa11.8□□□□□ -0.52
TTC39A-207ENST00000411642 RABGAP1Q9Y3P9 1069 aa11.8□□□□□ -0.52
TTC39A-207ENST00000411642 PLXNA1Q9UIW2 1896 aa11.8□□□□□ -0.52
TTC39A-207ENST00000411642 HTTP42858 3142 aa11.8□□□□□ -0.52
TTC39A-207ENST00000411642 CENPFP49454 3210 aa11.79□□□□□ -0.52
TTC39A-207ENST00000411642 CNMDO75829 334 aa11.79□□□□□ -0.52
TTC39A-207ENST00000411642 SEC24BO95487 1268 aa11.79□□□□□ -0.52
TTC39A-207ENST00000411642 STAT2P52630 851 aa11.79□□□□□ -0.52
TTC39A-207ENST00000411642 CAP1Q01518 475 aa11.79□□□□□ -0.52
TTC39A-207ENST00000411642 CTU1Q7Z7A3 348 aaKnown RBP11.79□□□□□ -0.52
TTC39A-207ENST00000411642 MB21D1Q8N884 522 aa11.79□□□□□ -0.52
TTC39A-207ENST00000411642 PRPF38AQ8NAV1 312 aaKnown RBP11.79□□□□□ -0.52
TTC39A-207ENST00000411642 GPRC5AQ8NFJ5 357 aa11.79□□□□□ -0.52
TTC39A-207ENST00000411642 IGDCC4Q8TDY8 1250 aa11.79□□□□□ -0.52
TTC39A-207ENST00000411642 KIFC2Q96AC6 838 aa11.79□□□□□ -0.52
TTC39A-207ENST00000411642 TMEM87BQ96K49 555 aa11.79□□□□□ -0.52
TTC39A-207ENST00000411642 TCEANC2Q96MN5 208 aa11.79□□□□□ -0.52
TTC39A-207ENST00000411642 JAKMIP1Q96N16 626 aaKnown RBP11.79□□□□□ -0.52
TTC39A-207ENST00000411642 MTA3Q9BTC8 594 aa11.79□□□□□ -0.52
TTC39A-207ENST00000411642 LRRC2Q9BYS8 371 aa11.79□□□□□ -0.52
TTC39A-207ENST00000411642 SENP2Q9HC62 589 aa11.79□□□□□ -0.52
TTC39A-207ENST00000411642 GPHNQ9NQX3 736 aaPredicted RBP11.79□□□□□ -0.52
TTC39A-207ENST00000411642 BTBD7Q9P203 1132 aa11.79□□□□□ -0.52
TTC39A-207ENST00000411642 TRIM17Q9Y577 477 aa11.79□□□□□ -0.52
TTC39A-207ENST00000411642 FRMPD2Q68DX3 1309 aaPredicted RBP11.79□□□□□ -0.52
TTC39A-207ENST00000411642 VWA5AO00534 786 aa11.78□□□□□ -0.52
TTC39A-207ENST00000411642 SH2B2O14492 632 aaPredicted RBP11.78□□□□□ -0.52
TTC39A-207ENST00000411642 FMNL1O95466 1100 aaPredicted RBP11.78□□□□□ -0.52
TTC39A-207ENST00000411642 HMGB1P09429 215 aaKnown RBP11.78□□□□□ -0.52
TTC39A-207ENST00000411642 SNHG28P0DPA3 235 aa11.78□□□□□ -0.52
TTC39A-207ENST00000411642 CTGFP29279 349 aa11.78□□□□□ -0.52
TTC39A-207ENST00000411642 PSMC4P43686 418 aa11.78□□□□□ -0.52
TTC39A-207ENST00000411642 FCGRTP55899 365 aa11.78□□□□□ -0.52
TTC39A-207ENST00000411642 ZNF543Q08ER8 600 aa11.78□□□□□ -0.52
TTC39A-207ENST00000411642 ARHGEF6Q15052 776 aa11.78□□□□□ -0.52
TTC39A-207ENST00000411642 Q3C1V9 767 aa11.78□□□□□ -0.52
TTC39A-207ENST00000411642 COL13A1Q5TAT6 717 aaPredicted RBP11.78□□□□□ -0.52
TTC39A-207ENST00000411642 BLOC1S2Q6QNY1 142 aa11.78□□□□□ -0.52
TTC39A-207ENST00000411642 DHX32Q7L7V1 743 aaKnown RBP11.78□□□□□ -0.52
TTC39A-207ENST00000411642 OTOP1Q7RTM1 612 aa11.78□□□□□ -0.52
TTC39A-207ENST00000411642 FAM160B2Q86V87 743 aa11.78□□□□□ -0.52
TTC39A-207ENST00000411642 CHURC1Q8WUH1 139 aa11.78□□□□□ -0.52
TTC39A-207ENST00000411642 TRIM47Q96LD4 638 aa11.78□□□□□ -0.52
TTC39A-207ENST00000411642 EFCC1Q9HA90 598 aa11.78□□□□□ -0.52
TTC39A-207ENST00000411642 LY9Q9HBG7 655 aa11.78□□□□□ -0.52
TTC39A-207ENST00000411642 GPCPD1Q9NPB8 672 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms