RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 KRT18P05783 430 aaKnown RBP6.46□□□□□ -1.38
LSM5-205ENST00000409952 NFICP08651 508 aa6.46□□□□□ -1.38
LSM5-205ENST00000409952 ERVK-24P63145 666 aa6.46□□□□□ -1.38
LSM5-205ENST00000409952 HNRNPUQ00839 825 aaKnown RBP eCLIP6.46□□□□□ -1.38
LSM5-205ENST00000409952 PABPC4Q13310 644 aaKnown RBP eCLIP6.46□□□□□ -1.387e-10■□□□□ 11.1
LSM5-205ENST00000409952 MAP7Q14244 749 aa6.46□□□□□ -1.38
LSM5-205ENST00000409952 MAP1SQ66K74 1059 aaPredicted RBP6.46□□□□□ -1.38
LSM5-205ENST00000409952 MRM1Q6IN84 353 aaKnown RBP6.46□□□□□ -1.38
LSM5-205ENST00000409952 EEPD1Q7L9B9 569 aa6.46□□□□□ -1.38
LSM5-205ENST00000409952 ZAR1Q86SH2 424 aa6.46□□□□□ -1.38
LSM5-205ENST00000409952 RNF180Q86T96 592 aa6.46□□□□□ -1.38
LSM5-205ENST00000409952 SHISA5Q8N114 240 aa6.46□□□□□ -1.38
LSM5-205ENST00000409952 SPATA9Q9BWV2 254 aa6.46□□□□□ -1.38
LSM5-205ENST00000409952 ZFP64Q9NPA5 681 aa6.46□□□□□ -1.38
LSM5-205ENST00000409952 WASHC2CQ9Y4E1 1318 aa6.46□□□□□ -1.38
LSM5-205ENST00000409952 TGFB1P01137 390 aa6.45□□□□□ -1.38
LSM5-205ENST00000409952 RXRBP28702 533 aa6.45□□□□□ -1.38
LSM5-205ENST00000409952 NTF4P34130 210 aa6.45□□□□□ -1.38
LSM5-205ENST00000409952 ADMP35318 185 aa6.45□□□□□ -1.38
LSM5-205ENST00000409952 HLTFQ14527 1009 aaKnown RBP eCLIP6.45□□□□□ -1.38
LSM5-205ENST00000409952 LRRC14Q15048 493 aa6.45□□□□□ -1.38
LSM5-205ENST00000409952 NFKBIBQ15653 356 aa6.45□□□□□ -1.38
LSM5-205ENST00000409952 WWC2Q6AWC2 1192 aa6.45□□□□□ -1.38
LSM5-205ENST00000409952 LLGL2Q6P1M3 1020 aa6.45□□□□□ -1.38
LSM5-205ENST00000409952 TTC6Q86TZ1 520 aa6.45□□□□□ -1.38
LSM5-205ENST00000409952 EVI5LQ96CN4 794 aa6.45□□□□□ -1.38
LSM5-205ENST00000409952 MFSD14AQ96MC6 490 aa6.45□□□□□ -1.38
LSM5-205ENST00000409952 MAPRE3Q9UPY8 281 aa6.45□□□□□ -1.38
LSM5-205ENST00000409952 PCDHB14Q9Y5E9 798 aa6.45□□□□□ -1.38
LSM5-205ENST00000409952 UPK3BL1B0FP48 263 aa6.44□□□□□ -1.38
LSM5-205ENST00000409952 UPK3BL2E5RIL1 263 aa6.44□□□□□ -1.38
LSM5-205ENST00000409952 DYNC1LI2O43237 492 aaPredicted RBP6.44□□□□□ -1.38
LSM5-205ENST00000409952 ADCY3O60266 1144 aa6.44□□□□□ -1.38
LSM5-205ENST00000409952 PPFIA4O75335 1185 aa6.44□□□□□ -1.38
LSM5-205ENST00000409952 ATE1O95260 518 aa6.44□□□□□ -1.38
LSM5-205ENST00000409952 RASGRP1O95267 797 aa6.44□□□□□ -1.38
LSM5-205ENST00000409952 NEFMP07197 916 aa6.44□□□□□ -1.38
LSM5-205ENST00000409952 SPINK2P20155 84 aa6.44□□□□□ -1.38
LSM5-205ENST00000409952 MCL1Q07820 350 aa6.44□□□□□ -1.38
LSM5-205ENST00000409952 NCAPHQ15003 741 aa6.44□□□□□ -1.38
LSM5-205ENST00000409952 AXDND1Q5T1B0 1012 aaPredicted RBP6.44□□□□□ -1.38
LSM5-205ENST00000409952 INTS5Q6P9B9 1019 aaKnown RBP6.44□□□□□ -1.38
LSM5-205ENST00000409952 RUFY4Q6ZNE9 571 aa6.44□□□□□ -1.38
LSM5-205ENST00000409952 LRRC47Q8N1G4 583 aaKnown RBP6.44□□□□□ -1.38
LSM5-205ENST00000409952 AFAP1L2Q8N4X5 818 aa6.44□□□□□ -1.38
LSM5-205ENST00000409952 UBR7Q8N806 425 aa6.44□□□□□ -1.38
LSM5-205ENST00000409952 ZBTB38Q8NAP3 1195 aaPredicted RBP6.44□□□□□ -1.38
LSM5-205ENST00000409952 ATL2Q8NHH9 583 aa6.44□□□□□ -1.38
LSM5-205ENST00000409952 GAL3ST3Q96A11 431 aa6.44□□□□□ -1.38
LSM5-205ENST00000409952 TM9SF2Q99805 663 aa6.44□□□□□ -1.38
LSM5-205ENST00000409952 SHTN1A0MZ66 631 aa6.43□□□□□ -1.38
LSM5-205ENST00000409952 IQCA1LA6NCM1 817 aa6.43□□□□□ -1.38
LSM5-205ENST00000409952 GSG1L2A8MUP6 293 aa6.43□□□□□ -1.38
LSM5-205ENST00000409952 COBLO75128 1261 aa6.43□□□□□ -1.38
LSM5-205ENST00000409952 SCGB1D2O95969 90 aa6.43□□□□□ -1.38
LSM5-205ENST00000409952 MYL1P05976 194 aa6.43□□□□□ -1.38
LSM5-205ENST00000409952 RAB6AP20340 208 aa6.43□□□□□ -1.38
LSM5-205ENST00000409952 GUCY2CP25092 1073 aa6.43□□□□□ -1.38
LSM5-205ENST00000409952 GUCY2FP51841 1108 aa6.43□□□□□ -1.38
LSM5-205ENST00000409952 LRRFIP1Q32MZ4 808 aaKnown RBP6.43□□□□□ -1.38
LSM5-205ENST00000409952 SAMD3Q8N6K7 520 aa6.43□□□□□ -1.38
LSM5-205ENST00000409952 RNF214Q8ND24 703 aa6.43□□□□□ -1.38
LSM5-205ENST00000409952 KIF2CQ99661 725 aa6.43□□□□□ -1.38
LSM5-205ENST00000409952 KRTAP4-7Q9BYR0 210 aa6.43□□□□□ -1.38
LSM5-205ENST00000409952 EPN3Q9H201 632 aa6.43□□□□□ -1.38
LSM5-205ENST00000409952 ARNT2Q9HBZ2 717 aa6.43□□□□□ -1.38
LSM5-205ENST00000409952 SLC12A7Q9Y666 1083 aa6.43□□□□□ -1.38
LSM5-205ENST00000409952 MEIS3P2A8K0S8 358 aa6.42□□□□□ -1.38
LSM5-205ENST00000409952 WDR64B1ANS9 1081 aa6.42□□□□□ -1.38
LSM5-205ENST00000409952 CPEP16870 476 aa6.42□□□□□ -1.38
LSM5-205ENST00000409952 ATF3P18847 181 aa6.42□□□□□ -1.38
LSM5-205ENST00000409952 RPL6Q02878 288 aaKnown RBP6.42□□□□□ -1.38
LSM5-205ENST00000409952 PTPN11Q06124 597 aaPredicted RBP6.42□□□□□ -1.38
LSM5-205ENST00000409952 SAFB2Q14151 953 aaKnown RBP eCLIP6.42□□□□□ -1.38
LSM5-205ENST00000409952 TTLL4Q14679 1199 aa6.42□□□□□ -1.38
LSM5-205ENST00000409952 CBX2Q14781 532 aaPredicted RBP6.42□□□□□ -1.38
LSM5-205ENST00000409952 LRRC41Q15345 812 aa6.42□□□□□ -1.38
LSM5-205ENST00000409952 SLC10A6Q3KNW5 377 aa6.42□□□□□ -1.38
LSM5-205ENST00000409952 DTX1Q86Y01 620 aa6.42□□□□□ -1.38
LSM5-205ENST00000409952 SMYD4Q8IYR2 804 aaPredicted RBP6.42□□□□□ -1.38
LSM5-205ENST00000409952 TAB3Q8N5C8 712 aaPredicted RBP6.42□□□□□ -1.38
LSM5-205ENST00000409952 RIN3Q8TB24 985 aa6.42□□□□□ -1.38
LSM5-205ENST00000409952 METTL22Q9BUU2 404 aaPredicted RBP6.42□□□□□ -1.38
LSM5-205ENST00000409952 CBX8Q9HC52 389 aa6.42□□□□□ -1.38
LSM5-205ENST00000409952 PIM2Q9P1W9 311 aa6.42□□□□□ -1.38
LSM5-205ENST00000409952 POLR3KQ9Y2Y1 108 aaPredicted RBP6.42□□□□□ -1.38
LSM5-205ENST00000409952 PLD2O14939 933 aa6.41□□□□□ -1.38
LSM5-205ENST00000409952 SH3BP5O60239 455 aa6.41□□□□□ -1.38
LSM5-205ENST00000409952 FOSL1P15407 271 aa6.41□□□□□ -1.38
LSM5-205ENST00000409952 PAX3P23760 479 aa6.41□□□□□ -1.38
LSM5-205ENST00000409952 BRD3Q15059 726 aa6.41□□□□□ -1.38
LSM5-205ENST00000409952 VPS72Q15906 364 aa6.41□□□□□ -1.38
LSM5-205ENST00000409952 MSMPQ1L6U9 139 aa6.41□□□□□ -1.38
LSM5-205ENST00000409952 FNDC3BQ53EP0 1204 aaKnown RBP6.41□□□□□ -1.38
LSM5-205ENST00000409952 OGFOD3Q6PK18 319 aa6.41□□□□□ -1.38
LSM5-205ENST00000409952 VHLLQ6RSH7 139 aa6.41□□□□□ -1.38
LSM5-205ENST00000409952 MYO1HQ8N1T3 1032 aa6.41□□□□□ -1.38
LSM5-205ENST00000409952 ISL2Q96A47 359 aa6.41□□□□□ -1.38
LSM5-205ENST00000409952 SLC39A13Q96H72 371 aa6.41□□□□□ -1.38
LSM5-205ENST00000409952 MPHOSPH6Q99547 160 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms