RNA–Protein interactions for RNA: ENST00000409767.5

PBRM1-207, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-207ENST00000409767 TTC38Q5R3I4 469 aa7.12□□□□□ -1.27
PBRM1-207ENST00000409767 CNNM4Q6P4Q7 775 aa7.12□□□□□ -1.27
PBRM1-207ENST00000409767 GIMAP6Q6P9H5 292 aa7.12□□□□□ -1.27
PBRM1-207ENST00000409767 MIGA2Q7L4E1 593 aa7.12□□□□□ -1.27
PBRM1-207ENST00000409767 PNMA1Q8ND90 353 aa7.12□□□□□ -1.27
PBRM1-207ENST00000409767 OTUD7AQ8TE49 926 aaPredicted RBP7.12□□□□□ -1.27
PBRM1-207ENST00000409767 DEFB129Q9H1M3 183 aa7.12□□□□□ -1.27
PBRM1-207ENST00000409767 ADD3Q9UEY8 706 aaKnown RBP7.12□□□□□ -1.27
PBRM1-207ENST00000409767 ZHX2Q9Y6X8 837 aa7.12□□□□□ -1.27
PBRM1-207ENST00000409767 CFBP00751 764 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 CYLC1P35663 651 aaPredicted RBP7.11□□□□□ -1.27
PBRM1-207ENST00000409767 NCAPG2Q86XI2 1143 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 KIFC2Q96AC6 838 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.11□□□□□ -1.27
PBRM1-207ENST00000409767 DNM3Q9UQ16 869 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 FRMD4BQ9Y2L6 1034 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 CEMIPQ8WUJ3 1361 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 KDM3AQ9Y4C1 1321 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 BIN1O00499 593 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 FKTNO75072 461 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 TTLL1O95922 423 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 PTPN12Q05209 780 aaKnown RBP7.11□□□□□ -1.27
PBRM1-207ENST00000409767 ANO1Q5XXA6 986 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 FAM160B2Q86V87 743 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 DDX12PQ92771 950 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 PUS3Q9BZE2 481 aaKnown RBP7.11□□□□□ -1.27
PBRM1-207ENST00000409767 MTIF3Q9H2K0 278 aaKnown RBP7.11□□□□□ -1.27
PBRM1-207ENST00000409767 PUF60Q9UHX1 559 aaKnown RBP7.11□□□□□ -1.27
PBRM1-207ENST00000409767 DBNLQ9UJU6 430 aaKnown RBP7.11□□□□□ -1.27
PBRM1-207ENST00000409767 ADCY9O60503 1353 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 ADD2P35612 726 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 SLFN12Q8IYM2 578 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 SYNCQ9H7C4 482 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 USP17L5A8MUK1 530 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 YBX3P16989 372 aaKnown RBP eCLIP7.11□□□□□ -1.27
PBRM1-207ENST00000409767 GBP2P32456 591 aaPredicted RBP7.11□□□□□ -1.27
PBRM1-207ENST00000409767 POLA2Q14181 598 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 PIK3AP1Q6ZUJ8 805 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 SKAP1Q86WV1 359 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 EXOC8Q8IYI6 725 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 FANCBQ8NB91 859 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 DPF3Q92784 378 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 CDHR1Q96JP9 859 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 JPH2Q9BR39 696 aaPredicted RBP7.11□□□□□ -1.27
PBRM1-207ENST00000409767 AMNQ9BXJ7 453 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 NAA15Q9BXJ9 866 aaKnown RBP7.11□□□□□ -1.27
PBRM1-207ENST00000409767 AP5M1Q9H0R1 490 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 LRWD1Q9UFC0 647 aa7.11□□□□□ -1.27
PBRM1-207ENST00000409767 NWD2Q9ULI1 1742 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 ABCC12Q96J65 1359 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 AKR1B10O60218 316 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 CCNT1O60563 726 aaKnown RBP7.1□□□□□ -1.27
PBRM1-207ENST00000409767 FLOT1O75955 427 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 NEFHP12036 1026 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 RXRAP19793 462 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 CTNNA2P26232 953 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 PTGER2P43116 358 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 SLC8A3P57103 927 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 ARHGEF16Q5VV41 709 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 ANKRD35Q8N283 1001 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 FNBP1Q96RU3 617 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 PSTPIP2Q9H939 334 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 SMCO2A6NFE2 343 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 KLRF2D3W0D1 207 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 EIF3JO75822 258 aaKnown RBP7.1□□□□□ -1.27
PBRM1-207ENST00000409767 FGAP02671 866 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 SYT1P21579 422 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 ACTN2P35609 894 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 HDLBPQ00341 1268 aaKnown RBP7.1□□□□□ -1.27
PBRM1-207ENST00000409767 SETQ01105 290 aaPredicted RBP7.1□□□□□ -1.27
PBRM1-207ENST00000409767 ZNF174Q15697 407 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 CALCRLQ16602 461 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 FAM200AQ8TCP9 573 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 LMBR1Q8WVP7 490 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 PLA2G12BQ9BX93 195 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 TRIM17Q9Y577 477 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 TNKSO95271 1327 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 CALUO43852 315 aaPredicted RBP7.1□□□□□ -1.27
PBRM1-207ENST00000409767 PPFIA3O75145 1194 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 EPB41P11171 864 aaKnown RBP7.1□□□□□ -1.27
PBRM1-207ENST00000409767 DNM1Q05193 864 aaKnown RBP7.1□□□□□ -1.27
PBRM1-207ENST00000409767 CDCA5Q96FF9 252 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 MAP7D2Q96T17 732 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 ZNF70Q9UC06 446 aaPredicted RBP7.1□□□□□ -1.27
PBRM1-207ENST00000409767 SERPINA10Q9UK55 444 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 ZBTB21Q9ULJ3 1066 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 VWA3AA6NCI4 1184 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 TUBB4AP04350 444 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 ALAS1P13196 640 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 FAM160A1Q05DH4 1040 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 BMS1Q14692 1282 aaKnown RBP7.1□□□□□ -1.27
PBRM1-207ENST00000409767 TAF12Q16514 161 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 FAM47AQ5JRC9 791 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 WDR44Q5JSH3 913 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 KRT40Q6A162 431 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 HOOK3Q86VS8 718 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 TTC14Q96N46 770 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 SLC4A9Q96Q91 983 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 MLXIPQ9HAP2 919 aa7.1□□□□□ -1.27
PBRM1-207ENST00000409767 GDPD2Q9HCC8 539 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms