RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 SDR42E1Q8WUS8 393 aa11.08□□□□□ -0.64
NIF3L1-203ENST00000409129 PPM1EQ8WY54 764 aa11.08□□□□□ -0.64
NIF3L1-203ENST00000409129 SENP6Q9GZR1 1112 aaPredicted RBP11.08□□□□□ -0.64
NIF3L1-203ENST00000409129 BCL11AQ9H165 835 aa11.08□□□□□ -0.64
NIF3L1-203ENST00000409129 ZBTB40Q9NUA8 1239 aa11.08□□□□□ -0.64
NIF3L1-203ENST00000409129 HOXC10Q9NYD6 342 aa11.08□□□□□ -0.64
NIF3L1-203ENST00000409129 FLRT1Q9NZU1 646 aa11.08□□□□□ -0.64
NIF3L1-203ENST00000409129 DDX19BQ9UMR2 479 aa11.08□□□□□ -0.64
NIF3L1-203ENST00000409129 IVNS1ABPQ9Y6Y0 642 aa11.08□□□□□ -0.64
NIF3L1-203ENST00000409129 CYP2D6P10635 497 aa11.07□□□□□ -0.64
NIF3L1-203ENST00000409129 ATP2B2Q01814 1243 aa11.07□□□□□ -0.64
NIF3L1-203ENST00000409129 GRB14Q14449 540 aa11.07□□□□□ -0.64
NIF3L1-203ENST00000409129 ADAMTS19Q8TE59 1207 aa11.07□□□□□ -0.64
NIF3L1-203ENST00000409129 NECAB3Q96P71 396 aaPredicted RBP11.07□□□□□ -0.64
NIF3L1-203ENST00000409129 ARMT1Q9H993 441 aa11.07□□□□□ -0.64
NIF3L1-203ENST00000409129 PAG1Q9NWQ8 432 aa11.07□□□□□ -0.64
NIF3L1-203ENST00000409129 SWAP70Q9UH65 585 aa11.07□□□□□ -0.64
NIF3L1-203ENST00000409129 COG6Q9Y2V7 657 aa11.07□□□□□ -0.64
NIF3L1-203ENST00000409129 SMCHD1A6NHR9 2005 aa11.07□□□□□ -0.64
NIF3L1-203ENST00000409129 MUC6Q6W4X9 2439 aa11.06□□□□□ -0.64
NIF3L1-203ENST00000409129 CHD9Q3L8U1 2897 aa11.06□□□□□ -0.64
NIF3L1-203ENST00000409129 PRKAB2O43741 272 aa11.06□□□□□ -0.64
NIF3L1-203ENST00000409129 STRNO43815 780 aa11.06□□□□□ -0.64
NIF3L1-203ENST00000409129 ATP5JP18859 108 aa11.06□□□□□ -0.64
NIF3L1-203ENST00000409129 ADD2P35612 726 aa11.06□□□□□ -0.64
NIF3L1-203ENST00000409129 RTP1P59025 263 aa11.06□□□□□ -0.64
NIF3L1-203ENST00000409129 TMEM179Q6ZVK1 233 aa11.06□□□□□ -0.64
NIF3L1-203ENST00000409129 SIAH1Q8IUQ4 282 aa11.06□□□□□ -0.64
NIF3L1-203ENST00000409129 SLC44A5Q8NCS7 719 aa11.06□□□□□ -0.64
NIF3L1-203ENST00000409129 NPLOC4Q8TAT6 608 aa11.06□□□□□ -0.64
NIF3L1-203ENST00000409129 BADQ92934 168 aa11.06□□□□□ -0.64
NIF3L1-203ENST00000409129 DYNLL2Q96FJ2 89 aa11.06□□□□□ -0.64
NIF3L1-203ENST00000409129 MOV10L1Q9BXT6 1211 aaKnown RBP11.06□□□□□ -0.64
NIF3L1-203ENST00000409129 TANGO6Q9C0B7 1094 aa11.06□□□□□ -0.64
NIF3L1-203ENST00000409129 BOLA2Q9H3K6 86 aa11.06□□□□□ -0.64
NIF3L1-203ENST00000409129 CHMP4BQ9H444 224 aaKnown RBP11.06□□□□□ -0.64
NIF3L1-203ENST00000409129 PRDM5Q9NQX1 630 aaPredicted RBP11.06□□□□□ -0.64
NIF3L1-203ENST00000409129 ATP8A2Q9NTI2 1148 aa11.06□□□□□ -0.64
NIF3L1-203ENST00000409129 PCDHB8Q9UN66 801 aa11.06□□□□□ -0.64
NIF3L1-203ENST00000409129 PCDHB13Q9Y5F0 798 aa11.06□□□□□ -0.64
NIF3L1-203ENST00000409129 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.05□□□□□ -0.64
NIF3L1-203ENST00000409129 MSCO60682 206 aa11.05□□□□□ -0.64
NIF3L1-203ENST00000409129 MBD4O95243 580 aa11.05□□□□□ -0.64
NIF3L1-203ENST00000409129 IGHA2P01877 340 aa11.05□□□□□ -0.64
NIF3L1-203ENST00000409129 CNGA1P29973 690 aa11.05□□□□□ -0.64
NIF3L1-203ENST00000409129 CYP2C19P33261 490 aa11.05□□□□□ -0.64
NIF3L1-203ENST00000409129 SMAD3P84022 425 aaKnown RBP11.05□□□□□ -0.64
NIF3L1-203ENST00000409129 SLFNL1Q499Z3 407 aa11.05□□□□□ -0.64
NIF3L1-203ENST00000409129 KIAA1755Q5JYT7 1200 aa11.05□□□□□ -0.64
NIF3L1-203ENST00000409129 DPP9Q86TI2 863 aa11.05□□□□□ -0.64
NIF3L1-203ENST00000409129 SHCBP1Q8NEM2 672 aa11.05□□□□□ -0.64
NIF3L1-203ENST00000409129 LPAR1Q92633 364 aa11.05□□□□□ -0.64
NIF3L1-203ENST00000409129 ZFP91Q96JP5 570 aaPredicted RBP11.05□□□□□ -0.64
NIF3L1-203ENST00000409129 HAUS7Q99871 368 aa11.05□□□□□ -0.64
NIF3L1-203ENST00000409129 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.05□□□□□ -0.64
NIF3L1-203ENST00000409129 SPATC1LQ9H0A9 340 aa11.05□□□□□ -0.64
NIF3L1-203ENST00000409129 DDX20Q9UHI6 824 aaKnown RBP11.05□□□□□ -0.64
NIF3L1-203ENST00000409129 ATP11BQ9Y2G3 1177 aa11.05□□□□□ -0.64
NIF3L1-203ENST00000409129 TMX2Q9Y320 296 aa11.05□□□□□ -0.64
NIF3L1-203ENST00000409129 XIRP2A4UGR9 3374 aa11.05□□□□□ -0.64
NIF3L1-203ENST00000409129 AKR1B1P15121 316 aa11.04□□□□□ -0.64
NIF3L1-203ENST00000409129 ERCC3P19447 782 aa11.04□□□□□ -0.64
NIF3L1-203ENST00000409129 ADORA2AP29274 412 aa11.04□□□□□ -0.64
NIF3L1-203ENST00000409129 CDK8P49336 464 aa11.04□□□□□ -0.64
NIF3L1-203ENST00000409129 EPHB4P54760 987 aa11.04□□□□□ -0.64
NIF3L1-203ENST00000409129 UBE3CQ15386 1083 aa11.04□□□□□ -0.64
NIF3L1-203ENST00000409129 C12orf60Q5U649 245 aa11.04□□□□□ -0.64
NIF3L1-203ENST00000409129 OLFML2BQ68BL8 750 aa11.04□□□□□ -0.64
NIF3L1-203ENST00000409129 SH3RF1Q7Z6J0 888 aa11.04□□□□□ -0.64
NIF3L1-203ENST00000409129 MB21D1Q8N884 522 aa11.04□□□□□ -0.64
NIF3L1-203ENST00000409129 TRPV1Q8NER1 839 aa11.04□□□□□ -0.64
NIF3L1-203ENST00000409129 KIF12Q96FN5 646 aa11.04□□□□□ -0.64
NIF3L1-203ENST00000409129 CCDC17Q96LX7 622 aa11.04□□□□□ -0.64
NIF3L1-203ENST00000409129 UHRF1Q96T88 793 aaPredicted RBP11.04□□□□□ -0.64
NIF3L1-203ENST00000409129 SH2D4AQ9H788 454 aa11.04□□□□□ -0.64
NIF3L1-203ENST00000409129 ARHGEF10LQ9HCE6 1279 aa11.04□□□□□ -0.64
NIF3L1-203ENST00000409129 NAV1Q8NEY1 1877 aa11.04□□□□□ -0.64
NIF3L1-203ENST00000409129 CHD7Q9P2D1 2997 aa11.04□□□□□ -0.64
NIF3L1-203ENST00000409129 PIEZO1Q92508 2521 aa11.03□□□□□ -0.64
NIF3L1-203ENST00000409129 CYP2D7A0A087X1C5 515 aa11.03□□□□□ -0.64
NIF3L1-203ENST00000409129 USP17L12C9JPN9 530 aa11.03□□□□□ -0.64
NIF3L1-203ENST00000409129 USP17L21D6R901 530 aa11.03□□□□□ -0.64
NIF3L1-203ENST00000409129 MAP3K13O43283 966 aa11.03□□□□□ -0.64
NIF3L1-203ENST00000409129 COBLO75128 1261 aa11.03□□□□□ -0.64
NIF3L1-203ENST00000409129 FLOT1O75955 427 aa11.03□□□□□ -0.64
NIF3L1-203ENST00000409129 CYBAP13498 195 aa11.03□□□□□ -0.64
NIF3L1-203ENST00000409129 ICA1Q05084 483 aa11.03□□□□□ -0.64
NIF3L1-203ENST00000409129 PLS1Q14651 629 aa11.03□□□□□ -0.64
NIF3L1-203ENST00000409129 CLEC10AQ8IUN9 316 aa11.03□□□□□ -0.64
NIF3L1-203ENST00000409129 AMOTL1Q8IY63 956 aa11.03□□□□□ -0.64
NIF3L1-203ENST00000409129 SPICE1Q8N0Z3 855 aa11.03□□□□□ -0.64
NIF3L1-203ENST00000409129 DCBLD2Q96PD2 775 aa11.03□□□□□ -0.64
NIF3L1-203ENST00000409129 MROH8Q9H579 483 aa11.03□□□□□ -0.64
NIF3L1-203ENST00000409129 VCPKMTQ9H867 229 aa11.03□□□□□ -0.64
NIF3L1-203ENST00000409129 PLSCR2Q9NRY7 297 aa11.03□□□□□ -0.64
NIF3L1-203ENST00000409129 SLC5A4Q9NY91 659 aa11.03□□□□□ -0.64
NIF3L1-203ENST00000409129 PRKAG2Q9UGJ0 569 aa11.03□□□□□ -0.64
NIF3L1-203ENST00000409129 ZNFX1Q9P2E3 1918 aaKnown RBP11.03□□□□□ -0.64
NIF3L1-203ENST00000409129 SMIM22K7EJ46 135 aa11.02□□□□□ -0.65
NIF3L1-203ENST00000409129 DNM1LO00429 736 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms