RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 MORC2Q9Y6X9 1032 aaPredicted RBP11.31□□□□□ -0.6
POLR1A-202ENST00000409024 V9GY48 417 aaPredicted RBP11.31□□□□□ -0.6
POLR1A-202ENST00000409024 CNTNAP5Q8WYK1 1306 aa11.31□□□□□ -0.6
POLR1A-202ENST00000409024 GREB1LQ9C091 1923 aaPredicted RBP11.31□□□□□ -0.6
POLR1A-202ENST00000409024 LETM1O95202 739 aaPredicted RBP11.3□□□□□ -0.6
POLR1A-202ENST00000409024 SCG2P13521 617 aa11.3□□□□□ -0.6
POLR1A-202ENST00000409024 CALML3P27482 149 aa11.3□□□□□ -0.6
POLR1A-202ENST00000409024 GMPSP49915 693 aaPredicted RBP11.3□□□□□ -0.6
POLR1A-202ENST00000409024 CACNB3P54284 484 aa11.3□□□□□ -0.6
POLR1A-202ENST00000409024 GSE1Q14687 1217 aa11.3□□□□□ -0.6
POLR1A-202ENST00000409024 PKN1Q16512 942 aa11.3□□□□□ -0.6
POLR1A-202ENST00000409024 ABCB5Q2M3G0 1257 aa11.3□□□□□ -0.6
POLR1A-202ENST00000409024 MYSM1Q5VVJ2 828 aa11.3□□□□□ -0.6
POLR1A-202ENST00000409024 CST9Q5W186 159 aa11.3□□□□□ -0.6
POLR1A-202ENST00000409024 LEO1Q8WVC0 666 aaPredicted RBP11.3□□□□□ -0.6
POLR1A-202ENST00000409024 PHF20Q9BVI0 1012 aa11.3□□□□□ -0.6
POLR1A-202ENST00000409024 DNAJC18Q9H819 358 aa11.3□□□□□ -0.6
POLR1A-202ENST00000409024 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.3□□□□□ -0.6
POLR1A-202ENST00000409024 CNOT7Q9UIV1 285 aaKnown RBP11.3□□□□□ -0.6
POLR1A-202ENST00000409024 THSD7BQ9C0I4 1608 aa11.3□□□□□ -0.6
POLR1A-202ENST00000409024 TCP10L2B9ZVM9 353 aa11.29□□□□□ -0.6
POLR1A-202ENST00000409024 KLRF2D3W0D1 207 aa11.29□□□□□ -0.6
POLR1A-202ENST00000409024 FIBPO43427 364 aa11.29□□□□□ -0.6
POLR1A-202ENST00000409024 PLEKHA8P1O95397 391 aa11.29□□□□□ -0.6
POLR1A-202ENST00000409024 NASPP49321 788 aaPredicted RBP11.29□□□□□ -0.6
POLR1A-202ENST00000409024 FMR1Q06787 632 aaKnown RBP eCLIP11.29□□□□□ -0.6
POLR1A-202ENST00000409024 GNL2Q13823 731 aaKnown RBP11.29□□□□□ -0.6
POLR1A-202ENST00000409024 RILPL1Q5EBL4 403 aa11.29□□□□□ -0.6
POLR1A-202ENST00000409024 TEX2Q8IWB9 1127 aa11.29□□□□□ -0.6
POLR1A-202ENST00000409024 MICALL2Q8IY33 904 aa11.29□□□□□ -0.6
POLR1A-202ENST00000409024 GMCL1P1Q8NEA9 526 aa11.29□□□□□ -0.6
POLR1A-202ENST00000409024 CCDC148Q8NFR7 591 aa11.29□□□□□ -0.6
POLR1A-202ENST00000409024 KCNG4Q8TDN1 519 aa11.29□□□□□ -0.6
POLR1A-202ENST00000409024 CCDC12Q8WUD4 166 aaPredicted RBP11.29□□□□□ -0.6
POLR1A-202ENST00000409024 DCAF4Q8WV16 495 aa11.29□□□□□ -0.6
POLR1A-202ENST00000409024 RIOX1Q9H6W3 641 aa11.29□□□□□ -0.6
POLR1A-202ENST00000409024 CLIP2Q9UDT6 1046 aa11.29□□□□□ -0.6
POLR1A-202ENST00000409024 PGAP2Q9UHJ9 254 aa11.29□□□□□ -0.6
POLR1A-202ENST00000409024 PPP2R3BQ9Y5P8 575 aa11.29□□□□□ -0.6
POLR1A-202ENST00000409024 MYH8P13535 1937 aa11.29□□□□□ -0.6
POLR1A-202ENST00000409024 SIPA1L1O43166 1804 aa11.28□□□□□ -0.6
POLR1A-202ENST00000409024 CLRN2A0PK11 232 aa11.28□□□□□ -0.6
POLR1A-202ENST00000409024 GOLGA6L4A6NEF3 574 aa11.28□□□□□ -0.6
POLR1A-202ENST00000409024 MPHOSPH10O00566 681 aaKnown RBP11.28□□□□□ -0.6
POLR1A-202ENST00000409024 BMP15O95972 392 aa11.28□□□□□ -0.6
POLR1A-202ENST00000409024 PDHBP11177 359 aa11.28□□□□□ -0.6
POLR1A-202ENST00000409024 LMOD1P29536 600 aaPredicted RBP11.28□□□□□ -0.6
POLR1A-202ENST00000409024 GUCY1A2P33402 732 aa11.28□□□□□ -0.6
POLR1A-202ENST00000409024 KRT2P35908 639 aa11.28□□□□□ -0.6
POLR1A-202ENST00000409024 GUCY1B3Q02153 619 aa11.28□□□□□ -0.6
POLR1A-202ENST00000409024 APOBEC3FQ8IUX4 373 aaKnown RBP11.28□□□□□ -0.6
POLR1A-202ENST00000409024 NOSTRINQ8IVI9 506 aa11.28□□□□□ -0.6
POLR1A-202ENST00000409024 DAGLBQ8NCG7 672 aa11.28□□□□□ -0.6
POLR1A-202ENST00000409024 GPT2Q8TD30 523 aa11.28□□□□□ -0.6
POLR1A-202ENST00000409024 RRP36Q96EU6 259 aaKnown RBP11.28□□□□□ -0.6
POLR1A-202ENST00000409024 VEZTQ9HBM0 779 aa11.28□□□□□ -0.6
POLR1A-202ENST00000409024 DTNBO60941 627 aa11.27□□□□□ -0.61
POLR1A-202ENST00000409024 TRAPPC10P48553 1259 aa11.27□□□□□ -0.61
POLR1A-202ENST00000409024 ZNF543Q08ER8 600 aa11.27□□□□□ -0.61
POLR1A-202ENST00000409024 TRAF1Q13077 416 aa11.27□□□□□ -0.61
POLR1A-202ENST00000409024 KIF4BQ2VIQ3 1234 aa11.27□□□□□ -0.61
POLR1A-202ENST00000409024 NBPF9Q3BBW0 867 aa11.27□□□□□ -0.61
POLR1A-202ENST00000409024 FOXD4L6Q3SYB3 417 aaPredicted RBP11.27□□□□□ -0.61
POLR1A-202ENST00000409024 OTUD7BQ6GQQ9 843 aa11.27□□□□□ -0.61
POLR1A-202ENST00000409024 FOXD4L3Q6VB84 417 aaPredicted RBP11.27□□□□□ -0.61
POLR1A-202ENST00000409024 SAPCD2Q86UD0 394 aa11.27□□□□□ -0.61
POLR1A-202ENST00000409024 DIS3L2Q8IYB7 885 aaKnown RBP11.27□□□□□ -0.61
POLR1A-202ENST00000409024 STAG2Q8N3U4 1231 aa11.27□□□□□ -0.61
POLR1A-202ENST00000409024 CCDC82Q8N4S0 544 aa11.27□□□□□ -0.61
POLR1A-202ENST00000409024 LINC00301Q8NCQ3 95 aa11.27□□□□□ -0.61
POLR1A-202ENST00000409024 GMCL1Q96IK5 515 aa11.27□□□□□ -0.61
POLR1A-202ENST00000409024 HHIPL1Q96JK4 782 aa11.27□□□□□ -0.61
POLR1A-202ENST00000409024 AIFM3Q96NN9 605 aa11.27□□□□□ -0.61
POLR1A-202ENST00000409024 SH2D4AQ9H788 454 aa11.27□□□□□ -0.61
POLR1A-202ENST00000409024 ARHGEF10LQ9HCE6 1279 aa11.27□□□□□ -0.61
POLR1A-202ENST00000409024 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.27□□□□□ -0.61
POLR1A-202ENST00000409024 GPRC5DQ9NZD1 345 aa11.27□□□□□ -0.61
POLR1A-202ENST00000409024 TFIP11Q9UBB9 837 aaKnown RBP11.27□□□□□ -0.61
POLR1A-202ENST00000409024 SEC63Q9UGP8 760 aaKnown RBP11.27□□□□□ -0.61
POLR1A-202ENST00000409024 CEP131Q9UPN4 1083 aa11.27□□□□□ -0.61
POLR1A-202ENST00000409024 GJA3Q9Y6H8 435 aa11.27□□□□□ -0.61
POLR1A-202ENST00000409024 PITPNM2Q9BZ72 1349 aa11.27□□□□□ -0.61
POLR1A-202ENST00000409024 A0A1W2PQ27 194 aa11.26□□□□□ -0.61
POLR1A-202ENST00000409024 A0A1W2PQ64 194 aa11.26□□□□□ -0.61
POLR1A-202ENST00000409024 A0A1W2PQD8 194 aa11.26□□□□□ -0.61
POLR1A-202ENST00000409024 ESYT2A0FGR8 921 aa11.26□□□□□ -0.61
POLR1A-202ENST00000409024 TRAF5O00463 557 aa11.26□□□□□ -0.61
POLR1A-202ENST00000409024 PPP6R2O75170 966 aa11.26□□□□□ -0.61
POLR1A-202ENST00000409024 ASNSP08243 561 aa11.26□□□□□ -0.61
POLR1A-202ENST00000409024 EEF2P13639 858 aaKnown RBP11.26□□□□□ -0.61
POLR1A-202ENST00000409024 NLRP5P59047 1200 aa11.26□□□□□ -0.61
POLR1A-202ENST00000409024 ZNF445P59923 1031 aa11.26□□□□□ -0.61
POLR1A-202ENST00000409024 ICA1Q05084 483 aa11.26□□□□□ -0.61
POLR1A-202ENST00000409024 RASA3Q14644 834 aa11.26□□□□□ -0.61
POLR1A-202ENST00000409024 SLC39A14Q15043 492 aa11.26□□□□□ -0.61
POLR1A-202ENST00000409024 ANO1Q5XXA6 986 aa11.26□□□□□ -0.61
POLR1A-202ENST00000409024 DCAF15Q66K64 600 aa11.26□□□□□ -0.61
POLR1A-202ENST00000409024 PPP1R18Q6NYC8 613 aa11.26□□□□□ -0.61
POLR1A-202ENST00000409024 CMTR1Q8N1G2 835 aaKnown RBP11.26□□□□□ -0.61
POLR1A-202ENST00000409024 USP28Q96RU2 1077 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms