RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 PPP1R9AQ9ULJ8 1098 aa10.79□□□□□ -0.68
SNORD88A-201ENST00000408314 EVI5O60447 810 aa10.78□□□□□ -0.68
SNORD88A-201ENST00000408314 PEX10O60683 326 aa10.78□□□□□ -0.68
SNORD88A-201ENST00000408314 SLC34A2O95436 690 aa10.78□□□□□ -0.68
SNORD88A-201ENST00000408314 PCP11498 1178 aaKnown RBP10.78□□□□□ -0.68
SNORD88A-201ENST00000408314 ERCC3P19447 782 aa10.78□□□□□ -0.68
SNORD88A-201ENST00000408314 KCTD2Q14681 263 aa10.78□□□□□ -0.68
SNORD88A-201ENST00000408314 FAM83BQ5T0W9 1011 aa10.78□□□□□ -0.68
SNORD88A-201ENST00000408314 OLFML2BQ68BL8 750 aa10.78□□□□□ -0.68
SNORD88A-201ENST00000408314 SAMD1Q6SPF0 538 aaPredicted RBP10.78□□□□□ -0.68
SNORD88A-201ENST00000408314 CHD1LQ86WJ1 897 aa10.78□□□□□ -0.68
SNORD88A-201ENST00000408314 RIOX2Q8IUF8 465 aa10.78□□□□□ -0.68
SNORD88A-201ENST00000408314 SIAH1Q8IUQ4 282 aa10.78□□□□□ -0.68
SNORD88A-201ENST00000408314 PRPF38AQ8NAV1 312 aaKnown RBP10.78□□□□□ -0.68
SNORD88A-201ENST00000408314 MKL1Q969V6 931 aa10.78□□□□□ -0.68
SNORD88A-201ENST00000408314 SEC62Q99442 399 aaKnown RBP10.78□□□□□ -0.68
SNORD88A-201ENST00000408314 SLF1Q9BQI6 1058 aa10.78□□□□□ -0.68
SNORD88A-201ENST00000408314 NRBP1Q9UHY1 535 aa10.78□□□□□ -0.68
SNORD88A-201ENST00000408314 FEM1BQ9UK73 627 aa10.78□□□□□ -0.68
SNORD88A-201ENST00000408314 OGDHLQ9ULD0 1010 aa10.78□□□□□ -0.68
SNORD88A-201ENST00000408314 ADAMTS5Q9UNA0 930 aa10.78□□□□□ -0.68
SNORD88A-201ENST00000408314 ZMYM6O95789 1325 aa10.78□□□□□ -0.68
SNORD88A-201ENST00000408314 IGKV6D-41A0A0C4DH26 115 aa10.77□□□□□ -0.69
SNORD88A-201ENST00000408314 TSPY2A6NKD2 308 aa10.77□□□□□ -0.69
SNORD88A-201ENST00000408314 F5H6K3 240 aa10.77□□□□□ -0.69
SNORD88A-201ENST00000408314 VWA5AO00534 786 aa10.77□□□□□ -0.69
SNORD88A-201ENST00000408314 ZBED4O75132 1171 aa10.77□□□□□ -0.69
SNORD88A-201ENST00000408314 PRDM1O75626 825 aa10.77□□□□□ -0.69
SNORD88A-201ENST00000408314 NDUFB10O96000 172 aa10.77□□□□□ -0.69
SNORD88A-201ENST00000408314 ADORA2AP29274 412 aa10.77□□□□□ -0.69
SNORD88A-201ENST00000408314 KLRC3Q07444 240 aa10.77□□□□□ -0.69
SNORD88A-201ENST00000408314 CACNB2Q08289 660 aaPredicted RBP10.77□□□□□ -0.69
SNORD88A-201ENST00000408314 ALX1Q15699 326 aa10.77□□□□□ -0.69
SNORD88A-201ENST00000408314 MCMDC2Q4G0Z9 681 aa10.77□□□□□ -0.69
SNORD88A-201ENST00000408314 POTEEQ6S8J3 1075 aa10.77□□□□□ -0.69
SNORD88A-201ENST00000408314 STK11IPQ8N1F8 1099 aa10.77□□□□□ -0.69
SNORD88A-201ENST00000408314 GMCL1P1Q8NEA9 526 aa10.77□□□□□ -0.69
SNORD88A-201ENST00000408314 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.77□□□□□ -0.69
SNORD88A-201ENST00000408314 TEX13BQ9BXU2 312 aa10.77□□□□□ -0.69
SNORD88A-201ENST00000408314 OSBPL3Q9H4L5 887 aa10.77□□□□□ -0.69
SNORD88A-201ENST00000408314 C11orf49Q9H6J7 331 aa10.77□□□□□ -0.69
SNORD88A-201ENST00000408314 MTMR4Q9NYA4 1195 aa10.77□□□□□ -0.69
SNORD88A-201ENST00000408314 CLIP2Q9UDT6 1046 aa10.77□□□□□ -0.69
SNORD88A-201ENST00000408314 FBXO40Q9UH90 709 aa10.77□□□□□ -0.69
SNORD88A-201ENST00000408314 ANAPC4Q9UJX5 808 aa10.77□□□□□ -0.69
SNORD88A-201ENST00000408314 PARP14Q460N5 1801 aa10.77□□□□□ -0.69
SNORD88A-201ENST00000408314 RLFQ13129 1914 aa10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 H0YGN5 161 aa10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 SMIM22K7EJ46 135 aa10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 ORC4O43929 436 aa10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 STAT3P40763 770 aa10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 OAZ1P54368 228 aa10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 TFAP4Q01664 338 aa10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 NUCB1Q02818 461 aa10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 TRIM32Q13049 653 aa10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 TMEM132BQ14DG7 1078 aa10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 KIAA1755Q5JYT7 1200 aa10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 B4GALNT3Q6L9W6 998 aa10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 FAM160B2Q86V87 743 aa10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 CHURC1Q8WUH1 139 aa10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 RILPL2Q969X0 211 aa10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 CEP95Q96GE4 821 aa10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 PAWRQ96IZ0 340 aaKnown RBP10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 MMP19Q99542 508 aa10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 RNF41Q9H4P4 317 aaPredicted RBP10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 DIAPH3Q9NSV4 1193 aa10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 ISY1Q9ULR0 285 aaKnown RBP10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 DIS3Q9Y2L1 958 aaKnown RBP10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 BRCA2P51587 3418 aa10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 CCDC171Q6TFL3 1326 aa10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 CEP290O15078 2479 aa10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 MYH4Q9Y623 1939 aa10.76□□□□□ -0.69
SNORD88A-201ENST00000408314 MKI67P46013 3256 aaKnown RBP10.75□□□□□ -0.69
SNORD88A-201ENST00000408314 ATP2A1O14983 1001 aa10.75□□□□□ -0.69
SNORD88A-201ENST00000408314 RANBP6O60518 1105 aaKnown RBP10.75□□□□□ -0.69
SNORD88A-201ENST00000408314 BMP3P12645 472 aa10.75□□□□□ -0.69
SNORD88A-201ENST00000408314 CNGA1P29973 690 aa10.75□□□□□ -0.69
SNORD88A-201ENST00000408314 IKQ13123 557 aaPredicted RBP10.75□□□□□ -0.69
SNORD88A-201ENST00000408314 CCL14Q16627 93 aa10.75□□□□□ -0.69
SNORD88A-201ENST00000408314 SLFN13Q68D06 897 aa10.75□□□□□ -0.69
SNORD88A-201ENST00000408314 CCDC129Q6ZRS4 1044 aa10.75□□□□□ -0.69
SNORD88A-201ENST00000408314 MSL3Q8N5Y2 521 aaKnown RBP10.75□□□□□ -0.69
SNORD88A-201ENST00000408314 EXOC6Q8TAG9 804 aa10.75□□□□□ -0.69
SNORD88A-201ENST00000408314 GMCL1Q96IK5 515 aa10.75□□□□□ -0.69
SNORD88A-201ENST00000408314 TOMM22Q9NS69 142 aa10.75□□□□□ -0.69
SNORD88A-201ENST00000408314 DDX20Q9UHI6 824 aaKnown RBP10.75□□□□□ -0.69
SNORD88A-201ENST00000408314 ZNF214Q9UL59 606 aaPredicted RBP10.75□□□□□ -0.69
SNORD88A-201ENST00000408314 STX8Q9UNK0 236 aa10.75□□□□□ -0.69
SNORD88A-201ENST00000408314 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.75□□□□□ -0.69
SNORD88A-201ENST00000408314 A0A1W2PPC1 479 aa10.74□□□□□ -0.69
SNORD88A-201ENST00000408314 CYBAP13498 195 aa10.74□□□□□ -0.69
SNORD88A-201ENST00000408314 CCND3P30281 292 aaPredicted RBP10.74□□□□□ -0.69
SNORD88A-201ENST00000408314 SLC1A4P43007 532 aa10.74□□□□□ -0.69
SNORD88A-201ENST00000408314 STAT2P52630 851 aa10.74□□□□□ -0.69
SNORD88A-201ENST00000408314 NMIQ13287 307 aaPredicted RBP10.74□□□□□ -0.69
SNORD88A-201ENST00000408314 HABP4Q5JVS0 413 aaKnown RBP10.74□□□□□ -0.69
SNORD88A-201ENST00000408314 SNRNP48Q6IEG0 339 aaKnown RBP10.74□□□□□ -0.69
SNORD88A-201ENST00000408314 ARRDC4Q8NCT1 418 aa10.74□□□□□ -0.69
SNORD88A-201ENST00000408314 KIFC2Q96AC6 838 aa10.74□□□□□ -0.69
SNORD88A-201ENST00000408314 FBXO28Q9NVF7 368 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms