RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 HOXC6P09630 235 aa23■■□□□ 1.27
SMARCB1-204ENST00000407422 CAPN2P17655 700 aa23■■□□□ 1.27
SMARCB1-204ENST00000407422 TMEM132BQ14DG7 1078 aa23■■□□□ 1.27
SMARCB1-204ENST00000407422 NUP88Q99567 741 aaPredicted RBP23■■□□□ 1.27
SMARCB1-204ENST00000407422 RWDD1Q9H446 243 aaPredicted RBP23■■□□□ 1.27
SMARCB1-204ENST00000407422 NYAP2Q9P242 653 aa23■■□□□ 1.27
SMARCB1-204ENST00000407422 MNX1P50219 401 aaPredicted RBP22.99■■□□□ 1.27
SMARCB1-204ENST00000407422 PPARAQ07869 468 aa22.99■■□□□ 1.27
SMARCB1-204ENST00000407422 SHCBP1Q8NEM2 672 aa22.99■■□□□ 1.27
SMARCB1-204ENST00000407422 ZNF287Q9HBT7 754 aa22.99■■□□□ 1.27
SMARCB1-204ENST00000407422 CLIP2Q9UDT6 1046 aa22.99■■□□□ 1.27
SMARCB1-204ENST00000407422 OGDHLQ9ULD0 1010 aa22.99■■□□□ 1.27
SMARCB1-204ENST00000407422 ADAMTS5Q9UNA0 930 aa22.99■■□□□ 1.27
SMARCB1-204ENST00000407422 ZNF236Q9UL36 1845 aa22.98■■□□□ 1.27
SMARCB1-204ENST00000407422 TRIOBPQ9H2D6 2365 aa22.98■■□□□ 1.27
SMARCB1-204ENST00000407422 ADORA2AP29274 412 aa22.98■■□□□ 1.27
SMARCB1-204ENST00000407422 HABP4Q5JVS0 413 aaKnown RBP22.98■■□□□ 1.27
SMARCB1-204ENST00000407422 VPS53Q5VIR6 699 aa22.98■■□□□ 1.27
SMARCB1-204ENST00000407422 NCAPG2Q86XI2 1143 aa22.98■■□□□ 1.27
SMARCB1-204ENST00000407422 CEP95Q96GE4 821 aa22.98■■□□□ 1.27
SMARCB1-204ENST00000407422 F5H6K3 240 aa22.97■■□□□ 1.27
SMARCB1-204ENST00000407422 KLRC3Q07444 240 aa22.97■■□□□ 1.27
SMARCB1-204ENST00000407422 NECAB2Q7Z6G3 386 aa22.97■■□□□ 1.27
SMARCB1-204ENST00000407422 ANKLE1Q8NAG6 615 aa22.97■■□□□ 1.27
SMARCB1-204ENST00000407422 FAM227BQ96M60 508 aa22.97■■□□□ 1.27
SMARCB1-204ENST00000407422 PPP1R9AQ9ULJ8 1098 aa22.97■■□□□ 1.27
SMARCB1-204ENST00000407422 COLQQ9Y215 455 aaPredicted RBP22.97■■□□□ 1.27
SMARCB1-204ENST00000407422 VWA5AO00534 786 aa22.97■■□□□ 1.27
SMARCB1-204ENST00000407422 STRNO43815 780 aa22.97■■□□□ 1.27
SMARCB1-204ENST00000407422 NDUFB10O96000 172 aa22.97■■□□□ 1.27
SMARCB1-204ENST00000407422 PDE4BQ07343 736 aa22.97■■□□□ 1.27
SMARCB1-204ENST00000407422 FAM47AQ5JRC9 791 aa22.97■■□□□ 1.27
SMARCB1-204ENST00000407422 MFSD14CQ5VZR4 134 aa22.97■■□□□ 1.27
SMARCB1-204ENST00000407422 LHX8Q68G74 356 aa22.97■■□□□ 1.27
SMARCB1-204ENST00000407422 DPP9Q86TI2 863 aa22.97■■□□□ 1.27
SMARCB1-204ENST00000407422 MROH8Q9H579 483 aa22.97■■□□□ 1.27
SMARCB1-204ENST00000407422 MTMR4Q9NYA4 1195 aa22.97■■□□□ 1.27
SMARCB1-204ENST00000407422 FRMPD3Q5JV73 1810 aa22.96■■□□□ 1.27
SMARCB1-204ENST00000407422 COBLO75128 1261 aa22.96■■□□□ 1.27
SMARCB1-204ENST00000407422 CYP2C19P33261 490 aa22.96■■□□□ 1.27
SMARCB1-204ENST00000407422 INCENPQ9NQS7 918 aa22.96■■□□□ 1.27
SMARCB1-204ENST00000407422 SUPT16HQ9Y5B9 1047 aaKnown RBP22.96■■□□□ 1.27
SMARCB1-204ENST00000407422 A0A0D9SFI3 127 aa22.95■■□□□ 1.26
SMARCB1-204ENST00000407422 IGHA2P01877 340 aa22.95■■□□□ 1.26
SMARCB1-204ENST00000407422 TSPY3P0CV98 308 aa22.95■■□□□ 1.26
SMARCB1-204ENST00000407422 TSPY8P0CW00 308 aa22.95■■□□□ 1.26
SMARCB1-204ENST00000407422 CTDSPL2Q05D32 466 aa22.95■■□□□ 1.26
SMARCB1-204ENST00000407422 CHD1LQ86WJ1 897 aa22.95■■□□□ 1.26
SMARCB1-204ENST00000407422 MKL1Q969V6 931 aa22.95■■□□□ 1.26
SMARCB1-204ENST00000407422 HELLSQ9NRZ9 838 aa22.95■■□□□ 1.26
SMARCB1-204ENST00000407422 SZT2Q5T011 3432 aa22.94■■□□□ 1.26
SMARCB1-204ENST00000407422 SLC3A2P08195 630 aaKnown RBP22.94■■□□□ 1.26
SMARCB1-204ENST00000407422 TFAP4Q01664 338 aa22.94■■□□□ 1.26
SMARCB1-204ENST00000407422 LRRC47Q8N1G4 583 aaKnown RBP22.94■■□□□ 1.26
SMARCB1-204ENST00000407422 REPS2Q8NFH8 660 aa22.94■■□□□ 1.26
SMARCB1-204ENST00000407422 NEDD1Q8NHV4 660 aa22.94■■□□□ 1.26
SMARCB1-204ENST00000407422 NBPF3Q9H094 633 aa22.94■■□□□ 1.26
SMARCB1-204ENST00000407422 ZNF214Q9UL59 606 aaPredicted RBP22.94■■□□□ 1.26
SMARCB1-204ENST00000407422 PLIN4Q96Q06 1357 aa22.94■■□□□ 1.26
SMARCB1-204ENST00000407422 TRIM6-TRIM34B2RNG4 842 aa22.93■■□□□ 1.26
SMARCB1-204ENST00000407422 EVI5O60447 810 aa22.93■■□□□ 1.26
SMARCB1-204ENST00000407422 TTLL1O95922 423 aa22.93■■□□□ 1.26
SMARCB1-204ENST00000407422 NUCB1Q02818 461 aa22.93■■□□□ 1.26
SMARCB1-204ENST00000407422 TRPV1Q8NER1 839 aa22.93■■□□□ 1.26
SMARCB1-204ENST00000407422 SLF1Q9BQI6 1058 aa22.93■■□□□ 1.26
SMARCB1-204ENST00000407422 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.93■■□□□ 1.26
SMARCB1-204ENST00000407422 NR2E3Q9Y5X4 410 aa22.93■■□□□ 1.26
SMARCB1-204ENST00000407422 TACC3Q9Y6A5 838 aa22.93■■□□□ 1.26
SMARCB1-204ENST00000407422 SLC25A27O95847 323 aa22.93■■□□□ 1.26
SMARCB1-204ENST00000407422 STAT3P40763 770 aa22.93■■□□□ 1.26
SMARCB1-204ENST00000407422 RIOX2Q8IUF8 465 aa22.93■■□□□ 1.26
SMARCB1-204ENST00000407422 PLEKHM2Q8IWE5 1019 aa22.93■■□□□ 1.26
SMARCB1-204ENST00000407422 FCER1AP12319 257 aa22.92■■□□□ 1.26
SMARCB1-204ENST00000407422 NMIQ13287 307 aaPredicted RBP22.92■■□□□ 1.26
SMARCB1-204ENST00000407422 MCMDC2Q4G0Z9 681 aa22.92■■□□□ 1.26
SMARCB1-204ENST00000407422 OLFML2BQ68BL8 750 aa22.92■■□□□ 1.26
SMARCB1-204ENST00000407422 CHRDL2Q6WN34 429 aa22.92■■□□□ 1.26
SMARCB1-204ENST00000407422 ABRAQ8N0Z2 381 aa22.92■■□□□ 1.26
SMARCB1-204ENST00000407422 RILPL2Q969X0 211 aa22.92■■□□□ 1.26
SMARCB1-204ENST00000407422 C11orf49Q9H6J7 331 aa22.92■■□□□ 1.26
SMARCB1-204ENST00000407422 PLXNA1Q9UIW2 1896 aa22.92■■□□□ 1.26
SMARCB1-204ENST00000407422 LAMA3Q16787 3333 aa22.91■■□□□ 1.26
SMARCB1-204ENST00000407422 CNGA1P29973 690 aa22.91■■□□□ 1.26
SMARCB1-204ENST00000407422 ZNF589Q86UQ0 364 aaPredicted RBP22.91■■□□□ 1.26
SMARCB1-204ENST00000407422 CYBAP13498 195 aa22.9■■□□□ 1.26
SMARCB1-204ENST00000407422 GMCL1P1Q8NEA9 526 aa22.9■■□□□ 1.26
SMARCB1-204ENST00000407422 DDX20Q9UHI6 824 aaKnown RBP22.9■■□□□ 1.26
SMARCB1-204ENST00000407422 ANAPC4Q9UJX5 808 aa22.9■■□□□ 1.26
SMARCB1-204ENST00000407422 PFASO15067 1338 aa22.9■■□□□ 1.26
SMARCB1-204ENST00000407422 NMT2O60551 498 aa22.9■■□□□ 1.26
SMARCB1-204ENST00000407422 FGAP02671 866 aa22.9■■□□□ 1.26
SMARCB1-204ENST00000407422 PGK2P07205 417 aa22.9■■□□□ 1.26
SMARCB1-204ENST00000407422 ALX1Q15699 326 aa22.9■■□□□ 1.26
SMARCB1-204ENST00000407422 PRPF38AQ8NAV1 312 aaKnown RBP22.9■■□□□ 1.26
SMARCB1-204ENST00000407422 CHMP4CQ96CF2 233 aa22.9■■□□□ 1.26
SMARCB1-204ENST00000407422 MMP19Q99542 508 aa22.9■■□□□ 1.26
SMARCB1-204ENST00000407422 SYNPO2Q9UMS6 1093 aa22.9■■□□□ 1.26
SMARCB1-204ENST00000407422 SLFN13Q68D06 897 aa22.89■■□□□ 1.25
SMARCB1-204ENST00000407422 KIFC2Q96AC6 838 aa22.89■■□□□ 1.25
SMARCB1-204ENST00000407422 MAML3Q96JK9 1138 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms