RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 ABCB5Q2M3G0 1257 aa29.5■■■□□ 2.31
CPNE1-205ENST00000401607 ADALQ6DHV7 355 aa29.5■■■□□ 2.31
CPNE1-205ENST00000401607 FHDC1Q9C0D6 1143 aaPredicted RBP29.5■■■□□ 2.31
CPNE1-205ENST00000401607 GRPEL1Q9HAV7 217 aa29.5■■■□□ 2.31
CPNE1-205ENST00000401607 NR1I2O75469 434 aa29.49■■■□□ 2.31
CPNE1-205ENST00000401607 EGFRP00533 1210 aa29.49■■■□□ 2.31
CPNE1-205ENST00000401607 EEF2P13639 858 aaKnown RBP29.49■■■□□ 2.31
CPNE1-205ENST00000401607 NLRP5P59047 1200 aa29.49■■■□□ 2.31
CPNE1-205ENST00000401607 RILPL1Q5EBL4 403 aa29.49■■■□□ 2.31
CPNE1-205ENST00000401607 EARS2Q5JPH6 523 aaKnown RBP29.49■■■□□ 2.31
CPNE1-205ENST00000401607 WWC2Q6AWC2 1192 aa29.49■■■□□ 2.31
CPNE1-205ENST00000401607 TYW1BQ6NUM6 668 aa29.49■■■□□ 2.31
CPNE1-205ENST00000401607 SIAH1Q8IUQ4 282 aa29.49■■■□□ 2.31
CPNE1-205ENST00000401607 CDAN1Q8IWY9 1227 aa29.49■■■□□ 2.31
CPNE1-205ENST00000401607 CCAR1Q8IX12 1150 aaKnown RBP29.49■■■□□ 2.31
CPNE1-205ENST00000401607 MKL1Q969V6 931 aa29.49■■■□□ 2.31
CPNE1-205ENST00000401607 TMEM39BQ9GZU3 492 aa29.49■■■□□ 2.31
CPNE1-205ENST00000401607 GOLPH3LQ9H4A5 285 aa29.49■■■□□ 2.31
CPNE1-205ENST00000401607 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.49■■■□□ 2.319e-8■■■■■ 116.8
CPNE1-205ENST00000401607 BRMS1Q9HCU9 246 aa29.49■■■□□ 2.31
CPNE1-205ENST00000401607 PGAP2Q9UHJ9 254 aa29.49■■■□□ 2.31
CPNE1-205ENST00000401607 ZNF541Q9H0D2 1346 aa29.49■■■□□ 2.31
CPNE1-205ENST00000401607 FAM205CA6NFA0 338 aa29.49■■■□□ 2.31
CPNE1-205ENST00000401607 DPF2Q92785 391 aa29.49■■■□□ 2.31
CPNE1-205ENST00000401607 RIOX1Q9H6W3 641 aa29.49■■■□□ 2.31
CPNE1-205ENST00000401607 MRE11P49959 708 aa29.48■■■□□ 2.31
CPNE1-205ENST00000401607 ZNF543Q08ER8 600 aa29.48■■■□□ 2.31
CPNE1-205ENST00000401607 UBA5Q9GZZ9 404 aa29.48■■■□□ 2.31
CPNE1-205ENST00000401607 CABP5Q9NP86 173 aa29.48■■■□□ 2.31
CPNE1-205ENST00000401607 DDX19AQ9NUU7 478 aaKnown RBP29.48■■■□□ 2.31
CPNE1-205ENST00000401607 GJA3Q9Y6H8 435 aa29.48■■■□□ 2.31
CPNE1-205ENST00000401607 A0A1W2PQ27 194 aa29.47■■■□□ 2.31
CPNE1-205ENST00000401607 A0A1W2PQ64 194 aa29.47■■■□□ 2.31
CPNE1-205ENST00000401607 A0A1W2PQD8 194 aa29.47■■■□□ 2.31
CPNE1-205ENST00000401607 ADAMTS3O15072 1205 aa29.47■■■□□ 2.31
CPNE1-205ENST00000401607 LETM1O95202 739 aaPredicted RBP29.47■■■□□ 2.31
CPNE1-205ENST00000401607 MICALL2Q8IY33 904 aa29.47■■■□□ 2.31
CPNE1-205ENST00000401607 STXBP3O00186 592 aa29.47■■■□□ 2.31
CPNE1-205ENST00000401607 PPP6R2O75170 966 aa29.47■■■□□ 2.31
CPNE1-205ENST00000401607 ICA1Q05084 483 aa29.47■■■□□ 2.31
CPNE1-205ENST00000401607 AXDND1Q5T1B0 1012 aaPredicted RBP29.47■■■□□ 2.31
CPNE1-205ENST00000401607 RBM26Q5T8P6 1007 aaKnown RBP29.47■■■□□ 2.31
CPNE1-205ENST00000401607 BARHL2Q9NY43 387 aa29.47■■■□□ 2.31
CPNE1-205ENST00000401607 GH2P01242 217 aa29.46■■■□□ 2.31
CPNE1-205ENST00000401607 XRCC6P12956 609 aaKnown RBP eCLIP29.46■■■□□ 2.31
CPNE1-205ENST00000401607 NOM1Q5C9Z4 860 aaKnown RBP29.46■■■□□ 2.31
CPNE1-205ENST00000401607 HEATR3Q7Z4Q2 680 aa29.46■■■□□ 2.31
CPNE1-205ENST00000401607 RRP36Q96EU6 259 aaKnown RBP29.46■■■□□ 2.31
CPNE1-205ENST00000401607 NUP62CLQ9H1M0 184 aa29.46■■■□□ 2.31
CPNE1-205ENST00000401607 GPCPD1Q9NPB8 672 aa29.46■■■□□ 2.31
CPNE1-205ENST00000401607 CALML3P27482 149 aa29.45■■■□□ 2.31
CPNE1-205ENST00000401607 MARCKSP29966 332 aaPredicted RBP29.45■■■□□ 2.31
CPNE1-205ENST00000401607 FSIP1Q8NA03 581 aa29.45■■■□□ 2.31
CPNE1-205ENST00000401607 PIGSQ96S52 555 aa29.45■■■□□ 2.31
CPNE1-205ENST00000401607 PCDHB6Q9Y5E3 794 aa29.45■■■□□ 2.31
CPNE1-205ENST00000401607 HOMER1Q86YM7 354 aa29.44■■■□□ 2.3
CPNE1-205ENST00000401607 ENGASEQ8NFI3 743 aa29.44■■■□□ 2.3
CPNE1-205ENST00000401607 MRPS27Q92552 414 aaKnown RBP29.44■■■□□ 2.3
CPNE1-205ENST00000401607 CLSTN2Q9H4D0 955 aa29.44■■■□□ 2.3
CPNE1-205ENST00000401607 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.44■■■□□ 2.3
CPNE1-205ENST00000401607 CNOT7Q9UIV1 285 aaKnown RBP29.44■■■□□ 2.3
CPNE1-205ENST00000401607 TBC1D12O60347 775 aa29.44■■■□□ 2.3
CPNE1-205ENST00000401607 SNW1Q13573 536 aaKnown RBP29.44■■■□□ 2.3
CPNE1-205ENST00000401607 ARHGAP27Q6ZUM4 889 aa29.44■■■□□ 2.3
CPNE1-205ENST00000401607 SAMD7Q7Z3H4 446 aa29.44■■■□□ 2.3
CPNE1-205ENST00000401607 CCDC148Q8NFR7 591 aa29.44■■■□□ 2.3
CPNE1-205ENST00000401607 VAT1LQ9HCJ6 419 aa29.44■■■□□ 2.3
CPNE1-205ENST00000401607 PCDHA4Q9UN74 947 aa29.44■■■□□ 2.3
CPNE1-205ENST00000401607 DICER1Q9UPY3 1922 aaKnown RBP29.43■■■□□ 2.3
CPNE1-205ENST00000401607 GPATCH4Q5T3I0 446 aaKnown RBP29.43■■■□□ 2.3
CPNE1-205ENST00000401607 CCDC73Q6ZRK6 1079 aa29.43■■■□□ 2.3
CPNE1-205ENST00000401607 BLIDQ8IZY5 108 aa29.43■■■□□ 2.3
CPNE1-205ENST00000401607 FAM177A1Q8N128 213 aaPredicted RBP29.43■■■□□ 2.3
CPNE1-205ENST00000401607 TTBK2Q6IQ55 1244 aa29.42■■■□□ 2.3
CPNE1-205ENST00000401607 JMYQ8N9B5 988 aa29.42■■■□□ 2.3
CPNE1-205ENST00000401607 DAGLBQ8NCG7 672 aa29.42■■■□□ 2.3
CPNE1-205ENST00000401607 RBSNQ9H1K0 784 aa29.42■■■□□ 2.3
CPNE1-205ENST00000401607 SEC63Q9UGP8 760 aaKnown RBP29.42■■■□□ 2.3
CPNE1-205ENST00000401607 FAM160A1Q05DH4 1040 aa29.41■■■□□ 2.3
CPNE1-205ENST00000401607 CAMK4Q16566 473 aa29.41■■■□□ 2.3
CPNE1-205ENST00000401607 CCDC96Q2M329 555 aa29.41■■■□□ 2.3
CPNE1-205ENST00000401607 TSPY26PQ9H489 355 aa29.41■■■□□ 2.3
CPNE1-205ENST00000401607 SCAF8Q9UPN6 1271 aaKnown RBP29.41■■■□□ 2.3
CPNE1-205ENST00000401607 M0R2N6 131 aa29.41■■■□□ 2.3
CPNE1-205ENST00000401607 LMNB1P20700 586 aa29.41■■■□□ 2.3
CPNE1-205ENST00000401607 TNNI2P48788 182 aa29.41■■■□□ 2.3
CPNE1-205ENST00000401607 TBC1D10BQ4KMP7 808 aaPredicted RBP29.41■■■□□ 2.3
CPNE1-205ENST00000401607 SLFN13Q68D06 897 aa29.41■■■□□ 2.3
CPNE1-205ENST00000401607 KCTD1Q719H9 257 aa29.41■■■□□ 2.3
CPNE1-205ENST00000401607 DCAF4Q8WV16 495 aa29.41■■■□□ 2.3
CPNE1-205ENST00000401607 FUCA2Q9BTY2 467 aa29.41■■■□□ 2.3
CPNE1-205ENST00000401607 ATP2B1P20020 1258 aa29.4■■■□□ 2.3
CPNE1-205ENST00000401607 MAP3K10Q02779 954 aa29.4■■■□□ 2.3
CPNE1-205ENST00000401607 RASA3Q14644 834 aa29.4■■■□□ 2.3
CPNE1-205ENST00000401607 TNMDQ9H2S6 317 aa29.4■■■□□ 2.3
CPNE1-205ENST00000401607 ASTN2O75129 1339 aaPredicted RBP29.4■■■□□ 2.3
CPNE1-205ENST00000401607 A0A1B0GVL5 298 aa29.39■■■□□ 2.3
CPNE1-205ENST00000401607 WNT7AO00755 349 aa29.39■■■□□ 2.3
CPNE1-205ENST00000401607 GALNT17Q6IS24 598 aa29.39■■■□□ 2.3
CPNE1-205ENST00000401607 RBM43Q6ZSC3 357 aaKnown RBP29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms