RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 DDTLA6NHG4 134 aaPredicted RBP18.25■□□□□ 0.51
CHRFAM7A-203ENST00000401522 B4E1Z4 1266 aa18.25■□□□□ 0.51
CHRFAM7A-203ENST00000401522 PLCD1P51178 756 aa18.25■□□□□ 0.51
CHRFAM7A-203ENST00000401522 CCZ1BP86790 482 aa18.25■□□□□ 0.51
CHRFAM7A-203ENST00000401522 CCZ1P86791 482 aaPredicted RBP18.25■□□□□ 0.51
CHRFAM7A-203ENST00000401522 TRIM29Q14134 588 aa18.25■□□□□ 0.51
CHRFAM7A-203ENST00000401522 RASA3Q14644 834 aa18.25■□□□□ 0.51
CHRFAM7A-203ENST00000401522 FILIP1Q7Z7B0 1213 aa18.25■□□□□ 0.51
CHRFAM7A-203ENST00000401522 DCPSQ96C86 337 aaKnown RBP18.25■□□□□ 0.51
CHRFAM7A-203ENST00000401522 DEFB129Q9H1M3 183 aa18.25■□□□□ 0.51
CHRFAM7A-203ENST00000401522 NMRK2Q9NPI5 230 aa18.25■□□□□ 0.51
CHRFAM7A-203ENST00000401522 STK36Q9NRP7 1315 aa18.25■□□□□ 0.51
CHRFAM7A-203ENST00000401522 FAM237AA0A1B0GTK4 181 aa18.24■□□□□ 0.51
CHRFAM7A-203ENST00000401522 CYP2D6P10635 497 aa18.24■□□□□ 0.51
CHRFAM7A-203ENST00000401522 LIFRP42702 1097 aa18.24■□□□□ 0.51
CHRFAM7A-203ENST00000401522 GNL2Q13823 731 aaKnown RBP18.24■□□□□ 0.51
CHRFAM7A-203ENST00000401522 ARID5BQ14865 1188 aa18.24■□□□□ 0.51
CHRFAM7A-203ENST00000401522 EAPPQ56P03 285 aaPredicted RBP18.24■□□□□ 0.51
CHRFAM7A-203ENST00000401522 CEP135Q66GS9 1140 aa18.24■□□□□ 0.51
CHRFAM7A-203ENST00000401522 NFXL1Q6ZNB6 911 aa18.24■□□□□ 0.51
CHRFAM7A-203ENST00000401522 TMEM39BQ9GZU3 492 aa18.24■□□□□ 0.51
CHRFAM7A-203ENST00000401522 CNNM2Q9H8M5 875 aa18.24■□□□□ 0.51
CHRFAM7A-203ENST00000401522 LY9Q9HBG7 655 aa18.24■□□□□ 0.51
CHRFAM7A-203ENST00000401522 PI4KBQ9UBF8 816 aa18.24■□□□□ 0.51
CHRFAM7A-203ENST00000401522 GOLGA8AA7E2F4 631 aa18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 TMEM67Q5HYA8 995 aa18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 ZSCAN29Q8IWY8 852 aaPredicted RBP18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 CCDC150Q8NCX0 1101 aa18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 CCDC112Q8NEF3 446 aa18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 ZNF526Q8TF50 670 aaPredicted RBP18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 HPSEQ9Y251 543 aa18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 PPP2R3BQ9Y5P8 575 aa18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 NID2Q14112 1375 aa18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 ROBO3Q96MS0 1386 aa18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 SMIM22K7EJ46 135 aa18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 IKBKBO14920 756 aa18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 HLA-DOAP06340 250 aa18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 U2AF2P26368 475 aaKnown RBP eCLIP18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 CDC27P30260 824 aa18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 SYKP43405 635 aa18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 EVX2Q03828 476 aa18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 PTPAQ15257 358 aa18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 NTRK3Q16288 839 aa18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 NYAP1Q6ZVC0 841 aa18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 NBPF11Q86T75 865 aa18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 MICU3Q86XE3 530 aa18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 PDCL2Q8N4E4 241 aa18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 TEPSINQ96N21 525 aa18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 AIFM3Q96NN9 605 aa18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 EHD4Q9H223 541 aa18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 TAOK2Q9UL54 1235 aa18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 SCAF8Q9UPN6 1271 aaKnown RBP18.23■□□□□ 0.51
CHRFAM7A-203ENST00000401522 LAMB1P07942 1786 aa18.22■□□□□ 0.51
CHRFAM7A-203ENST00000401522 FGRP09769 529 aa18.22■□□□□ 0.51
CHRFAM7A-203ENST00000401522 CTDSPL2Q05D32 466 aa18.22■□□□□ 0.51
CHRFAM7A-203ENST00000401522 SLC4A8Q2Y0W8 1093 aa18.22■□□□□ 0.51
CHRFAM7A-203ENST00000401522 METTL16Q86W50 562 aaKnown RBP18.22■□□□□ 0.51
CHRFAM7A-203ENST00000401522 FOXP4Q8IVH2 680 aaPredicted RBP18.22■□□□□ 0.51
CHRFAM7A-203ENST00000401522 WASF1Q92558 559 aa18.22■□□□□ 0.51
CHRFAM7A-203ENST00000401522 KRT23Q9C075 422 aa18.22■□□□□ 0.51
CHRFAM7A-203ENST00000401522 TUBE1Q9UJT0 475 aa18.22■□□□□ 0.51
CHRFAM7A-203ENST00000401522 KIF2AO00139 706 aaPredicted RBP18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 PCP11498 1178 aaKnown RBP18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 MARCKSP29966 332 aaPredicted RBP18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 GABPAQ06546 454 aa18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 PTPN14Q15678 1187 aa18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 AKNAD1Q5T1N1 836 aa18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 SULF1Q8IWU6 871 aa18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 NKX2-3Q8TAU0 364 aa18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 STAG1Q8WVM7 1258 aa18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 PHKBQ93100 1093 aa18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 CSRNP1Q96S65 589 aa18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 MAP3K14Q99558 947 aa18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 SERPINB13Q9UIV8 391 aa18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 SLC12A7Q9Y666 1083 aa18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 POLR2AP24928 1970 aaKnown RBP18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 CUTAO60888 179 aa18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 SMC2O95347 1197 aa18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 SSRP1Q08945 709 aaKnown RBP18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 NCAPHQ15003 741 aa18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 RESP18Q5W5W9 173 aa18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 CCAR2Q8N163 923 aaKnown RBP18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 XPO4Q9C0E2 1151 aaKnown RBP18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 RNF41Q9H4P4 317 aaPredicted RBP18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 SENP2Q9HC62 589 aa18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 FAM217BQ9NTX9 383 aaPredicted RBP18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 IFNKQ9P0W0 207 aa18.21■□□□□ 0.51
CHRFAM7A-203ENST00000401522 BIN1O00499 593 aa18.2■□□□□ 0.5
CHRFAM7A-203ENST00000401522 FMNL1O95466 1100 aaPredicted RBP18.2■□□□□ 0.5
CHRFAM7A-203ENST00000401522 POTEIP0CG38 1075 aa18.2■□□□□ 0.5
CHRFAM7A-203ENST00000401522 POTEJP0CG39 1038 aa18.2■□□□□ 0.5
CHRFAM7A-203ENST00000401522 RXRAP19793 462 aa18.2■□□□□ 0.5
CHRFAM7A-203ENST00000401522 KCNJ6P48051 423 aa18.2■□□□□ 0.5
CHRFAM7A-203ENST00000401522 NCBP1Q09161 790 aaKnown RBP18.2■□□□□ 0.5
CHRFAM7A-203ENST00000401522 MFSD6Q6ZSS7 791 aa18.2■□□□□ 0.5
CHRFAM7A-203ENST00000401522 C16orf86Q6ZW13 317 aa18.2■□□□□ 0.5
CHRFAM7A-203ENST00000401522 SMAP1Q8IYB5 467 aaPredicted RBP18.2■□□□□ 0.5
CHRFAM7A-203ENST00000401522 MTA3Q9BTC8 594 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms