RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 MRFAP1L1Q96HT8 127 aa13.44□□□□□ -0.26
COL25A1-202ENST00000399127 EYA3Q99504 573 aa13.44□□□□□ -0.26
COL25A1-202ENST00000399127 MAD2L2Q9UI95 211 aa13.44□□□□□ -0.26
COL25A1-202ENST00000399127 SMC2O95347 1197 aa13.44□□□□□ -0.26
COL25A1-202ENST00000399127 SCNN1DP51172 638 aa13.44□□□□□ -0.26
COL25A1-202ENST00000399127 NCAPHQ15003 741 aa13.44□□□□□ -0.26
COL25A1-202ENST00000399127 TTC38Q5R3I4 469 aa13.44□□□□□ -0.26
COL25A1-202ENST00000399127 TYW1BQ6NUM6 668 aa13.44□□□□□ -0.26
COL25A1-202ENST00000399127 CERS5Q8N5B7 392 aa13.44□□□□□ -0.26
COL25A1-202ENST00000399127 TBC1D22AQ8WUA7 517 aa13.44□□□□□ -0.26
COL25A1-202ENST00000399127 VWA3AA6NCI4 1184 aa13.43□□□□□ -0.26
COL25A1-202ENST00000399127 ATP1A3P13637 1013 aa13.43□□□□□ -0.26
COL25A1-202ENST00000399127 BMP6P22004 513 aa13.43□□□□□ -0.26
COL25A1-202ENST00000399127 MAPK8IP2Q13387 824 aaPredicted RBP13.43□□□□□ -0.26
COL25A1-202ENST00000399127 IFNKQ9P0W0 207 aa13.43□□□□□ -0.26
COL25A1-202ENST00000399127 A0A087X0B3 334 aa13.43□□□□□ -0.26
COL25A1-202ENST00000399127 CYTH3O43739 400 aa13.43□□□□□ -0.26
COL25A1-202ENST00000399127 ZBTB7AO95365 584 aa13.43□□□□□ -0.26
COL25A1-202ENST00000399127 CDC25BP30305 580 aa13.43□□□□□ -0.26
COL25A1-202ENST00000399127 MCM7P33993 719 aa13.43□□□□□ -0.26
COL25A1-202ENST00000399127 IRX3P78415 501 aaPredicted RBP13.43□□□□□ -0.26
COL25A1-202ENST00000399127 MDM2Q00987 491 aaPredicted RBP13.43□□□□□ -0.26
COL25A1-202ENST00000399127 PTGDRQ13258 359 aa13.43□□□□□ -0.26
COL25A1-202ENST00000399127 GRM4Q14833 912 aa13.43□□□□□ -0.26
COL25A1-202ENST00000399127 POSTNQ15063 836 aa13.43□□□□□ -0.26
COL25A1-202ENST00000399127 HSP90AA4PQ58FG1 418 aa13.43□□□□□ -0.26
COL25A1-202ENST00000399127 STYK1Q6J9G0 422 aa13.43□□□□□ -0.26
COL25A1-202ENST00000399127 C16orf86Q6ZW13 317 aa13.43□□□□□ -0.26
COL25A1-202ENST00000399127 DHX58Q96C10 678 aa13.43□□□□□ -0.26
COL25A1-202ENST00000399127 BPIFA3Q9BQP9 254 aa13.43□□□□□ -0.26
COL25A1-202ENST00000399127 XPO4Q9C0E2 1151 aaKnown RBP13.43□□□□□ -0.26
COL25A1-202ENST00000399127 FAM205AQ6ZU69 1335 aa13.43□□□□□ -0.26
COL25A1-202ENST00000399127 SNED1Q8TER0 1413 aa13.42□□□□□ -0.26
COL25A1-202ENST00000399127 PLCG2P16885 1265 aa13.42□□□□□ -0.26
COL25A1-202ENST00000399127 CASP1P29466 404 aa13.42□□□□□ -0.26
COL25A1-202ENST00000399127 HEATR3Q7Z4Q2 680 aa13.42□□□□□ -0.26
COL25A1-202ENST00000399127 SYMPKQ92797 1274 aaKnown RBP13.42□□□□□ -0.26
COL25A1-202ENST00000399127 CNKSR1Q969H4 720 aa13.42□□□□□ -0.26
COL25A1-202ENST00000399127 KCNQ5Q9NR82 932 aa13.42□□□□□ -0.26
COL25A1-202ENST00000399127 TTF2Q9UNY4 1162 aaKnown RBP13.42□□□□□ -0.26
COL25A1-202ENST00000399127 LTBP1Q14766 1721 aa13.42□□□□□ -0.26
COL25A1-202ENST00000399127 DDX60LQ5H9U9 1706 aaKnown RBP13.42□□□□□ -0.26
COL25A1-202ENST00000399127 GAKO14976 1311 aa13.42□□□□□ -0.26
COL25A1-202ENST00000399127 COL11A2P13942 1736 aaPredicted RBP13.42□□□□□ -0.26
COL25A1-202ENST00000399127 AFMP43652 599 aa13.42□□□□□ -0.26
COL25A1-202ENST00000399127 SLF2Q8IX21 1173 aa13.42□□□□□ -0.26
COL25A1-202ENST00000399127 ZNF579Q8NAF0 562 aaKnown RBP13.42□□□□□ -0.26
COL25A1-202ENST00000399127 ANKS1AQ92625 1134 aa13.42□□□□□ -0.26
COL25A1-202ENST00000399127 CEP95Q96GE4 821 aa13.42□□□□□ -0.26
COL25A1-202ENST00000399127 SPTLC3Q9NUV7 552 aa13.42□□□□□ -0.26
COL25A1-202ENST00000399127 ACTN4O43707 911 aaKnown RBP13.41□□□□□ -0.26
COL25A1-202ENST00000399127 EIF6P56537 245 aaKnown RBP13.41□□□□□ -0.26
COL25A1-202ENST00000399127 WWC2Q6AWC2 1192 aa13.41□□□□□ -0.26
COL25A1-202ENST00000399127 USP17L2Q6R6M4 530 aa13.41□□□□□ -0.26
COL25A1-202ENST00000399127 HOMER1Q86YM7 354 aa13.41□□□□□ -0.26
COL25A1-202ENST00000399127 CLEC10AQ8IUN9 316 aa13.41□□□□□ -0.26
COL25A1-202ENST00000399127 FAM163AQ96GL9 167 aaPredicted RBP13.41□□□□□ -0.26
COL25A1-202ENST00000399127 COA1Q9GZY4 146 aa13.41□□□□□ -0.26
COL25A1-202ENST00000399127 HSD3B7Q9H2F3 369 aa13.41□□□□□ -0.26
COL25A1-202ENST00000399127 DBNDD1Q9H9R9 158 aa13.41□□□□□ -0.26
COL25A1-202ENST00000399127 ZNF287Q9HBT7 754 aa13.41□□□□□ -0.26
COL25A1-202ENST00000399127 ATF5Q9Y2D1 282 aaPredicted RBP13.41□□□□□ -0.26
COL25A1-202ENST00000399127 MYH1P12882 1939 aa13.41□□□□□ -0.26
COL25A1-202ENST00000399127 LRRC37AA6NMS7 1700 aa13.41□□□□□ -0.26
COL25A1-202ENST00000399127 KLRF2D3W0D1 207 aa13.41□□□□□ -0.26
COL25A1-202ENST00000399127 SLURP2P0DP57 97 aa13.41□□□□□ -0.26
COL25A1-202ENST00000399127 PTPN21Q16825 1174 aa13.41□□□□□ -0.26
COL25A1-202ENST00000399127 BLIDQ8IZY5 108 aa13.41□□□□□ -0.26
COL25A1-202ENST00000399127 STAMQ92783 540 aa13.41□□□□□ -0.26
COL25A1-202ENST00000399127 VAT1LQ9HCJ6 419 aa13.41□□□□□ -0.26
COL25A1-202ENST00000399127 DDX4Q9NQI0 724 aaKnown RBP13.41□□□□□ -0.26
COL25A1-202ENST00000399127 TCP11L1Q9NUJ3 509 aa13.41□□□□□ -0.26
COL25A1-202ENST00000399127 MAN1B1Q9UKM7 699 aa13.41□□□□□ -0.26
COL25A1-202ENST00000399127 SMTNL1A8MU46 457 aa13.4□□□□□ -0.26
COL25A1-202ENST00000399127 IGSF3O75054 1194 aa13.4□□□□□ -0.26
COL25A1-202ENST00000399127 TPM4P67936 248 aa13.4□□□□□ -0.26
COL25A1-202ENST00000399127 CERS3Q8IU89 383 aa13.4□□□□□ -0.26
COL25A1-202ENST00000399127 LRRC8AQ8IWT6 810 aa13.4□□□□□ -0.26
COL25A1-202ENST00000399127 HOOK1Q9UJC3 728 aaKnown RBP13.4□□□□□ -0.26
COL25A1-202ENST00000399127 UTRNP46939 3433 aa13.4□□□□□ -0.26
COL25A1-202ENST00000399127 C21orf2O43822 256 aa13.4□□□□□ -0.26
COL25A1-202ENST00000399127 MYL5Q02045 173 aa13.4□□□□□ -0.26
COL25A1-202ENST00000399127 NEDD1Q8NHV4 660 aa13.4□□□□□ -0.26
COL25A1-202ENST00000399127 SMARCE1Q969G3 411 aa13.4□□□□□ -0.26
COL25A1-202ENST00000399127 PALM3A6NDB9 673 aaPredicted RBP13.39□□□□□ -0.27
COL25A1-202ENST00000399127 CDC25AP30304 524 aa13.39□□□□□ -0.27
COL25A1-202ENST00000399127 ATP2C1P98194 919 aaPredicted RBP13.39□□□□□ -0.27
COL25A1-202ENST00000399127 CCDC178Q5BJE1 867 aa13.39□□□□□ -0.27
COL25A1-202ENST00000399127 TMC6Q7Z403 805 aa13.39□□□□□ -0.27
COL25A1-202ENST00000399127 CCDC125Q86Z20 511 aa13.39□□□□□ -0.27
COL25A1-202ENST00000399127 TRMT44Q8IYL2 757 aaKnown RBP13.39□□□□□ -0.27
COL25A1-202ENST00000399127 FANCLQ9NW38 375 aa13.39□□□□□ -0.27
COL25A1-202ENST00000399127 PPP1R1BQ9UD71 204 aaPredicted RBP13.39□□□□□ -0.27
COL25A1-202ENST00000399127 PCDHA4Q9UN74 947 aa13.39□□□□□ -0.27
COL25A1-202ENST00000399127 ADAMTSL1Q8N6G6 1762 aa13.39□□□□□ -0.27
COL25A1-202ENST00000399127 IKBKBO14920 756 aa13.39□□□□□ -0.27
COL25A1-202ENST00000399127 CALML3P27482 149 aa13.39□□□□□ -0.27
COL25A1-202ENST00000399127 GNAQP50148 359 aa13.39□□□□□ -0.27
COL25A1-202ENST00000399127 IRX5P78411 483 aaPredicted RBP13.39□□□□□ -0.27
COL25A1-202ENST00000399127 FANCCQ00597 558 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms