RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 E2F4Q16254 413 aa22.1■■□□□ 1.13
COL13A1-205ENST00000398978 AEBP2Q6ZN18 517 aaPredicted RBP22.1■■□□□ 1.13
COL13A1-205ENST00000398978 RASGRP2Q7LDG7 609 aa22.1■■□□□ 1.13
COL13A1-205ENST00000398978 STAG2Q8N3U4 1231 aa22.1■■□□□ 1.13
COL13A1-205ENST00000398978 RASSF8Q8NHQ8 419 aa22.1■■□□□ 1.13
COL13A1-205ENST00000398978 CHP1Q99653 195 aa22.1■■□□□ 1.13
COL13A1-205ENST00000398978 ZNF804BA4D1E1 1349 aa22.09■■□□□ 1.13
COL13A1-205ENST00000398978 DDB1Q16531 1140 aa22.09■■□□□ 1.13
COL13A1-205ENST00000398978 CPVLQ9H3G5 476 aa22.09■■□□□ 1.13
COL13A1-205ENST00000398978 ARFGAP3Q9NP61 516 aa22.09■■□□□ 1.13
COL13A1-205ENST00000398978 DCP1AQ9NPI6 582 aaPredicted RBP22.09■■□□□ 1.13
COL13A1-205ENST00000398978 SCG2P13521 617 aa22.09■■□□□ 1.13
COL13A1-205ENST00000398978 SMC1AQ14683 1233 aaKnown RBP22.09■■□□□ 1.13
COL13A1-205ENST00000398978 PDXDC2PQ6P474 469 aa22.09■■□□□ 1.13
COL13A1-205ENST00000398978 IQUBQ8NA54 791 aa22.09■■□□□ 1.13
COL13A1-205ENST00000398978 DYNLL2Q96FJ2 89 aa22.09■■□□□ 1.13
COL13A1-205ENST00000398978 TXNRD3Q86VQ6 643 aa22.08■■□□□ 1.13
COL13A1-205ENST00000398978 MARCH10Q8NA82 808 aaPredicted RBP22.08■■□□□ 1.13
COL13A1-205ENST00000398978 NSUN4Q96CB9 384 aaKnown RBP22.08■■□□□ 1.13
COL13A1-205ENST00000398978 PNKPQ96T60 521 aa22.08■■□□□ 1.13
COL13A1-205ENST00000398978 RBM28Q9NW13 759 aaKnown RBP22.08■■□□□ 1.13
COL13A1-205ENST00000398978 NHSL1Q5SYE7 1610 aa22.08■■□□□ 1.13
COL13A1-205ENST00000398978 MCM6Q14566 821 aa22.08■■□□□ 1.13
COL13A1-205ENST00000398978 BCL9LQ86UU0 1499 aa22.08■■□□□ 1.12
COL13A1-205ENST00000398978 PRCPP42785 496 aa22.08■■□□□ 1.12
COL13A1-205ENST00000398978 COPB1P53618 953 aaKnown RBP22.08■■□□□ 1.12
COL13A1-205ENST00000398978 RCAN1P53805 252 aa22.08■■□□□ 1.12
COL13A1-205ENST00000398978 PMS1P54277 932 aaKnown RBP22.08■■□□□ 1.12
COL13A1-205ENST00000398978 TYW1BQ6NUM6 668 aa22.08■■□□□ 1.12
COL13A1-205ENST00000398978 GPIHBP1Q8IV16 184 aa22.08■■□□□ 1.12
COL13A1-205ENST00000398978 LONRF2Q1L5Z9 754 aa22.07■■□□□ 1.12
COL13A1-205ENST00000398978 MTA3Q9BTC8 594 aa22.07■■□□□ 1.12
COL13A1-205ENST00000398978 BRIP1Q9BX63 1249 aa22.07■■□□□ 1.12
COL13A1-205ENST00000398978 DUOX1Q9NRD9 1551 aa22.07■■□□□ 1.12
COL13A1-205ENST00000398978 KCNJ18B7U540 433 aa22.07■■□□□ 1.12
COL13A1-205ENST00000398978 TXLNAP40222 546 aa22.07■■□□□ 1.12
COL13A1-205ENST00000398978 UBXN1Q04323 297 aa22.07■■□□□ 1.12
COL13A1-205ENST00000398978 PAK1Q13153 545 aa22.07■■□□□ 1.12
COL13A1-205ENST00000398978 KCNJ12Q14500 433 aa22.07■■□□□ 1.12
COL13A1-205ENST00000398978 RABGGTAQ92696 567 aa22.07■■□□□ 1.12
COL13A1-205ENST00000398978 MCM9Q9NXL9 1143 aa22.07■■□□□ 1.12
COL13A1-205ENST00000398978 KRT9P35527 623 aa22.06■■□□□ 1.12
COL13A1-205ENST00000398978 FUT8Q9BYC5 575 aa22.06■■□□□ 1.12
COL13A1-205ENST00000398978 ANKZF1Q9H8Y5 726 aa22.06■■□□□ 1.12
COL13A1-205ENST00000398978 ABHD10Q9NUJ1 306 aa22.06■■□□□ 1.12
COL13A1-205ENST00000398978 CACNA1SQ13698 1873 aa22.06■■□□□ 1.12
COL13A1-205ENST00000398978 TPM1P09493 284 aa22.06■■□□□ 1.12
COL13A1-205ENST00000398978 CTAGE1Q96RT6 745 aa22.06■■□□□ 1.12
COL13A1-205ENST00000398978 RPN1P04843 607 aaKnown RBP22.05■■□□□ 1.12
COL13A1-205ENST00000398978 SRGAP1Q7Z6B7 1085 aa22.05■■□□□ 1.12
COL13A1-205ENST00000398978 DOT1LQ8TEK3 1739 aa22.05■■□□□ 1.12
COL13A1-205ENST00000398978 H3BQF6 201 aa22.05■■□□□ 1.12
COL13A1-205ENST00000398978 ENC1O14682 589 aa22.05■■□□□ 1.12
COL13A1-205ENST00000398978 CYP2C19P33261 490 aa22.05■■□□□ 1.12
COL13A1-205ENST00000398978 UBE4AQ14139 1066 aa22.05■■□□□ 1.12
COL13A1-205ENST00000398978 NCAPH2Q6IBW4 605 aa22.05■■□□□ 1.12
COL13A1-205ENST00000398978 TMEM60Q9H2L4 133 aa22.05■■□□□ 1.12
COL13A1-205ENST00000398978 GUCA1BQ9UMX6 200 aa22.05■■□□□ 1.12
COL13A1-205ENST00000398978 PLCH1Q4KWH8 1693 aa22.05■■□□□ 1.12
COL13A1-205ENST00000398978 USP17L3A6NCW0 530 aa22.05■■□□□ 1.12
COL13A1-205ENST00000398978 USP17L4A6NCW7 530 aa22.05■■□□□ 1.12
COL13A1-205ENST00000398978 STAT6P42226 847 aa22.05■■□□□ 1.12
COL13A1-205ENST00000398978 TCP11X2Q5H9J9 407 aa22.05■■□□□ 1.12
COL13A1-205ENST00000398978 USP17L1Q7RTZ2 530 aa22.05■■□□□ 1.12
COL13A1-205ENST00000398978 CNGA4Q8IV77 575 aa22.05■■□□□ 1.12
COL13A1-205ENST00000398978 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.05■■□□□ 1.12
COL13A1-205ENST00000398978 CDC23Q9UJX2 597 aa22.05■■□□□ 1.12
COL13A1-205ENST00000398978 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.05■■□□□ 1.12
COL13A1-205ENST00000398978 GOLGA8HP0CJ92 632 aa22.04■■□□□ 1.12
COL13A1-205ENST00000398978 PPP2R5BQ15173 497 aa22.04■■□□□ 1.12
COL13A1-205ENST00000398978 SLC44A5Q8NCS7 719 aa22.04■■□□□ 1.12
COL13A1-205ENST00000398978 DDAH1O94760 285 aa22.04■■□□□ 1.12
COL13A1-205ENST00000398978 TFAP4Q01664 338 aa22.04■■□□□ 1.12
COL13A1-205ENST00000398978 RCSD1Q6JBY9 416 aa22.04■■□□□ 1.12
COL13A1-205ENST00000398978 BSDC1Q9NW68 430 aaPredicted RBP22.04■■□□□ 1.12
COL13A1-205ENST00000398978 CTAGE9A4FU28 777 aa22.03■■□□□ 1.12
COL13A1-205ENST00000398978 GTPBP6O43824 516 aaPredicted RBP22.03■■□□□ 1.12
COL13A1-205ENST00000398978 CALM1P0DP23 149 aa22.03■■□□□ 1.12
COL13A1-205ENST00000398978 CALM2P0DP24 149 aa22.03■■□□□ 1.12
COL13A1-205ENST00000398978 CALM3P0DP25 149 aa22.03■■□□□ 1.12
COL13A1-205ENST00000398978 PFKFB3Q16875 520 aaPredicted RBP22.03■■□□□ 1.12
COL13A1-205ENST00000398978 INF2Q27J81 1249 aa22.03■■□□□ 1.12
COL13A1-205ENST00000398978 HDAC6Q9UBN7 1215 aa22.03■■□□□ 1.12
COL13A1-205ENST00000398978 TBC1D9BQ66K14 1250 aa22.03■■□□□ 1.12
COL13A1-205ENST00000398978 SRP68Q9UHB9 627 aaKnown RBP22.03■■□□□ 1.12
COL13A1-205ENST00000398978 HNRNPH2P55795 449 aaKnown RBP22.03■■□□□ 1.12
COL13A1-205ENST00000398978 N4BP1O75113 896 aaKnown RBP22.02■■□□□ 1.12
COL13A1-205ENST00000398978 BMP15O95972 392 aa22.02■■□□□ 1.12
COL13A1-205ENST00000398978 ARHGAP25P42331 645 aa22.02■■□□□ 1.12
COL13A1-205ENST00000398978 PTF1AQ7RTS3 328 aa22.02■■□□□ 1.12
COL13A1-205ENST00000398978 IRF2BP1Q8IU81 584 aa22.02■■□□□ 1.12
COL13A1-205ENST00000398978 BLIDQ8IZY5 108 aa22.02■■□□□ 1.12
COL13A1-205ENST00000398978 NOA1Q8NC60 698 aaKnown RBP22.02■■□□□ 1.12
COL13A1-205ENST00000398978 LRRC15Q8TF66 581 aa22.02■■□□□ 1.12
COL13A1-205ENST00000398978 GPR101Q96P66 508 aaPredicted RBP22.02■■□□□ 1.12
COL13A1-205ENST00000398978 NAA15Q9BXJ9 866 aaKnown RBP22.02■■□□□ 1.12
COL13A1-205ENST00000398978 CRNKL1Q9BZJ0 848 aaKnown RBP22.02■■□□□ 1.12
COL13A1-205ENST00000398978 IL17RBQ9NRM6 502 aa22.02■■□□□ 1.12
COL13A1-205ENST00000398978 RWDD2AQ9UIY3 292 aa22.02■■□□□ 1.12
COL13A1-205ENST00000398978 KLK7P49862 253 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms