RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 FLOT1O75955 427 aa16■□□□□ 0.15
VCX3A-202ENST00000398729 COL6A1P12109 1028 aa16■□□□□ 0.15
VCX3A-202ENST00000398729 ZKSCAN1P17029 563 aaPredicted RBP16■□□□□ 0.15
VCX3A-202ENST00000398729 RASA1P20936 1047 aa16■□□□□ 0.15
VCX3A-202ENST00000398729 LHX8Q68G74 356 aa16■□□□□ 0.15
VCX3A-202ENST00000398729 USP6NLQ92738 828 aa16■□□□□ 0.15
VCX3A-202ENST00000398729 NAPBQ9H115 298 aa16■□□□□ 0.15
VCX3A-202ENST00000398729 GOPCQ9HD26 462 aa16■□□□□ 0.15
VCX3A-202ENST00000398729 SPTBN5Q9NRC6 3674 aaKnown RBP15.99■□□□□ 0.15
VCX3A-202ENST00000398729 PRKAR2AP13861 404 aaKnown RBP15.99■□□□□ 0.15
VCX3A-202ENST00000398729 DSG3P32926 999 aa15.99■□□□□ 0.15
VCX3A-202ENST00000398729 CACNB2Q08289 660 aaPredicted RBP15.99■□□□□ 0.15
VCX3A-202ENST00000398729 SMC5Q8IY18 1101 aa15.99■□□□□ 0.15
VCX3A-202ENST00000398729 ZNF444Q8N0Y2 327 aaPredicted RBP15.99■□□□□ 0.15
VCX3A-202ENST00000398729 MB21D1Q8N884 522 aa15.99■□□□□ 0.15
VCX3A-202ENST00000398729 APBA2Q99767 749 aa15.99■□□□□ 0.15
VCX3A-202ENST00000398729 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.99■□□□□ 0.15
VCX3A-202ENST00000398729 LNPKQ9C0E8 428 aa15.99■□□□□ 0.15
VCX3A-202ENST00000398729 RLFQ13129 1914 aa15.98■□□□□ 0.15
VCX3A-202ENST00000398729 GREB1LQ9C091 1923 aaPredicted RBP15.98■□□□□ 0.15
VCX3A-202ENST00000398729 SLC15A5A6NIM6 579 aa15.98■□□□□ 0.15
VCX3A-202ENST00000398729 RAD21O60216 631 aa15.98■□□□□ 0.15
VCX3A-202ENST00000398729 SLC3A2P08195 630 aaKnown RBP15.98■□□□□ 0.15
VCX3A-202ENST00000398729 PTPREP23469 700 aa15.98■□□□□ 0.15
VCX3A-202ENST00000398729 MAP2K5Q13163 448 aa15.98■□□□□ 0.15
VCX3A-202ENST00000398729 EXOC6Q8TAG9 804 aa15.98■□□□□ 0.15
VCX3A-202ENST00000398729 UBE2OQ9C0C9 1292 aaKnown RBP15.98■□□□□ 0.15
VCX3A-202ENST00000398729 SPATC1LQ9H0A9 340 aa15.98■□□□□ 0.15
VCX3A-202ENST00000398729 NYAP2Q9P242 653 aa15.98■□□□□ 0.15
VCX3A-202ENST00000398729 EYSQ5T1H1 3165 aa15.97■□□□□ 0.15
VCX3A-202ENST00000398729 A0A0G2JMZ2 1700 aa15.97■□□□□ 0.15
VCX3A-202ENST00000398729 POTEB2H3BUK9 544 aa15.97■□□□□ 0.15
VCX3A-202ENST00000398729 PDE4BQ07343 736 aa15.97■□□□□ 0.15
VCX3A-202ENST00000398729 PLS1Q14651 629 aa15.97■□□□□ 0.15
VCX3A-202ENST00000398729 CCL14Q16627 93 aa15.97■□□□□ 0.15
VCX3A-202ENST00000398729 LRRC26Q2I0M4 334 aa15.97■□□□□ 0.15
VCX3A-202ENST00000398729 B4GALNT3Q6L9W6 998 aa15.97■□□□□ 0.15
VCX3A-202ENST00000398729 SAMD1Q6SPF0 538 aaPredicted RBP15.97■□□□□ 0.15
VCX3A-202ENST00000398729 SHCBP1Q8NEM2 672 aa15.97■□□□□ 0.15
VCX3A-202ENST00000398729 ATG4CQ96DT6 458 aa15.97■□□□□ 0.15
VCX3A-202ENST00000398729 MOV10L1Q9BXT6 1211 aaKnown RBP15.97■□□□□ 0.15
VCX3A-202ENST00000398729 PRUNE2Q8WUY3 3088 aa15.97■□□□□ 0.15
VCX3A-202ENST00000398729 PARP14Q460N5 1801 aa15.96■□□□□ 0.15
VCX3A-202ENST00000398729 STRNO43815 780 aa15.96■□□□□ 0.15
VCX3A-202ENST00000398729 PRDM1O75626 825 aa15.96■□□□□ 0.15
VCX3A-202ENST00000398729 CCND3P30281 292 aaPredicted RBP15.96■□□□□ 0.15
VCX3A-202ENST00000398729 PPARAQ07869 468 aa15.96■□□□□ 0.15
VCX3A-202ENST00000398729 GRB14Q14449 540 aa15.96■□□□□ 0.15
VCX3A-202ENST00000398729 CCDC129Q6ZRS4 1044 aa15.96■□□□□ 0.15
VCX3A-202ENST00000398729 TICAM2Q86XR7 235 aa15.96■□□□□ 0.15
VCX3A-202ENST00000398729 HELLSQ9NRZ9 838 aa15.96■□□□□ 0.15
VCX3A-202ENST00000398729 SUPT16HQ9Y5B9 1047 aaKnown RBP15.96■□□□□ 0.15
VCX3A-202ENST00000398729 IGKV6D-41A0A0C4DH26 115 aa15.95■□□□□ 0.14
VCX3A-202ENST00000398729 TRIM6-TRIM34B2RNG4 842 aa15.95■□□□□ 0.14
VCX3A-202ENST00000398729 IGHDP01880 384 aa15.95■□□□□ 0.14
VCX3A-202ENST00000398729 TSPY3P0CV98 308 aa15.95■□□□□ 0.14
VCX3A-202ENST00000398729 TSPY8P0CW00 308 aa15.95■□□□□ 0.14
VCX3A-202ENST00000398729 ERCC3P19447 782 aa15.95■□□□□ 0.14
VCX3A-202ENST00000398729 FAM83BQ5T0W9 1011 aa15.95■□□□□ 0.14
VCX3A-202ENST00000398729 MFSD14CQ5VZR4 134 aa15.95■□□□□ 0.14
VCX3A-202ENST00000398729 CHD1LQ86WJ1 897 aa15.95■□□□□ 0.14
VCX3A-202ENST00000398729 COL25A1Q9BXS0 654 aaPredicted RBP15.95■□□□□ 0.14
VCX3A-202ENST00000398729 MROH8Q9H579 483 aa15.95■□□□□ 0.14
VCX3A-202ENST00000398729 MYH4Q9Y623 1939 aa15.94■□□□□ 0.14
VCX3A-202ENST00000398729 F5H6K3 240 aa15.94■□□□□ 0.14
VCX3A-202ENST00000398729 HOXC6P09630 235 aa15.94■□□□□ 0.14
VCX3A-202ENST00000398729 MDM2Q00987 491 aaPredicted RBP15.94■□□□□ 0.14
VCX3A-202ENST00000398729 NUCB1Q02818 461 aa15.94■□□□□ 0.14
VCX3A-202ENST00000398729 KLRC3Q07444 240 aa15.94■□□□□ 0.14
VCX3A-202ENST00000398729 DPP9Q86TI2 863 aa15.94■□□□□ 0.14
VCX3A-202ENST00000398729 NCAPG2Q86XI2 1143 aa15.94■□□□□ 0.14
VCX3A-202ENST00000398729 CEP95Q96GE4 821 aa15.94■□□□□ 0.14
VCX3A-202ENST00000398729 FBXO28Q9NVF7 368 aa15.94■□□□□ 0.14
VCX3A-202ENST00000398729 MTMR4Q9NYA4 1195 aa15.94■□□□□ 0.14
VCX3A-202ENST00000398729 CLIP2Q9UDT6 1046 aa15.94■□□□□ 0.14
VCX3A-202ENST00000398729 PPP1R9AQ9ULJ8 1098 aa15.94■□□□□ 0.14
VCX3A-202ENST00000398729 ADAMTS5Q9UNA0 930 aa15.94■□□□□ 0.14
VCX3A-202ENST00000398729 TTC28Q96AY4 2481 aa15.94■□□□□ 0.14
VCX3A-202ENST00000398729 FOXP2O15409 715 aa15.93■□□□□ 0.14
VCX3A-202ENST00000398729 SLC25A27O95847 323 aa15.93■□□□□ 0.14
VCX3A-202ENST00000398729 TTLL1O95922 423 aa15.93■□□□□ 0.14
VCX3A-202ENST00000398729 ADORA2AP29274 412 aa15.93■□□□□ 0.14
VCX3A-202ENST00000398729 TMEM132BQ14DG7 1078 aa15.93■□□□□ 0.14
VCX3A-202ENST00000398729 MCMDC2Q4G0Z9 681 aa15.93■□□□□ 0.14
VCX3A-202ENST00000398729 NEDD1Q8NHV4 660 aa15.93■□□□□ 0.14
VCX3A-202ENST00000398729 NPLOC4Q8TAT6 608 aa15.93■□□□□ 0.14
VCX3A-202ENST00000398729 MKL1Q969V6 931 aa15.93■□□□□ 0.14
VCX3A-202ENST00000398729 RILPL2Q969X0 211 aa15.93■□□□□ 0.14
VCX3A-202ENST00000398729 GUCD1Q96NT3 240 aa15.93■□□□□ 0.14
VCX3A-202ENST00000398729 SLC5A4Q9NY91 659 aa15.93■□□□□ 0.14
VCX3A-202ENST00000398729 SYNPO2Q9UMS6 1093 aa15.93■□□□□ 0.14
VCX3A-202ENST00000398729 COL11A1P12107 1806 aaPredicted RBP15.93■□□□□ 0.14
VCX3A-202ENST00000398729 ZNF236Q9UL36 1845 aa15.93■□□□□ 0.14
VCX3A-202ENST00000398729 PLIN4Q96Q06 1357 aa15.92■□□□□ 0.14
VCX3A-202ENST00000398729 VWA5AO00534 786 aa15.92■□□□□ 0.14
VCX3A-202ENST00000398729 NDUFB10O96000 172 aa15.92■□□□□ 0.14
VCX3A-202ENST00000398729 TFAP4Q01664 338 aa15.92■□□□□ 0.14
VCX3A-202ENST00000398729 VPS53Q5VIR6 699 aa15.92■□□□□ 0.14
VCX3A-202ENST00000398729 FAM109BQ6ICB4 259 aaPredicted RBP15.92■□□□□ 0.14
VCX3A-202ENST00000398729 PLEKHM2Q8IWE5 1019 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms