RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 MRPL44Q9H9J2 332 aaKnown RBP11.46□□□□□ -0.58
HMGCLL1-205ENST00000398661 GPHNQ9NQX3 736 aaPredicted RBP11.46□□□□□ -0.58
HMGCLL1-205ENST00000398661 ZNF277Q9NRM2 450 aaPredicted RBP11.46□□□□□ -0.58
HMGCLL1-205ENST00000398661 INTS13Q9NVM9 706 aa11.46□□□□□ -0.58
HMGCLL1-205ENST00000398661 AATFQ9NY61 560 aaKnown RBP eCLIP11.46□□□□□ -0.58
HMGCLL1-205ENST00000398661 IRS2Q9Y4H2 1338 aa11.45□□□□□ -0.58
HMGCLL1-205ENST00000398661 MYO1BO43795 1136 aa11.45□□□□□ -0.58
HMGCLL1-205ENST00000398661 SCNN1DP51172 638 aa11.45□□□□□ -0.58
HMGCLL1-205ENST00000398661 MECOMQ03112 1051 aa11.45□□□□□ -0.58
HMGCLL1-205ENST00000398661 TUBB2AQ13885 445 aa11.45□□□□□ -0.58
HMGCLL1-205ENST00000398661 RAB11FIP4Q86YS3 637 aa11.45□□□□□ -0.58
HMGCLL1-205ENST00000398661 CLIC6Q96NY7 704 aa11.45□□□□□ -0.58
HMGCLL1-205ENST00000398661 CRAMP1Q96RY5 1269 aa11.45□□□□□ -0.58
HMGCLL1-205ENST00000398661 TUBB2BQ9BVA1 445 aa11.45□□□□□ -0.58
HMGCLL1-205ENST00000398661 CD209Q9NNX6 404 aa11.45□□□□□ -0.58
HMGCLL1-205ENST00000398661 CLIC4Q9Y696 253 aa11.45□□□□□ -0.58
HMGCLL1-205ENST00000398661 TCRBV5S4A2TA0A5A2 114 aa11.45□□□□□ -0.58
HMGCLL1-205ENST00000398661 PRPF6O94906 941 aaKnown RBP11.45□□□□□ -0.58
HMGCLL1-205ENST00000398661 SYF2O95926 243 aaKnown RBP11.45□□□□□ -0.58
HMGCLL1-205ENST00000398661 UQCRFS1P1P0C7P4 283 aa11.45□□□□□ -0.58
HMGCLL1-205ENST00000398661 ADKP55263 362 aaKnown RBP11.45□□□□□ -0.58
HMGCLL1-205ENST00000398661 FBXW10Q5XX13 1052 aa11.45□□□□□ -0.58
HMGCLL1-205ENST00000398661 STOX1Q6ZVD7 989 aa11.45□□□□□ -0.58
HMGCLL1-205ENST00000398661 KCNG4Q8TDN1 519 aa11.45□□□□□ -0.58
HMGCLL1-205ENST00000398661 CHD4Q14839 1912 aa11.44□□□□□ -0.58
HMGCLL1-205ENST00000398661 FGAP02671 866 aa11.44□□□□□ -0.58
HMGCLL1-205ENST00000398661 TUBBP07437 444 aa11.44□□□□□ -0.58
HMGCLL1-205ENST00000398661 AARSP49588 968 aaKnown RBP eCLIP11.44□□□□□ -0.58
HMGCLL1-205ENST00000398661 VIPAS39Q9H9C1 493 aa11.44□□□□□ -0.58
HMGCLL1-205ENST00000398661 FANCLQ9NW38 375 aa11.44□□□□□ -0.58
HMGCLL1-205ENST00000398661 FAM169AQ9Y6X4 670 aa11.44□□□□□ -0.58
HMGCLL1-205ENST00000398661 CCDC175P0C221 793 aa11.44□□□□□ -0.58
HMGCLL1-205ENST00000398661 CTCFLQ8NI51 663 aaPredicted RBP11.44□□□□□ -0.58
HMGCLL1-205ENST00000398661 AIDAQ96BJ3 306 aa11.44□□□□□ -0.58
HMGCLL1-205ENST00000398661 ZC3H12CQ9C0D7 883 aaKnown RBP11.44□□□□□ -0.58
HMGCLL1-205ENST00000398661 LZTFL1Q9NQ48 299 aa11.44□□□□□ -0.58
HMGCLL1-205ENST00000398661 TUBE1Q9UJT0 475 aa11.44□□□□□ -0.58
HMGCLL1-205ENST00000398661 SPTLC2O15270 562 aa11.43□□□□□ -0.58
HMGCLL1-205ENST00000398661 YEATS4O95619 227 aa11.43□□□□□ -0.58
HMGCLL1-205ENST00000398661 PFKFB1P16118 471 aa11.43□□□□□ -0.58
HMGCLL1-205ENST00000398661 ALDH1B1P30837 517 aa11.43□□□□□ -0.58
HMGCLL1-205ENST00000398661 CCT5P48643 541 aa11.43□□□□□ -0.58
HMGCLL1-205ENST00000398661 MAP3K12Q12852 859 aa11.43□□□□□ -0.58
HMGCLL1-205ENST00000398661 MFSD14BQ5SR56 506 aa11.43□□□□□ -0.58
HMGCLL1-205ENST00000398661 SP8Q8IXZ3 490 aa11.43□□□□□ -0.58
HMGCLL1-205ENST00000398661 APPBP2Q92624 585 aa11.43□□□□□ -0.58
HMGCLL1-205ENST00000398661 FAM212AQ96EL1 285 aa11.43□□□□□ -0.58
HMGCLL1-205ENST00000398661 GNL3LQ9NVN8 582 aaKnown RBP11.43□□□□□ -0.58
HMGCLL1-205ENST00000398661 BCS1LQ9Y276 419 aa11.43□□□□□ -0.58
HMGCLL1-205ENST00000398661 G3V3G9 751 aa11.43□□□□□ -0.58
HMGCLL1-205ENST00000398661 EBAG9O00559 213 aa11.43□□□□□ -0.58
HMGCLL1-205ENST00000398661 KIF5CO60282 957 aa11.43□□□□□ -0.58
HMGCLL1-205ENST00000398661 SHOX2O60902 331 aaPredicted RBP11.43□□□□□ -0.58
HMGCLL1-205ENST00000398661 CTDSPL2Q05D32 466 aa11.43□□□□□ -0.58
HMGCLL1-205ENST00000398661 MTF1Q14872 753 aa11.43□□□□□ -0.58
HMGCLL1-205ENST00000398661 KIF4BQ2VIQ3 1234 aa11.43□□□□□ -0.58
HMGCLL1-205ENST00000398661 DCAF8Q5TAQ9 597 aa11.43□□□□□ -0.58
HMGCLL1-205ENST00000398661 POTEDQ86YR6 584 aa11.43□□□□□ -0.58
HMGCLL1-205ENST00000398661 CNPY4Q8N129 248 aa11.43□□□□□ -0.58
HMGCLL1-205ENST00000398661 CERS5Q8N5B7 392 aa11.43□□□□□ -0.58
HMGCLL1-205ENST00000398661 EPB41L4AQ9HCS5 686 aaPredicted RBP11.43□□□□□ -0.58
HMGCLL1-205ENST00000398661 SALL1Q9NSC2 1324 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 CCDC189A1A4V9 331 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 CTAGE15A4D2H0 777 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 CTAGE8P0CG41 777 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 PTGER2P43116 358 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 CCT2P78371 535 aaKnown RBP11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 SETQ01105 290 aaPredicted RBP11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 TRDNQ13061 729 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 ZNF569Q5MCW4 686 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 SPECC1LQ69YQ0 1117 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 CTAGE6Q86UF2 777 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 CTAGE4Q8IX94 777 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 IGSF22Q8N9C0 903 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 LEMD3Q9Y2U8 911 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 TACC3Q9Y6A5 838 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 MYH13Q9UKX3 1938 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 BRCA2P51587 3418 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 PRDM1O75626 825 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 RAD17O75943 681 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 CMA1P23946 247 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 CACNB3P54284 484 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 WDR93Q6P2C0 686 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 CCDC125Q86Z20 511 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 KIAA0825Q8IV33 1275 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 DHX37Q8IY37 1157 aaKnown RBP11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 C7orf43Q8WVR3 580 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 NSUN4Q96CB9 384 aaKnown RBP11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 MTFR1LQ9H019 292 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 A1CFQ9NQ94 594 aaKnown RBP11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 POLR3EQ9NVU0 708 aa11.42□□□□□ -0.58
HMGCLL1-205ENST00000398661 CTAGE9A4FU28 777 aa11.41□□□□□ -0.58
HMGCLL1-205ENST00000398661 INPP5BP32019 993 aa11.41□□□□□ -0.58
HMGCLL1-205ENST00000398661 WHAMMP3Q1A5X7 153 aa11.41□□□□□ -0.58
HMGCLL1-205ENST00000398661 GBP6Q6ZN66 633 aa11.41□□□□□ -0.58
HMGCLL1-205ENST00000398661 DZIP1Q86YF9 867 aaKnown RBP11.41□□□□□ -0.58
HMGCLL1-205ENST00000398661 TTLL6Q8N841 843 aa11.41□□□□□ -0.58
HMGCLL1-205ENST00000398661 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms