RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 A0A0G2JMZ2 1700 aa30.03■■■□□ 2.4
U2AF1-203ENST00000398137 SPDYE16A6NNV3 312 aaPredicted RBP30.03■■■□□ 2.4
U2AF1-203ENST00000398137 SLC34A2O95436 690 aa30.03■■■□□ 2.4
U2AF1-203ENST00000398137 FGRP09769 529 aa30.03■■■□□ 2.4
U2AF1-203ENST00000398137 FAM47AQ5JRC9 791 aa30.03■■■□□ 2.4
U2AF1-203ENST00000398137 RABGAP1Q9Y3P9 1069 aa30.03■■■□□ 2.4
U2AF1-203ENST00000398137 PARP14Q460N5 1801 aa30.03■■■□□ 2.4
U2AF1-203ENST00000398137 SLC27A2O14975 620 aa30.02■■■□□ 2.4
U2AF1-203ENST00000398137 RANBP6O60518 1105 aaKnown RBP30.02■■■□□ 2.4
U2AF1-203ENST00000398137 CYP2B6P20813 491 aa30.02■■■□□ 2.4
U2AF1-203ENST00000398137 MAPK4P31152 587 aa30.02■■■□□ 2.4
U2AF1-203ENST00000398137 NECTIN1Q15223 517 aa30.02■■■□□ 2.4
U2AF1-203ENST00000398137 C8orf34Q49A92 452 aa30.02■■■□□ 2.4
U2AF1-203ENST00000398137 CREB3L3Q68CJ9 461 aa30.02■■■□□ 2.4
U2AF1-203ENST00000398137 GPR142Q7Z601 462 aa30.02■■■□□ 2.4
U2AF1-203ENST00000398137 HMGCRP04035 888 aa30.01■■■□□ 2.39
U2AF1-203ENST00000398137 PCP11498 1178 aaKnown RBP30.01■■■□□ 2.39
U2AF1-203ENST00000398137 MORN1Q5T089 497 aa30.01■■■□□ 2.39
U2AF1-203ENST00000398137 DEFB118Q96PH6 123 aa30.01■■■□□ 2.39
U2AF1-203ENST00000398137 TSPY3P0CV98 308 aa30■■■□□ 2.39
U2AF1-203ENST00000398137 TSPY8P0CW00 308 aa30■■■□□ 2.39
U2AF1-203ENST00000398137 TFAP4Q01664 338 aa30■■■□□ 2.39
U2AF1-203ENST00000398137 NUDT12Q9BQG2 462 aa30■■■□□ 2.39
U2AF1-203ENST00000398137 GNL3Q9BVP2 549 aaKnown RBP eCLIP30■■■□□ 2.39
U2AF1-203ENST00000398137 CRISPLD2Q9H0B8 497 aa30■■■□□ 2.39
U2AF1-203ENST00000398137 TMX2Q9Y320 296 aa30■■■□□ 2.39
U2AF1-203ENST00000398137 PLIN4Q96Q06 1357 aa30■■■□□ 2.39
U2AF1-203ENST00000398137 TSPY2A6NKD2 308 aa29.99■■■□□ 2.39
U2AF1-203ENST00000398137 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.99■■■□□ 2.39
U2AF1-203ENST00000398137 XRCC5P13010 732 aaKnown RBP29.98■■■□□ 2.39
U2AF1-203ENST00000398137 ICA1Q05084 483 aa29.98■■■□□ 2.39
U2AF1-203ENST00000398137 MAP3K21Q5TCX8 1036 aa29.98■■■□□ 2.39
U2AF1-203ENST00000398137 STOX1Q6ZVD7 989 aa29.98■■■□□ 2.39
U2AF1-203ENST00000398137 PLEKHH3Q7Z736 793 aa29.98■■■□□ 2.39
U2AF1-203ENST00000398137 SOCS4Q8WXH5 440 aa29.98■■■□□ 2.39
U2AF1-203ENST00000398137 B4E1Z4 1266 aa29.97■■■□□ 2.39
U2AF1-203ENST00000398137 CCL14Q16627 93 aa29.97■■■□□ 2.39
U2AF1-203ENST00000398137 RNF20Q5VTR2 975 aa29.97■■■□□ 2.39
U2AF1-203ENST00000398137 NEDD1Q8NHV4 660 aa29.97■■■□□ 2.39
U2AF1-203ENST00000398137 E7EWF7 191 aa29.96■■■□□ 2.39
U2AF1-203ENST00000398137 ESR2Q92731 530 aa29.96■■■□□ 2.39
U2AF1-203ENST00000398137 VCPKMTQ9H867 229 aa29.96■■■□□ 2.39
U2AF1-203ENST00000398137 CNNM2Q9H8M5 875 aa29.96■■■□□ 2.39
U2AF1-203ENST00000398137 IGKV6D-41A0A0C4DH26 115 aa29.95■■■□□ 2.39
U2AF1-203ENST00000398137 KDM4AO75164 1064 aa29.95■■■□□ 2.39
U2AF1-203ENST00000398137 FARP2O94887 1054 aaPredicted RBP29.95■■■□□ 2.39
U2AF1-203ENST00000398137 EEF2P13639 858 aaKnown RBP29.95■■■□□ 2.39
U2AF1-203ENST00000398137 COG2Q14746 738 aa29.95■■■□□ 2.39
U2AF1-203ENST00000398137 SPICE1Q8N0Z3 855 aa29.95■■■□□ 2.39
U2AF1-203ENST00000398137 USP26Q9BXU7 913 aa29.95■■■□□ 2.39
U2AF1-203ENST00000398137 KRT23Q9C075 422 aa29.95■■■□□ 2.39
U2AF1-203ENST00000398137 KANSL2Q9H9L4 492 aa29.95■■■□□ 2.39
U2AF1-203ENST00000398137 RPTORQ8N122 1335 aa29.95■■■□□ 2.38
U2AF1-203ENST00000398137 NMT2O60551 498 aa29.94■■■□□ 2.38
U2AF1-203ENST00000398137 SEC24BO95487 1268 aa29.94■■■□□ 2.38
U2AF1-203ENST00000398137 HSPA4P34932 840 aa29.94■■■□□ 2.38
U2AF1-203ENST00000398137 ATP2B2Q01814 1243 aa29.94■■■□□ 2.38
U2AF1-203ENST00000398137 LPAR1Q92633 364 aa29.94■■■□□ 2.38
U2AF1-203ENST00000398137 CEP95Q96GE4 821 aa29.94■■■□□ 2.38
U2AF1-203ENST00000398137 ARHGEF10LQ9HCE6 1279 aa29.94■■■□□ 2.38
U2AF1-203ENST00000398137 ALPK3Q96L96 1907 aa29.93■■■□□ 2.38
U2AF1-203ENST00000398137 EPB41L2O43491 1005 aaKnown RBP29.93■■■□□ 2.38
U2AF1-203ENST00000398137 TRDNQ13061 729 aa29.93■■■□□ 2.38
U2AF1-203ENST00000398137 RALYLQ86SE5 291 aaKnown RBP29.93■■■□□ 2.38
U2AF1-203ENST00000398137 RASEFQ8IZ41 740 aa29.93■■■□□ 2.38
U2AF1-203ENST00000398137 TANGO6Q9C0B7 1094 aa29.93■■■□□ 2.38
U2AF1-203ENST00000398137 COL11A1P12107 1806 aaPredicted RBP29.92■■■□□ 2.38
U2AF1-203ENST00000398137 H0YGN5 161 aa29.92■■■□□ 2.38
U2AF1-203ENST00000398137 TFRCP02786 760 aaKnown RBP29.92■■■□□ 2.38
U2AF1-203ENST00000398137 PTPREP23469 700 aa29.92■■■□□ 2.38
U2AF1-203ENST00000398137 RGS2P41220 211 aa29.92■■■□□ 2.38
U2AF1-203ENST00000398137 MNX1P50219 401 aaPredicted RBP29.92■■■□□ 2.38
U2AF1-203ENST00000398137 CCNA1P78396 465 aa29.92■■■□□ 2.38
U2AF1-203ENST00000398137 MAP2K5Q13163 448 aa29.92■■■□□ 2.38
U2AF1-203ENST00000398137 HMX1Q9NP08 348 aaPredicted RBP29.92■■■□□ 2.38
U2AF1-203ENST00000398137 MTMR4Q9NYA4 1195 aa29.92■■■□□ 2.38
U2AF1-203ENST00000398137 FLRT1Q9NZU1 646 aa29.92■■■□□ 2.38
U2AF1-203ENST00000398137 EIF5BO60841 1220 aaKnown RBP29.91■■■□□ 2.38
U2AF1-203ENST00000398137 PRKAR2AP13861 404 aaKnown RBP29.91■■■□□ 2.38
U2AF1-203ENST00000398137 ZKSCAN1P17029 563 aaPredicted RBP29.91■■■□□ 2.38
U2AF1-203ENST00000398137 DSG3P32926 999 aa29.91■■■□□ 2.38
U2AF1-203ENST00000398137 CCAR1Q8IX12 1150 aaKnown RBP29.91■■■□□ 2.38
U2AF1-203ENST00000398137 NCOA7Q8NI08 942 aa29.91■■■□□ 2.38
U2AF1-203ENST00000398137 DIS3LQ8TF46 1054 aaKnown RBP29.91■■■□□ 2.38
U2AF1-203ENST00000398137 APBA2Q99767 749 aa29.91■■■□□ 2.38
U2AF1-203ENST00000398137 MOV10L1Q9BXT6 1211 aaKnown RBP29.91■■■□□ 2.38
U2AF1-203ENST00000398137 IL17RBQ9NRM6 502 aa29.91■■■□□ 2.38
U2AF1-203ENST00000398137 HOXC10Q9NYD6 342 aa29.91■■■□□ 2.38
U2AF1-203ENST00000398137 CACNB2Q08289 660 aaPredicted RBP29.9■■■□□ 2.38
U2AF1-203ENST00000398137 GRB14Q14449 540 aa29.9■■■□□ 2.38
U2AF1-203ENST00000398137 CYB5R4Q7L1T6 521 aa29.9■■■□□ 2.38
U2AF1-203ENST00000398137 ATG4CQ96DT6 458 aa29.9■■■□□ 2.38
U2AF1-203ENST00000398137 ZKSCAN3Q9BRR0 538 aa29.9■■■□□ 2.38
U2AF1-203ENST00000398137 ZNF236Q9UL36 1845 aa29.89■■■□□ 2.38
U2AF1-203ENST00000398137 MCCP23508 829 aa29.89■■■□□ 2.38
U2AF1-203ENST00000398137 NT5C2P49902 561 aa29.89■■■□□ 2.38
U2AF1-203ENST00000398137 KCNB2Q92953 911 aa29.89■■■□□ 2.38
U2AF1-203ENST00000398137 SH2D4AQ9H788 454 aa29.89■■■□□ 2.38
U2AF1-203ENST00000398137 ZSWIM5Q9P217 1185 aa29.89■■■□□ 2.38
U2AF1-203ENST00000398137 NYAP2Q9P242 653 aa29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms