RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 B3GALT4O96024 378 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 MT-CO1P00395 513 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 GHRHP01286 108 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 ASLP04424 464 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 TP53P04637 393 aaPredicted RBP2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 PGRP06401 933 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 ITGAVP06756 1048 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 RAG1P15918 1043 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 RHOQP17081 205 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 ITGA6P23229 1130 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 CYP2C19P33261 490 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 SOX18P35713 384 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 IGFALSP35858 605 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 HALP42357 657 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 HTR3AP46098 478 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 ZNF143P52747 638 aaPredicted RBP2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 KCNQ4P56696 695 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 IL2P60568 153 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 ATP11AP98196 1134 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 SFSWAPQ12872 951 aaKnown RBP2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 STK3Q13188 491 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 GRB10Q13322 594 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 BIRC3Q13489 604 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 BBS9Q3SYG4 887 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 WDR44Q5JSH3 913 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 EFCAB2Q5VUJ9 269 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 CDCA2Q69YH5 1023 aaPredicted RBP2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 HEATR6Q6AI08 1181 aaKnown RBP2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 MPRIPQ6WCQ1 1025 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 HFE2Q6ZVN8 426 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 DHX32Q7L7V1 743 aaKnown RBP2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 HDXQ7Z353 690 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 LYSMD3Q7Z3D4 306 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 PODNQ7Z5L7 613 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 FGD2Q7Z6J4 655 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 ADAT2Q7Z6V5 191 aaKnown RBP2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 PNMA8AQ86V59 439 aaPredicted RBP2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 IFNL2Q8IZJ0 200 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 VWA5B2Q8N398 1253 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 PARD3BQ8TEW8 1205 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 BSNDQ8WZ55 320 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 BHMTQ93088 406 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 TTC17Q96AE7 1141 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 ELMO3Q96BJ8 720 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 TNIP3Q96KP6 325 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 STRBPQ96SI9 672 aaKnown RBP2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 CDC5LQ99459 802 aaKnown RBP2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 HERPUD2Q9BSE4 406 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 KRTAP4-8Q9BYQ9 185 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 PBX4Q9BYU1 374 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 INO80BQ9C086 356 aaPredicted RBP2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 ZC3H12CQ9C0D7 883 aaKnown RBP2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 SLC52A2Q9HAB3 445 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 PLCB1Q9NQ66 1216 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 MAN1C1Q9NR34 630 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 LUZP4Q9P127 313 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 SAP30BPQ9UHR5 308 aaKnown RBP2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 ZNF214Q9UL59 606 aaPredicted RBP2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 ZBTB21Q9ULJ3 1066 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 GTF2A1LQ9UNN4 478 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 APOBEC2Q9Y235 224 aaKnown RBP2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 PPP2R3BQ9Y5P8 575 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 SENP3-EIF4A1A0A087X0R7 540 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 LOC102724428A0A0B4J2F2 783 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 DCDC2BA2VCK2 349 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 BLACEA4D250 179 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 CFAP69A5D8W1 941 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 J3QW42 95 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 M0R2C6 588 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 NOP56O00567 594 aaKnown RBP2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 TCERG1O14776 1098 aaKnown RBP2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 TNFRSF10CO14798 259 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 ERC2O15083 957 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 ATXN7O15265 892 aaPredicted RBP2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 PMM2O15305 246 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 SMNDC1O75940 238 aaKnown RBP eCLIP2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 PRKD3O94806 890 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 IL33O95760 270 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 APBA3O96018 575 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 ITGB2P05107 769 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 NEFMP07197 916 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 LDHCP07864 332 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 FGFR1P11362 822 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 COL6A1P12109 1028 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 PHKG2P15735 406 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 EIF2AK2P19525 551 aaKnown RBP2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 POU3F2P20265 443 aaPredicted RBP2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 SERPINB3P29508 390 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 POLR2BP30876 1174 aaKnown RBP2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 IARSP41252 1262 aaKnown RBP2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 SIK1P57059 783 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 GABREP78334 506 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 MLLT1Q03111 559 aaPredicted RBP2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 PDE4BQ07343 736 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 ADCY1Q08828 1119 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 TBC1D8BQ0IIM8 1120 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 ZNF252P-AS1Q0IIN9 211 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 GBX1Q14549 363 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 GRM3Q14832 879 aa2.61□□□□□ -1.99
HMGN2P39-201ENST00000398005 ZNF423Q2M1K9 1284 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms