RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 CDHR2Q9BYE9 1310 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 TOGARAM1Q9Y4F4 1720 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 LOC102724428A0A0B4J2F2 783 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 IFNAR1P17181 557 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 ERCC3P19447 782 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 MCM7P33993 719 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 RDXP35241 583 aaKnown RBP5.66□□□□□ -1.5
SSR1-202ENST00000397511 IL6STP40189 918 aaPredicted RBP5.66□□□□□ -1.5
SSR1-202ENST00000397511 SIK1P57059 783 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 GNG11P61952 73 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 NEDD9Q14511 834 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 MAP9Q49MG5 647 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 INTS5Q6P9B9 1019 aaKnown RBP5.66□□□□□ -1.5
SSR1-202ENST00000397511 SGMS1Q86VZ5 419 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 ENAHQ8N8S7 591 aaPredicted RBP5.66□□□□□ -1.5
SSR1-202ENST00000397511 HNRNPLLQ8WVV9 542 aaKnown RBP5.66□□□□□ -1.5
SSR1-202ENST00000397511 CELF1Q92879 486 aaKnown RBP5.66□□□□□ -1.5
SSR1-202ENST00000397511 CCDC102AQ96A19 550 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 GPR101Q96P66 508 aaPredicted RBP5.66□□□□□ -1.5
SSR1-202ENST00000397511 CPVLQ9H3G5 476 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 A1CFQ9NQ94 594 aaKnown RBP5.66□□□□□ -1.5
SSR1-202ENST00000397511 TUBE1Q9UJT0 475 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 TNS2Q63HR2 1409 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 SOWAHDA6NJG2 315 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 CUTAO60888 179 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 DEXIO95424 95 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 SCP2P22307 547 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 PRDX5P30044 214 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 LIFRP42702 1097 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 LIG3P49916 1009 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 TRIM65Q6PJ69 517 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 PIK3AP1Q6ZUJ8 805 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 RASGRP2Q7LDG7 609 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 SYMPKQ92797 1274 aaKnown RBP5.66□□□□□ -1.5
SSR1-202ENST00000397511 MED15Q96RN5 788 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 WDR24Q96S15 920 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 CNNM2Q9H8M5 875 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 CCDC87Q9NVE4 849 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 FBXO2Q9UK22 296 aaPredicted RBP5.66□□□□□ -1.5
SSR1-202ENST00000397511 MYH7P12883 1935 aa5.66□□□□□ -1.5
SSR1-202ENST00000397511 PARP4Q9UKK3 1724 aaKnown RBP5.65□□□□□ -1.5
SSR1-202ENST00000397511 STRCQ7RTU9 1775 aa5.65□□□□□ -1.5
SSR1-202ENST00000397511 GOLGA6L9A6NEM1 432 aa5.65□□□□□ -1.5
SSR1-202ENST00000397511 IRF6O14896 467 aa5.65□□□□□ -1.5
SSR1-202ENST00000397511 CD44P16070 742 aaKnown RBP5.65□□□□□ -1.5
SSR1-202ENST00000397511 MAP3K9P80192 1104 aa5.65□□□□□ -1.5
SSR1-202ENST00000397511 FMNL3Q8IVF7 1028 aa5.65□□□□□ -1.5
SSR1-202ENST00000397511 RASSF8Q8NHQ8 419 aa5.65□□□□□ -1.5
SSR1-202ENST00000397511 ESR2Q92731 530 aa5.65□□□□□ -1.5
SSR1-202ENST00000397511 KAT2BQ92831 832 aa5.65□□□□□ -1.5
SSR1-202ENST00000397511 GPKOWQ92917 476 aaPredicted RBP eCLIP5.65□□□□□ -1.52e-15■□□□□ 9.4
SSR1-202ENST00000397511 MIEF2Q96C03 454 aa5.65□□□□□ -1.5
SSR1-202ENST00000397511 BAG1Q99933 345 aaPredicted RBP5.65□□□□□ -1.5
SSR1-202ENST00000397511 BCL9O00512 1426 aa5.65□□□□□ -1.5
SSR1-202ENST00000397511 SLIT2O94813 1529 aa5.65□□□□□ -1.5
SSR1-202ENST00000397511 NEBLO76041 1014 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 ELF1P32519 619 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 NF2P35240 595 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 IRX1P78414 480 aaPredicted RBP5.65□□□□□ -1.51
SSR1-202ENST00000397511 C11orf91Q3C1V1 193 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 RILPL1Q5EBL4 403 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 TXNRD3Q86VQ6 643 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 FCHSD1Q86WN1 690 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 VSTM4Q8IW00 320 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 UIMC1Q96RL1 719 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 ZSCAN10Q96SZ4 725 aaPredicted RBP5.65□□□□□ -1.51
SSR1-202ENST00000397511 GBP3Q9H0R5 595 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 VPS16Q9H269 839 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 PLEKHA4Q9H4M7 779 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 SRP68Q9UHB9 627 aaKnown RBP5.65□□□□□ -1.51
SSR1-202ENST00000397511 MRFAP1Q9Y605 127 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 ABCC12Q96J65 1359 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 UBR2Q8IWV8 1755 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 BAZ2AQ9UIF9 1905 aaKnown RBP5.65□□□□□ -1.51
SSR1-202ENST00000397511 MYH2Q9UKX2 1941 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 EBAG9O00559 213 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 IKBKBO14920 756 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 CAMTA2O94983 1202 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 ABL1P00519 1130 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 COL4A1P02462 1669 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 C4AP0C0L4 1744 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 C4BP0C0L5 1744 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 PTPREP23469 700 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 TUBB4BP68371 445 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 PIP4K2BP78356 416 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 MDM2Q00987 491 aaPredicted RBP5.65□□□□□ -1.51
SSR1-202ENST00000397511 PTGDRQ13258 359 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 CAVIN4Q5BKX8 364 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 ANKRD18AQ8IVF6 992 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 MARCH10Q8NA82 808 aaPredicted RBP5.65□□□□□ -1.51
SSR1-202ENST00000397511 AFAP1L1Q8TED9 768 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 ZNF384Q8TF68 577 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 BPIFA3Q9BQP9 254 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 JPH2Q9BR39 696 aaPredicted RBP5.65□□□□□ -1.51
SSR1-202ENST00000397511 PLCD4Q9BRC7 762 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 FAM204AQ9H8W3 233 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 VEZTQ9HBM0 779 aa5.65□□□□□ -1.51
SSR1-202ENST00000397511 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.65□□□□□ -1.51
SSR1-202ENST00000397511 PUF60Q9UHX1 559 aaKnown RBP5.65□□□□□ -1.51
SSR1-202ENST00000397511 PPP2R2CQ9Y2T4 447 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms