RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 NFKBIBQ15653 356 aa21.96■■□□□ 1.11
TSPAN4-204ENST00000397404 KRT40Q6A162 431 aa21.96■■□□□ 1.11
TSPAN4-204ENST00000397404 USP17L2Q6R6M4 530 aa21.96■■□□□ 1.11
TSPAN4-204ENST00000397404 STAG2Q8N3U4 1231 aa21.96■■□□□ 1.11
TSPAN4-204ENST00000397404 FOXP1Q9H334 677 aaPredicted RBP21.96■■□□□ 1.11
TSPAN4-204ENST00000397404 VCPKMTQ9H867 229 aa21.96■■□□□ 1.11
TSPAN4-204ENST00000397404 CFAP45Q9UL16 551 aa21.96■■□□□ 1.11
TSPAN4-204ENST00000397404 ATAD5Q96QE3 1844 aa21.96■■□□□ 1.11
TSPAN4-204ENST00000397404 MMP1P03956 469 aa21.96■■□□□ 1.11
TSPAN4-204ENST00000397404 BMP3P12645 472 aa21.96■■□□□ 1.11
TSPAN4-204ENST00000397404 IREB2P48200 963 aaKnown RBP21.96■■□□□ 1.11
TSPAN4-204ENST00000397404 KRT85P78386 507 aa21.96■■□□□ 1.11
TSPAN4-204ENST00000397404 PKN1Q16512 942 aa21.96■■□□□ 1.11
TSPAN4-204ENST00000397404 WRNIP1Q96S55 665 aa21.96■■□□□ 1.11
TSPAN4-204ENST00000397404 KIAA1683Q9H0B3 1180 aa21.96■■□□□ 1.11
TSPAN4-204ENST00000397404 CCDC96Q2M329 555 aa21.95■■□□□ 1.1
TSPAN4-204ENST00000397404 PPP1R18Q6NYC8 613 aa21.95■■□□□ 1.1
TSPAN4-204ENST00000397404 BTNL9Q6UXG8 535 aa21.95■■□□□ 1.1
TSPAN4-204ENST00000397404 CCDC82Q8N4S0 544 aa21.95■■□□□ 1.1
TSPAN4-204ENST00000397404 ZNF396Q96N95 335 aaPredicted RBP21.95■■□□□ 1.1
TSPAN4-204ENST00000397404 SCAND2PQ9GZW5 306 aaPredicted RBP21.95■■□□□ 1.1
TSPAN4-204ENST00000397404 GLT8D2Q9H1C3 349 aa21.95■■□□□ 1.1
TSPAN4-204ENST00000397404 NDUFB10O96000 172 aa21.94■■□□□ 1.1
TSPAN4-204ENST00000397404 U2AF2P26368 475 aaKnown RBP eCLIP21.94■■□□□ 1.1
TSPAN4-204ENST00000397404 RESTQ13127 1097 aa21.94■■□□□ 1.1
TSPAN4-204ENST00000397404 GNL2Q13823 731 aaKnown RBP21.94■■□□□ 1.1
TSPAN4-204ENST00000397404 MAP3K11Q16584 847 aa21.94■■□□□ 1.1
TSPAN4-204ENST00000397404 CHURC1Q8WUH1 139 aa21.94■■□□□ 1.1
TSPAN4-204ENST00000397404 PNMA2Q9UL42 364 aa21.94■■□□□ 1.1
TSPAN4-204ENST00000397404 POLR2AP24928 1970 aaKnown RBP21.93■■□□□ 1.1
TSPAN4-204ENST00000397404 C19orf81C9J6K1 198 aa21.93■■□□□ 1.1
TSPAN4-204ENST00000397404 SLURP2P0DP57 97 aa21.93■■□□□ 1.1
TSPAN4-204ENST00000397404 SKOR2Q2VWA4 1001 aaPredicted RBP21.93■■□□□ 1.1
TSPAN4-204ENST00000397404 MCTP1Q6DN14 999 aa21.93■■□□□ 1.1
TSPAN4-204ENST00000397404 FAM160B2Q86V87 743 aa21.93■■□□□ 1.1
TSPAN4-204ENST00000397404 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.93■■□□□ 1.11e-7■■■□□ 19.2
TSPAN4-204ENST00000397404 RBM46Q8TBY0 533 aaKnown RBP21.93■■□□□ 1.1
TSPAN4-204ENST00000397404 PHF20Q9BVI0 1012 aa21.93■■□□□ 1.1
TSPAN4-204ENST00000397404 BARHL2Q9NY43 387 aa21.93■■□□□ 1.1
TSPAN4-204ENST00000397404 PNMA6FA0A0J9YX94 578 aa21.92■■□□□ 1.1
TSPAN4-204ENST00000397404 POTECB2RU33 542 aa21.92■■□□□ 1.1
TSPAN4-204ENST00000397404 USP17L10C9JJH3 530 aa21.92■■□□□ 1.1
TSPAN4-204ENST00000397404 WDR46O15213 610 aaKnown RBP21.92■■□□□ 1.1
TSPAN4-204ENST00000397404 CYTH3O43739 400 aa21.92■■□□□ 1.1
TSPAN4-204ENST00000397404 JAG1P78504 1218 aa21.92■■□□□ 1.1
TSPAN4-204ENST00000397404 MAP3K9P80192 1104 aa21.92■■□□□ 1.1
TSPAN4-204ENST00000397404 KIF23Q02241 960 aaPredicted RBP21.92■■□□□ 1.1
TSPAN4-204ENST00000397404 CLEC10AQ8IUN9 316 aa21.92■■□□□ 1.1
TSPAN4-204ENST00000397404 CMTR1Q8N1G2 835 aaKnown RBP21.92■■□□□ 1.1
TSPAN4-204ENST00000397404 TMEM87AQ8NBN3 555 aa21.92■■□□□ 1.1
TSPAN4-204ENST00000397404 BICD2Q8TD16 824 aa21.92■■□□□ 1.1
TSPAN4-204ENST00000397404 MTMR8Q96EF0 704 aa21.92■■□□□ 1.1
TSPAN4-204ENST00000397404 FEZ1Q99689 392 aa21.92■■□□□ 1.1
TSPAN4-204ENST00000397404 CSADQ9Y600 493 aa21.92■■□□□ 1.1
TSPAN4-204ENST00000397404 A0A1W2PRG0 241 aa21.91■■□□□ 1.1
TSPAN4-204ENST00000397404 ESYT2A0FGR8 921 aa21.91■■□□□ 1.1
TSPAN4-204ENST00000397404 FDX1P10109 184 aa21.91■■□□□ 1.1
TSPAN4-204ENST00000397404 GNA11P29992 359 aa21.91■■□□□ 1.1
TSPAN4-204ENST00000397404 STAT2P52630 851 aa21.91■■□□□ 1.1
TSPAN4-204ENST00000397404 EAPPQ56P03 285 aaPredicted RBP21.91■■□□□ 1.1
TSPAN4-204ENST00000397404 LDHDQ86WU2 507 aa21.91■■□□□ 1.1
TSPAN4-204ENST00000397404 FEM1BQ9UK73 627 aa21.91■■□□□ 1.1
TSPAN4-204ENST00000397404 SSC5DA1L4H1 1573 aa21.91■■□□□ 1.1
TSPAN4-204ENST00000397404 ZBTB5O15062 677 aa21.9■■□□□ 1.1
TSPAN4-204ENST00000397404 GOLGA8HP0CJ92 632 aa21.9■■□□□ 1.1
TSPAN4-204ENST00000397404 PTPRAP18433 802 aa21.9■■□□□ 1.1
TSPAN4-204ENST00000397404 KRT2P35908 639 aa21.9■■□□□ 1.1
TSPAN4-204ENST00000397404 FKBP1BP68106 108 aa21.9■■□□□ 1.1
TSPAN4-204ENST00000397404 DAGLBQ8NCG7 672 aa21.9■■□□□ 1.1
TSPAN4-204ENST00000397404 ZNF280CQ8ND82 737 aa21.9■■□□□ 1.1
TSPAN4-204ENST00000397404 CDCA5Q96FF9 252 aa21.9■■□□□ 1.1
TSPAN4-204ENST00000397404 MTMR7Q9Y216 660 aa21.9■■□□□ 1.1
TSPAN4-204ENST00000397404 ELP1O95163 1332 aa21.9■■□□□ 1.1
TSPAN4-204ENST00000397404 USP2O75604 605 aaPredicted RBP21.9■■□□□ 1.1
TSPAN4-204ENST00000397404 INPP5BP32019 993 aa21.9■■□□□ 1.1
TSPAN4-204ENST00000397404 MCTP2Q6DN12 878 aa21.9■■□□□ 1.1
TSPAN4-204ENST00000397404 ARMC9Q7Z3E5 817 aa21.9■■□□□ 1.1
TSPAN4-204ENST00000397404 NOSTRINQ8IVI9 506 aa21.9■■□□□ 1.1
TSPAN4-204ENST00000397404 ANKRD13AQ8IZ07 590 aa21.9■■□□□ 1.1
TSPAN4-204ENST00000397404 ADGRF4Q8IZF3 695 aa21.9■■□□□ 1.1
TSPAN4-204ENST00000397404 C12orf42Q96LP6 360 aa21.9■■□□□ 1.1
TSPAN4-204ENST00000397404 FRMPD2Q68DX3 1309 aaPredicted RBP21.89■■□□□ 1.1
TSPAN4-204ENST00000397404 BACE1P56817 501 aa21.89■■□□□ 1.09
TSPAN4-204ENST00000397404 SHROOM1Q2M3G4 852 aaPredicted RBP21.89■■□□□ 1.09
TSPAN4-204ENST00000397404 FOXD4L5Q5VV16 416 aaPredicted RBP21.89■■□□□ 1.09
TSPAN4-204ENST00000397404 FERMT3Q86UX7 667 aa21.89■■□□□ 1.09
TSPAN4-204ENST00000397404 DIS3L2Q8IYB7 885 aaKnown RBP21.89■■□□□ 1.09
TSPAN4-204ENST00000397404 FOXD4L4Q8WXT5 416 aaPredicted RBP21.89■■□□□ 1.09
TSPAN4-204ENST00000397404 ANP32EQ9BTT0 268 aa21.89■■□□□ 1.09
TSPAN4-204ENST00000397404 JMJD4Q9H9V9 463 aa21.89■■□□□ 1.09
TSPAN4-204ENST00000397404 GPCPD1Q9NPB8 672 aa21.89■■□□□ 1.09
TSPAN4-204ENST00000397404 SCAF8Q9UPN6 1271 aaKnown RBP21.89■■□□□ 1.09
TSPAN4-204ENST00000397404 ADM5C9JUS6 153 aa21.88■■□□□ 1.09
TSPAN4-204ENST00000397404 PPFIA3O75145 1194 aa21.88■■□□□ 1.09
TSPAN4-204ENST00000397404 NCLP19338 710 aaKnown RBP21.88■■□□□ 1.09
TSPAN4-204ENST00000397404 ECE1P42892 770 aa21.88■■□□□ 1.09
TSPAN4-204ENST00000397404 NLRP5P59047 1200 aa21.88■■□□□ 1.09
TSPAN4-204ENST00000397404 RILPL1Q5EBL4 403 aa21.88■■□□□ 1.09
TSPAN4-204ENST00000397404 SYDE2Q5VT97 1194 aa21.88■■□□□ 1.09
TSPAN4-204ENST00000397404 KCTD1Q719H9 257 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms