RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 RNF166Q96A37 237 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-208ENST00000397204 EAF2Q96CJ1 260 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-208ENST00000397204 FEZ1Q99689 392 aa10.65□□□□□ -0.7
CAPN3-208ENST00000397204 HOXC10Q9NYD6 342 aa10.65□□□□□ -0.7
CAPN3-208ENST00000397204 STXBP5LQ9Y2K9 1186 aa10.65□□□□□ -0.7
CAPN3-208ENST00000397204 IVNS1ABPQ9Y6Y0 642 aa10.65□□□□□ -0.7
CAPN3-208ENST00000397204 STRNO43815 780 aa10.64□□□□□ -0.71
CAPN3-208ENST00000397204 RAB3GAP1Q15042 981 aa10.64□□□□□ -0.71
CAPN3-208ENST00000397204 LRRC26Q2I0M4 334 aa10.64□□□□□ -0.71
CAPN3-208ENST00000397204 MAGEB6Q8N7X4 407 aa10.64□□□□□ -0.71
CAPN3-208ENST00000397204 SLC4A5Q9BY07 1137 aa10.64□□□□□ -0.71
CAPN3-208ENST00000397204 MTMR10Q9NXD2 777 aa10.64□□□□□ -0.71
CAPN3-208ENST00000397204 TLR7Q9NYK1 1049 aaKnown RBP10.64□□□□□ -0.71
CAPN3-208ENST00000397204 LOC285556D6RIA3 1793 aa10.64□□□□□ -0.71
CAPN3-208ENST00000397204 UNC80Q8N2C7 3258 aa10.64□□□□□ -0.71
CAPN3-208ENST00000397204 VCAM1P19320 739 aa10.63□□□□□ -0.71
CAPN3-208ENST00000397204 PLCD1P51178 756 aa10.63□□□□□ -0.71
CAPN3-208ENST00000397204 COG2Q14746 738 aa10.63□□□□□ -0.71
CAPN3-208ENST00000397204 ZYXQ15942 572 aaKnown RBP10.63□□□□□ -0.71
CAPN3-208ENST00000397204 PROX2Q3B8N5 592 aa10.63□□□□□ -0.71
CAPN3-208ENST00000397204 WDR78Q5VTH9 848 aa10.63□□□□□ -0.71
CAPN3-208ENST00000397204 FAM109BQ6ICB4 259 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-208ENST00000397204 ERC1Q8IUD2 1116 aa10.63□□□□□ -0.71
CAPN3-208ENST00000397204 FTSJ3Q8IY81 847 aaKnown RBP10.63□□□□□ -0.71
CAPN3-208ENST00000397204 ACER1Q8TDN7 264 aa10.63□□□□□ -0.71
CAPN3-208ENST00000397204 LPAR1Q92633 364 aa10.63□□□□□ -0.71
CAPN3-208ENST00000397204 SENP6Q9GZR1 1112 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-208ENST00000397204 BTBD7Q9P203 1132 aa10.63□□□□□ -0.71
CAPN3-208ENST00000397204 IGHA2P01877 340 aa10.62□□□□□ -0.71
CAPN3-208ENST00000397204 POLR3DP05423 398 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-208ENST00000397204 CNGA1P29973 690 aa10.62□□□□□ -0.71
CAPN3-208ENST00000397204 SHMT1P34896 483 aa10.62□□□□□ -0.71
CAPN3-208ENST00000397204 GRB14Q14449 540 aa10.62□□□□□ -0.71
CAPN3-208ENST00000397204 TTF1Q15361 905 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-208ENST00000397204 HSP90AB4PQ58FF6 505 aa10.62□□□□□ -0.71
CAPN3-208ENST00000397204 ARRDC4Q8NCT1 418 aa10.62□□□□□ -0.71
CAPN3-208ENST00000397204 LBHD1Q9BQE6 289 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-208ENST00000397204 RIOK1Q9BRS2 568 aaKnown RBP10.62□□□□□ -0.71
CAPN3-208ENST00000397204 ANTXR1Q9H6X2 564 aa10.62□□□□□ -0.71
CAPN3-208ENST00000397204 C1orf115Q9H7X2 142 aa10.62□□□□□ -0.71
CAPN3-208ENST00000397204 FLRT1Q9NZU1 646 aa10.62□□□□□ -0.71
CAPN3-208ENST00000397204 DDX20Q9UHI6 824 aaKnown RBP10.62□□□□□ -0.71
CAPN3-208ENST00000397204 NDUFB9Q9Y6M9 179 aa10.62□□□□□ -0.71
CAPN3-208ENST00000397204 MAGEB6P1A0A0J9YX57 407 aa10.61□□□□□ -0.71
CAPN3-208ENST00000397204 DNM1LO00429 736 aa10.61□□□□□ -0.71
CAPN3-208ENST00000397204 CYP2C19P33261 490 aa10.61□□□□□ -0.71
CAPN3-208ENST00000397204 GUCY1A2P33402 732 aa10.61□□□□□ -0.71
CAPN3-208ENST00000397204 MDM2Q00987 491 aaPredicted RBP10.61□□□□□ -0.71
CAPN3-208ENST00000397204 GABPAQ06546 454 aa10.61□□□□□ -0.71
CAPN3-208ENST00000397204 SLC9C2Q5TAH2 1124 aa10.61□□□□□ -0.71
CAPN3-208ENST00000397204 OLFML2BQ68BL8 750 aa10.61□□□□□ -0.71
CAPN3-208ENST00000397204 Q7L0L9 218 aa10.61□□□□□ -0.71
CAPN3-208ENST00000397204 DPP9Q86TI2 863 aa10.61□□□□□ -0.71
CAPN3-208ENST00000397204 AACSQ86V21 672 aa10.61□□□□□ -0.71
CAPN3-208ENST00000397204 ITPRIPQ8IWB1 547 aa10.61□□□□□ -0.71
CAPN3-208ENST00000397204 MB21D1Q8N884 522 aa10.61□□□□□ -0.71
CAPN3-208ENST00000397204 SHCBP1Q8NEM2 672 aa10.61□□□□□ -0.71
CAPN3-208ENST00000397204 NPLOC4Q8TAT6 608 aa10.61□□□□□ -0.71
CAPN3-208ENST00000397204 CRNKL1Q9BZJ0 848 aaKnown RBP10.61□□□□□ -0.71
CAPN3-208ENST00000397204 RPAP3Q9H6T3 665 aaPredicted RBP10.61□□□□□ -0.71
CAPN3-208ENST00000397204 SLC5A4Q9NY91 659 aa10.61□□□□□ -0.71
CAPN3-208ENST00000397204 SEPT2Q15019 361 aa10.6□□□□□ -0.71
CAPN3-208ENST00000397204 CEP85Q6P2H3 762 aa10.6□□□□□ -0.71
CAPN3-208ENST00000397204 ABRAQ8N0Z2 381 aa10.6□□□□□ -0.71
CAPN3-208ENST00000397204 MOV10L1Q9BXT6 1211 aaKnown RBP10.6□□□□□ -0.71
CAPN3-208ENST00000397204 MROH8Q9H579 483 aa10.6□□□□□ -0.71
CAPN3-208ENST00000397204 MCM9Q9NXL9 1143 aa10.6□□□□□ -0.71
CAPN3-208ENST00000397204 PRKAG2Q9UGJ0 569 aa10.6□□□□□ -0.71
CAPN3-208ENST00000397204 PLXNB2O15031 1838 aa10.6□□□□□ -0.71
CAPN3-208ENST00000397204 ATAD5Q96QE3 1844 aa10.59□□□□□ -0.71
CAPN3-208ENST00000397204 ALPK3Q96L96 1907 aa10.59□□□□□ -0.71
CAPN3-208ENST00000397204 A0A1W2PRG0 241 aa10.59□□□□□ -0.71
CAPN3-208ENST00000397204 MPHOSPH10O00566 681 aaKnown RBP10.59□□□□□ -0.71
CAPN3-208ENST00000397204 RLBP1P12271 317 aa10.59□□□□□ -0.71
CAPN3-208ENST00000397204 CYBAP13498 195 aa10.59□□□□□ -0.71
CAPN3-208ENST00000397204 ADORA2AP29274 412 aa10.59□□□□□ -0.71
CAPN3-208ENST00000397204 TMEM179Q6ZVK1 233 aa10.59□□□□□ -0.71
CAPN3-208ENST00000397204 TRPV1Q8NER1 839 aa10.59□□□□□ -0.71
CAPN3-208ENST00000397204 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.59□□□□□ -0.71
CAPN3-208ENST00000397204 SPATC1LQ9H0A9 340 aa10.59□□□□□ -0.71
CAPN3-208ENST00000397204 SWAP70Q9UH65 585 aa10.59□□□□□ -0.71
CAPN3-208ENST00000397204 EXOC6BQ9Y2D4 811 aa10.59□□□□□ -0.71
CAPN3-208ENST00000397204 SIPA1L1O43166 1804 aa10.58□□□□□ -0.72
CAPN3-208ENST00000397204 SEPT4O43236 478 aa10.58□□□□□ -0.72
CAPN3-208ENST00000397204 PDE6AP16499 860 aa10.58□□□□□ -0.72
CAPN3-208ENST00000397204 ERCC3P19447 782 aa10.58□□□□□ -0.72
CAPN3-208ENST00000397204 RTP1P59025 263 aa10.58□□□□□ -0.72
CAPN3-208ENST00000397204 SLC39A5Q6ZMH5 540 aa10.58□□□□□ -0.72
CAPN3-208ENST00000397204 CLASRPQ8N2M8 674 aaKnown RBP10.58□□□□□ -0.72
CAPN3-208ENST00000397204 RHPN1Q8TCX5 695 aa10.58□□□□□ -0.72
CAPN3-208ENST00000397204 CCDC17Q96LX7 622 aa10.58□□□□□ -0.72
CAPN3-208ENST00000397204 SH2D4AQ9H788 454 aa10.58□□□□□ -0.72
CAPN3-208ENST00000397204 CDHR5Q9HBB8 845 aa10.58□□□□□ -0.72
CAPN3-208ENST00000397204 DCP1AQ9NPI6 582 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-208ENST00000397204 ATP8A2Q9NTI2 1148 aa10.58□□□□□ -0.72
CAPN3-208ENST00000397204 VCANP13611 3396 aa10.58□□□□□ -0.72
CAPN3-208ENST00000397204 TCRBV5S4A2TA0A5A2 114 aa10.57□□□□□ -0.72
CAPN3-208ENST00000397204 KBTBD13C9JR72 458 aa10.57□□□□□ -0.72
CAPN3-208ENST00000397204 BHMG1C9JSJ3 638 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-208ENST00000397204 COBLO75128 1261 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms