RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 DBNDD1Q9H9R9 158 aa18.38■□□□□ 0.53
SNX6-202ENST00000396526 BAZ2BQ9UIF8 2168 aaKnown RBP18.38■□□□□ 0.53
SNX6-202ENST00000396526 HDLBPQ00341 1268 aaKnown RBP18.38■□□□□ 0.53
SNX6-202ENST00000396526 CERS5Q8N5B7 392 aa18.38■□□□□ 0.53
SNX6-202ENST00000396526 DAGLBQ8NCG7 672 aa18.38■□□□□ 0.53
SNX6-202ENST00000396526 DLEC1Q9Y238 1755 aa18.37■□□□□ 0.53
SNX6-202ENST00000396526 hCG_1984214I3L0E3 225 aa18.37■□□□□ 0.53
SNX6-202ENST00000396526 SLFN14P0C7P3 912 aa18.37■□□□□ 0.53
SNX6-202ENST00000396526 NPY5RQ15761 445 aa18.37■□□□□ 0.53
SNX6-202ENST00000396526 SLC15A2Q16348 729 aa18.37■□□□□ 0.53
SNX6-202ENST00000396526 ASPRV1Q53RT3 343 aa18.37■□□□□ 0.53
SNX6-202ENST00000396526 ZNF713Q8N859 430 aaPredicted RBP18.37■□□□□ 0.53
SNX6-202ENST00000396526 DHX36Q9H2U1 1008 aaKnown RBP18.37■□□□□ 0.53
SNX6-202ENST00000396526 GOLGA8HP0CJ92 632 aa18.37■□□□□ 0.53
SNX6-202ENST00000396526 CRKP46108 304 aa18.37■□□□□ 0.53
SNX6-202ENST00000396526 GRIN1Q05586 938 aa18.37■□□□□ 0.53
SNX6-202ENST00000396526 EARS2Q5JPH6 523 aaKnown RBP18.37■□□□□ 0.53
SNX6-202ENST00000396526 KRT25Q7Z3Z0 450 aa18.37■□□□□ 0.53
SNX6-202ENST00000396526 SHISA4Q96DD7 197 aa18.37■□□□□ 0.53
SNX6-202ENST00000396526 OSBPL5Q9H0X9 879 aaPredicted RBP18.37■□□□□ 0.53
SNX6-202ENST00000396526 MTMR4Q9NYA4 1195 aa18.37■□□□□ 0.53
SNX6-202ENST00000396526 IMPACTQ9P2X3 320 aa18.37■□□□□ 0.53
SNX6-202ENST00000396526 NAV1Q8NEY1 1877 aa18.37■□□□□ 0.53
SNX6-202ENST00000396526 TERF1P54274 439 aa18.36■□□□□ 0.53
SNX6-202ENST00000396526 FILIP1Q7Z7B0 1213 aa18.36■□□□□ 0.53
SNX6-202ENST00000396526 HOMER1Q86YM7 354 aa18.36■□□□□ 0.53
SNX6-202ENST00000396526 SYMPKQ92797 1274 aaKnown RBP18.36■□□□□ 0.53
SNX6-202ENST00000396526 ECM29Q5VYK3 1845 aa18.36■□□□□ 0.53
SNX6-202ENST00000396526 TTLL1O95922 423 aa18.36■□□□□ 0.53
SNX6-202ENST00000396526 SERPINC1P01008 464 aa18.36■□□□□ 0.53
SNX6-202ENST00000396526 CT47A1Q5JQC4 288 aaPredicted RBP18.36■□□□□ 0.53
SNX6-202ENST00000396526 CDC42EP5Q6NZY7 148 aa18.36■□□□□ 0.53
SNX6-202ENST00000396526 RASSF8Q8NHQ8 419 aa18.36■□□□□ 0.53
SNX6-202ENST00000396526 VAT1LQ9HCJ6 419 aa18.36■□□□□ 0.53
SNX6-202ENST00000396526 LONP1P36776 959 aaKnown RBP18.36■□□□□ 0.53
SNX6-202ENST00000396526 WWC2Q6AWC2 1192 aa18.36■□□□□ 0.53
SNX6-202ENST00000396526 USP17L2Q6R6M4 530 aa18.36■□□□□ 0.53
SNX6-202ENST00000396526 KIAA1524Q8TCG1 905 aa18.36■□□□□ 0.53
SNX6-202ENST00000396526 ZNF219Q9P2Y4 722 aaPredicted RBP18.36■□□□□ 0.53
SNX6-202ENST00000396526 R3HCC1Q9Y3T6 440 aaKnown RBP18.36■□□□□ 0.53
SNX6-202ENST00000396526 LAD1O00515 517 aa18.35■□□□□ 0.53
SNX6-202ENST00000396526 MPHOSPH10O00566 681 aaKnown RBP18.35■□□□□ 0.53
SNX6-202ENST00000396526 SF3B2Q13435 895 aaKnown RBP18.35■□□□□ 0.53
SNX6-202ENST00000396526 GRIPAP1Q4V328 841 aa18.35■□□□□ 0.53
SNX6-202ENST00000396526 DTHD1Q6ZMT9 781 aa18.35■□□□□ 0.53
SNX6-202ENST00000396526 ZDHHC15Q96MV8 337 aa18.35■□□□□ 0.53
SNX6-202ENST00000396526 CDK11BP21127 795 aaKnown RBP18.35■□□□□ 0.53
SNX6-202ENST00000396526 LMOD1P29536 600 aaPredicted RBP18.35■□□□□ 0.53
SNX6-202ENST00000396526 GABPAQ06546 454 aa18.35■□□□□ 0.53
SNX6-202ENST00000396526 KIAA0825Q8IV33 1275 aa18.35■□□□□ 0.53
SNX6-202ENST00000396526 ZSCAN29Q8IWY8 852 aaPredicted RBP18.35■□□□□ 0.53
SNX6-202ENST00000396526 EPSTI1Q96J88 318 aa18.34■□□□□ 0.53
SNX6-202ENST00000396526 IFNKQ9P0W0 207 aa18.34■□□□□ 0.53
SNX6-202ENST00000396526 LRRC37AA6NMS7 1700 aa18.34■□□□□ 0.53
SNX6-202ENST00000396526 STXBP3O00186 592 aa18.34■□□□□ 0.53
SNX6-202ENST00000396526 TPM2P07951 284 aa18.34■□□□□ 0.53
SNX6-202ENST00000396526 MDM2Q00987 491 aaPredicted RBP18.34■□□□□ 0.53
SNX6-202ENST00000396526 MAN1B1Q9UKM7 699 aa18.34■□□□□ 0.53
SNX6-202ENST00000396526 SMCO2A6NFE2 343 aa18.34■□□□□ 0.53
SNX6-202ENST00000396526 ECE2O60344 883 aa18.34■□□□□ 0.53
SNX6-202ENST00000396526 NT5DC1Q5TFE4 455 aa18.34■□□□□ 0.53
SNX6-202ENST00000396526 PLIN4Q96Q06 1357 aa18.33■□□□□ 0.53
SNX6-202ENST00000396526 ACTN4O43707 911 aaKnown RBP18.33■□□□□ 0.53
SNX6-202ENST00000396526 CYTH3O43739 400 aa18.33■□□□□ 0.53
SNX6-202ENST00000396526 ATP2B2Q01814 1243 aa18.33■□□□□ 0.53
SNX6-202ENST00000396526 NONOQ15233 471 aaKnown RBP eCLIP18.33■□□□□ 0.53
SNX6-202ENST00000396526 ZMYND12Q9H0C1 365 aa18.33■□□□□ 0.53
SNX6-202ENST00000396526 NRBP1Q9UHY1 535 aa18.33■□□□□ 0.53
SNX6-202ENST00000396526 SNED1Q8TER0 1413 aa18.33■□□□□ 0.52
SNX6-202ENST00000396526 AFMP43652 599 aa18.33■□□□□ 0.52
SNX6-202ENST00000396526 FANCCQ00597 558 aa18.33■□□□□ 0.52
SNX6-202ENST00000396526 APOBEC3HQ6NTF7 200 aaKnown RBP18.33■□□□□ 0.52
SNX6-202ENST00000396526 GSDMAQ96QA5 445 aa18.33■□□□□ 0.52
SNX6-202ENST00000396526 MXD3Q9BW11 206 aa18.33■□□□□ 0.52
SNX6-202ENST00000396526 EHD4Q9H223 541 aa18.33■□□□□ 0.52
SNX6-202ENST00000396526 AKR1B1P15121 316 aa18.33■□□□□ 0.52
SNX6-202ENST00000396526 VEGFAP15692 232 aaPredicted RBP18.33■□□□□ 0.52
SNX6-202ENST00000396526 NOVP48745 357 aa18.33■□□□□ 0.52
SNX6-202ENST00000396526 GPATCH4Q5T3I0 446 aaKnown RBP18.33■□□□□ 0.52
SNX6-202ENST00000396526 USP49Q70CQ1 688 aa18.33■□□□□ 0.52
SNX6-202ENST00000396526 SPTLC3Q9NUV7 552 aa18.33■□□□□ 0.52
SNX6-202ENST00000396526 UBA7P41226 1012 aa18.32■□□□□ 0.52
SNX6-202ENST00000396526 UBASH3AP57075 661 aa18.32■□□□□ 0.52
SNX6-202ENST00000396526 FOXP4Q8IVH2 680 aaPredicted RBP18.32■□□□□ 0.52
SNX6-202ENST00000396526 KCNF1Q9H3M0 494 aa18.32■□□□□ 0.52
SNX6-202ENST00000396526 DDX4Q9NQI0 724 aaKnown RBP18.32■□□□□ 0.52
SNX6-202ENST00000396526 PI4KBQ9UBF8 816 aa18.32■□□□□ 0.52
SNX6-202ENST00000396526 PCDHA6Q9UN73 950 aa18.32■□□□□ 0.52
SNX6-202ENST00000396526 PCDHA8Q9Y5H6 950 aa18.32■□□□□ 0.52
SNX6-202ENST00000396526 PDHBP11177 359 aa18.32■□□□□ 0.52
SNX6-202ENST00000396526 CFAP100Q494V2 611 aa18.32■□□□□ 0.52
SNX6-202ENST00000396526 CCDC150Q8NCX0 1101 aa18.32■□□□□ 0.52
SNX6-202ENST00000396526 XPO4Q9C0E2 1151 aaKnown RBP18.32■□□□□ 0.52
SNX6-202ENST00000396526 USP17L5A8MUK1 530 aa18.31■□□□□ 0.52
SNX6-202ENST00000396526 ERCC5P28715 1186 aaPredicted RBP18.31■□□□□ 0.52
SNX6-202ENST00000396526 FOXN1O15353 648 aa18.31■□□□□ 0.52
SNX6-202ENST00000396526 SARSP49591 514 aaKnown RBP18.31■□□□□ 0.52
SNX6-202ENST00000396526 NCAPHQ15003 741 aa18.31■□□□□ 0.52
SNX6-202ENST00000396526 INF2Q27J81 1249 aa18.31■□□□□ 0.52
SNX6-202ENST00000396526 RASGRP4Q8TDF6 673 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 2354 ms