RNA–Protein interactions for RNA: ENST00000396222.6

LDHA-204, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 1,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-204ENST00000396222 ATRNL1Q5VV63 1379 aa8.74□□□□□ -1.01
LDHA-204ENST00000396222 MPHOSPH10O00566 681 aaKnown RBP8.73□□□□□ -1.01
LDHA-204ENST00000396222 PARP1P09874 1014 aaKnown RBP8.73□□□□□ -1.01
LDHA-204ENST00000396222 XRCC6P12956 609 aaKnown RBP eCLIP8.73□□□□□ -1.01
LDHA-204ENST00000396222 ZNF445P59923 1031 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 CXCL9Q07325 125 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 TCP10Q12799 353 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 CERKLQ49MI3 558 aaPredicted RBP8.73□□□□□ -1.01
LDHA-204ENST00000396222 TMTC3Q6ZXV5 915 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 FAM83AQ86UY5 434 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 JMYQ8N9B5 988 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 CCDC12Q8WUD4 166 aaPredicted RBP8.73□□□□□ -1.01
LDHA-204ENST00000396222 FAM151AQ8WW52 585 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 KANSL2Q9H9L4 492 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 SENP2Q9HC62 589 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 IL17RBQ9NRM6 502 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 FAM217BQ9NTX9 383 aaPredicted RBP8.73□□□□□ -1.01
LDHA-204ENST00000396222 MTMR4Q9NYA4 1195 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 SYNPO2Q9UMS6 1093 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 FER1L6Q2WGJ9 1857 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 BRCA1P38398 1863 aaKnown RBP8.73□□□□□ -1.01
LDHA-204ENST00000396222 hCG_1984214I3L0E3 225 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 NFKBIEO00221 500 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 GADD45BO75293 160 aaPredicted RBP8.73□□□□□ -1.01
LDHA-204ENST00000396222 CALML3P27482 149 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 MRE11P49959 708 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 NFIAQ12857 509 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 GRM4Q14833 912 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 ZSCAN23Q3MJ62 389 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 ASPRV1Q53RT3 343 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 KRT40Q6A162 431 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 RCSD1Q6JBY9 416 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 TMEM179Q6ZVK1 233 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 ZNF713Q8N859 430 aaPredicted RBP8.73□□□□□ -1.01
LDHA-204ENST00000396222 SLC44A5Q8NCS7 719 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 BANK1Q8NDB2 785 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 CCDC148Q8NFR7 591 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 KCNG4Q8TDN1 519 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 CSRNP1Q96S65 589 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 TMEM47Q9BQJ4 181 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 FOXP1Q9H334 677 aaPredicted RBP8.73□□□□□ -1.01
LDHA-204ENST00000396222 GRPEL1Q9HAV7 217 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 MYOZ2Q9NPC6 264 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 SH3GLB2Q9NR46 395 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 TMEM63CQ9P1W3 806 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 FAM198AQ9UFP1 575 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 SEC63Q9UGP8 760 aaKnown RBP8.73□□□□□ -1.01
LDHA-204ENST00000396222 CEP131Q9UPN4 1083 aa8.73□□□□□ -1.01
LDHA-204ENST00000396222 SCN9AQ15858 1988 aa8.72□□□□□ -1.01
LDHA-204ENST00000396222 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.72□□□□□ -1.01
LDHA-204ENST00000396222 FZD9O00144 591 aa8.72□□□□□ -1.01
LDHA-204ENST00000396222 NMT2O60551 498 aa8.72□□□□□ -1.01
LDHA-204ENST00000396222 GABBR2O75899 941 aa8.72□□□□□ -1.01
LDHA-204ENST00000396222 MMP1P03956 469 aa8.72□□□□□ -1.01
LDHA-204ENST00000396222 CD44P16070 742 aaKnown RBP8.72□□□□□ -1.01
LDHA-204ENST00000396222 LMNB1P20700 586 aa8.72□□□□□ -1.01
LDHA-204ENST00000396222 NOVP48745 357 aa8.72□□□□□ -1.01
LDHA-204ENST00000396222 SF3A1Q15459 793 aaKnown RBP8.72□□□□□ -1.01
LDHA-204ENST00000396222 GPATCH4Q5T3I0 446 aaKnown RBP8.72□□□□□ -1.01
LDHA-204ENST00000396222 GALNT17Q6IS24 598 aa8.72□□□□□ -1.01
LDHA-204ENST00000396222 TATDN1Q6P1N9 297 aa8.72□□□□□ -1.01
LDHA-204ENST00000396222 NBPF11Q86T75 865 aa8.72□□□□□ -1.01
LDHA-204ENST00000396222 METTL16Q86W50 562 aaKnown RBP8.72□□□□□ -1.01
LDHA-204ENST00000396222 CEP95Q96GE4 821 aa8.72□□□□□ -1.01
LDHA-204ENST00000396222 PRMT6Q96LA8 375 aaPredicted RBP8.72□□□□□ -1.01
LDHA-204ENST00000396222 ZNF70Q9UC06 446 aaPredicted RBP8.72□□□□□ -1.01
LDHA-204ENST00000396222 H7C1D1 291 aa8.71□□□□□ -1.01
LDHA-204ENST00000396222 SMIM22K7EJ46 135 aa8.71□□□□□ -1.01
LDHA-204ENST00000396222 YEATS4O95619 227 aa8.71□□□□□ -1.01
LDHA-204ENST00000396222 SCG2P13521 617 aa8.71□□□□□ -1.01
LDHA-204ENST00000396222 U2AF2P26368 475 aaKnown RBP eCLIP8.71□□□□□ -1.012e-8■■□□□ 13.2
LDHA-204ENST00000396222 RFC5P40937 340 aa8.71□□□□□ -1.01
LDHA-204ENST00000396222 FOSBP53539 338 aa8.71□□□□□ -1.01
LDHA-204ENST00000396222 ZNF280AP59817 542 aaPredicted RBP8.71□□□□□ -1.01
LDHA-204ENST00000396222 GUCY1B3Q02153 619 aa8.71□□□□□ -1.01
LDHA-204ENST00000396222 KIF23Q02241 960 aaPredicted RBP8.71□□□□□ -1.01
LDHA-204ENST00000396222 PTGDRQ13258 359 aa8.71□□□□□ -1.01
LDHA-204ENST00000396222 RILPL1Q5EBL4 403 aa8.71□□□□□ -1.01
LDHA-204ENST00000396222 NKX2-3Q8TAU0 364 aa8.71□□□□□ -1.01
LDHA-204ENST00000396222 SPZ1Q9BXG8 430 aa8.71□□□□□ -1.01
LDHA-204ENST00000396222 SH2D4AQ9H788 454 aa8.71□□□□□ -1.01
LDHA-204ENST00000396222 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.71□□□□□ -1.018e-8■□□□□ 11.2
LDHA-204ENST00000396222 VEZTQ9HBM0 779 aa8.71□□□□□ -1.01
LDHA-204ENST00000396222 NYAP2Q9P242 653 aa8.71□□□□□ -1.01
LDHA-204ENST00000396222 V9GY48 417 aaPredicted RBP8.71□□□□□ -1.01
LDHA-204ENST00000396222 ARFGEF1Q9Y6D6 1849 aa8.71□□□□□ -1.01
LDHA-204ENST00000396222 TCP10L2B9ZVM9 353 aa8.71□□□□□ -1.02
LDHA-204ENST00000396222 KLRF2D3W0D1 207 aa8.71□□□□□ -1.02
LDHA-204ENST00000396222 TBC1D12O60347 775 aa8.71□□□□□ -1.02
LDHA-204ENST00000396222 BMP15O95972 392 aa8.71□□□□□ -1.02
LDHA-204ENST00000396222 SHMT1P34896 483 aa8.71□□□□□ -1.02
LDHA-204ENST00000396222 CLCN1P35523 988 aa8.71□□□□□ -1.02
LDHA-204ENST00000396222 KRT2P35908 639 aa8.71□□□□□ -1.02
LDHA-204ENST00000396222 STK38Q15208 465 aa8.71□□□□□ -1.02
LDHA-204ENST00000396222 PFKFB3Q16875 520 aaPredicted RBP8.71□□□□□ -1.02
LDHA-204ENST00000396222 ABCB5Q2M3G0 1257 aa8.71□□□□□ -1.02
LDHA-204ENST00000396222 MYSM1Q5VVJ2 828 aa8.71□□□□□ -1.02
LDHA-204ENST00000396222 ARHGAP27Q6ZUM4 889 aa8.71□□□□□ -1.02
LDHA-204ENST00000396222 NOSTRINQ8IVI9 506 aa8.71□□□□□ -1.02
LDHA-204ENST00000396222 LEO1Q8WVC0 666 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms