RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 RRP12Q5JTH9 1297 aaKnown RBP9.79□□□□□ -0.84
BDNF-204ENST00000395980 SMYD4Q8IYR2 804 aaPredicted RBP9.79□□□□□ -0.84
BDNF-204ENST00000395980 NUP133Q8WUM0 1156 aa9.79□□□□□ -0.84
BDNF-204ENST00000395980 PPM1EQ8WY54 764 aa9.79□□□□□ -0.84
BDNF-204ENST00000395980 DLEC1Q9Y238 1755 aa9.79□□□□□ -0.84
BDNF-204ENST00000395980 EIF3CLB5ME19 914 aaKnown RBP9.79□□□□□ -0.84
BDNF-204ENST00000395980 CPP00450 1065 aa9.79□□□□□ -0.84
BDNF-204ENST00000395980 CALM1P0DP23 149 aa9.79□□□□□ -0.84
BDNF-204ENST00000395980 CALM2P0DP24 149 aa9.79□□□□□ -0.84
BDNF-204ENST00000395980 CALM3P0DP25 149 aa9.79□□□□□ -0.84
BDNF-204ENST00000395980 NCAPH2Q6IBW4 605 aa9.79□□□□□ -0.84
BDNF-204ENST00000395980 COG1Q8WTW3 980 aa9.79□□□□□ -0.84
BDNF-204ENST00000395980 NELFBQ8WX92 580 aa9.79□□□□□ -0.84
BDNF-204ENST00000395980 ESR2Q92731 530 aa9.79□□□□□ -0.84
BDNF-204ENST00000395980 SHISA4Q96DD7 197 aa9.79□□□□□ -0.84
BDNF-204ENST00000395980 EIF3CQ99613 913 aaKnown RBP9.79□□□□□ -0.84
BDNF-204ENST00000395980 SAR1BQ9Y6B6 198 aa9.79□□□□□ -0.84
BDNF-204ENST00000395980 SLC4A4Q9Y6R1 1079 aa9.79□□□□□ -0.84
BDNF-204ENST00000395980 LGALS16A8MUM7 142 aa9.79□□□□□ -0.84
BDNF-204ENST00000395980 IRS4O14654 1257 aaPredicted RBP9.79□□□□□ -0.84
BDNF-204ENST00000395980 SYF2O95926 243 aaKnown RBP9.79□□□□□ -0.84
BDNF-204ENST00000395980 WWC2Q6AWC2 1192 aa9.79□□□□□ -0.84
BDNF-204ENST00000395980 IQCEQ6IPM2 695 aa9.79□□□□□ -0.84
BDNF-204ENST00000395980 TOMM22Q9NS69 142 aa9.79□□□□□ -0.84
BDNF-204ENST00000395980 TAB2Q9NYJ8 693 aa9.79□□□□□ -0.84
BDNF-204ENST00000395980 SPATA31A3Q5VYP0 1347 aa9.78□□□□□ -0.84
BDNF-204ENST00000395980 ZC3H4Q9UPT8 1303 aaKnown RBP9.78□□□□□ -0.84
BDNF-204ENST00000395980 TOGARAM1Q9Y4F4 1720 aa9.78□□□□□ -0.84
BDNF-204ENST00000395980 FAM205CA6NFA0 338 aa9.78□□□□□ -0.84
BDNF-204ENST00000395980 SHOX2O60902 331 aaPredicted RBP9.78□□□□□ -0.84
BDNF-204ENST00000395980 ABL1P00519 1130 aa9.78□□□□□ -0.84
BDNF-204ENST00000395980 EEF1GP26641 437 aaKnown RBP9.78□□□□□ -0.84
BDNF-204ENST00000395980 PPARAQ07869 468 aa9.78□□□□□ -0.84
BDNF-204ENST00000395980 RASGRF1Q13972 1273 aa9.78□□□□□ -0.84
BDNF-204ENST00000395980 TTC31Q49AM3 519 aaPredicted RBP9.78□□□□□ -0.84
BDNF-204ENST00000395980 ZKSCAN3Q9BRR0 538 aa9.78□□□□□ -0.84
BDNF-204ENST00000395980 VPS16Q9H269 839 aa9.78□□□□□ -0.84
BDNF-204ENST00000395980 VPS54Q9P1Q0 977 aa9.78□□□□□ -0.84
BDNF-204ENST00000395980 CAPN11Q9UMQ6 739 aa9.78□□□□□ -0.84
BDNF-204ENST00000395980 LUC7L2Q9Y383 392 aaKnown RBP9.78□□□□□ -0.84
BDNF-204ENST00000395980 RNF225M0QZC1 329 aaPredicted RBP9.78□□□□□ -0.84
BDNF-204ENST00000395980 STARD3NLO95772 234 aa9.78□□□□□ -0.84
BDNF-204ENST00000395980 TFRCP02786 760 aaKnown RBP9.78□□□□□ -0.84
BDNF-204ENST00000395980 PCP11498 1178 aaKnown RBP9.78□□□□□ -0.84
BDNF-204ENST00000395980 CASP1P29466 404 aa9.78□□□□□ -0.84
BDNF-204ENST00000395980 MEA1Q16626 185 aa9.78□□□□□ -0.84
BDNF-204ENST00000395980 TSR1Q2NL82 804 aaKnown RBP9.78□□□□□ -0.84
BDNF-204ENST00000395980 EFCAB13Q8IY85 973 aa9.78□□□□□ -0.84
BDNF-204ENST00000395980 LCORLQ8N3X6 602 aa9.78□□□□□ -0.84
BDNF-204ENST00000395980 TNKSO95271 1327 aa9.78□□□□□ -0.84
BDNF-204ENST00000395980 RREB1Q92766 1687 aa9.78□□□□□ -0.84
BDNF-204ENST00000395980 ATF3P18847 181 aa9.78□□□□□ -0.84
BDNF-204ENST00000395980 UBXN1Q04323 297 aa9.78□□□□□ -0.84
BDNF-204ENST00000395980 EARS2Q5JPH6 523 aaKnown RBP9.78□□□□□ -0.84
BDNF-204ENST00000395980 ARL6IP4Q66PJ3 421 aaKnown RBP9.78□□□□□ -0.84
BDNF-204ENST00000395980 CCDC82Q8N4S0 544 aa9.78□□□□□ -0.84
BDNF-204ENST00000395980 NOC3LQ8WTT2 800 aaKnown RBP9.78□□□□□ -0.84
BDNF-204ENST00000395980 GUCA1BQ9UMX6 200 aa9.78□□□□□ -0.84
BDNF-204ENST00000395980 PDS5AQ29RF7 1337 aaKnown RBP9.78□□□□□ -0.84
BDNF-204ENST00000395980 KRT86O43790 486 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 DDAH1O94760 285 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 ITIH3Q06033 890 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 STIM1Q13586 685 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 CMTR1Q8N1G2 835 aaKnown RBP9.77□□□□□ -0.85
BDNF-204ENST00000395980 MB21D1Q8N884 522 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 RETREG2Q8NC44 543 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 CABLES1Q8TDN4 633 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 THAP9Q9H5L6 903 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 DUOX1Q9NRD9 1551 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 PRKAB2O43741 272 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 RPN1P04843 607 aaKnown RBP9.77□□□□□ -0.85
BDNF-204ENST00000395980 MYL1P05976 194 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 IL2RBP14784 551 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 CDC25AP30304 524 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 CYLC1P35663 651 aaPredicted RBP9.77□□□□□ -0.85
BDNF-204ENST00000395980 PTGDRQ13258 359 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 NPY5RQ15761 445 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 DNAJC21Q5F1R6 531 aaKnown RBP9.77□□□□□ -0.85
BDNF-204ENST00000395980 FOXR1Q6PIV2 292 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 TMED8Q6PL24 325 aaPredicted RBP9.77□□□□□ -0.85
BDNF-204ENST00000395980 CATIPQ7Z7H3 387 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 ZNF507Q8TCN5 953 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 CHP1Q99653 195 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 NUP58Q9BVL2 599 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 SOS2Q07890 1332 aaPredicted RBP9.77□□□□□ -0.85
BDNF-204ENST00000395980 TTC26A0AVF1 554 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 PARP1P09874 1014 aaKnown RBP9.77□□□□□ -0.85
BDNF-204ENST00000395980 EIF5P55010 431 aaKnown RBP9.77□□□□□ -0.85
BDNF-204ENST00000395980 HERVK_113P62684 666 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 KCNB1Q14721 858 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 CCDC170Q8IYT3 715 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 FNBP4Q8N3X1 1017 aaPredicted RBP9.77□□□□□ -0.85
BDNF-204ENST00000395980 SMARCC1Q92922 1105 aaPredicted RBP9.77□□□□□ -0.85
BDNF-204ENST00000395980 CRACR2AQ9BSW2 395 aa9.77□□□□□ -0.85
BDNF-204ENST00000395980 COL5A2P05997 1499 aaPredicted RBP9.76□□□□□ -0.85
BDNF-204ENST00000395980 LONP1P36776 959 aaKnown RBP9.76□□□□□ -0.85
BDNF-204ENST00000395980 ZNF174Q15697 407 aa9.76□□□□□ -0.85
BDNF-204ENST00000395980 CCDC122Q5T0U0 273 aa9.76□□□□□ -0.85
BDNF-204ENST00000395980 ICE2Q659A1 982 aa9.76□□□□□ -0.85
BDNF-204ENST00000395980 CCDC70Q6NSX1 233 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms