RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 LRP2BPQ9P2M1 347 aa16.11■□□□□ 0.17
CLIP2-203ENST00000395060 SAR1BQ9Y6B6 198 aa16.11■□□□□ 0.17
CLIP2-203ENST00000395060 TNKSO95271 1327 aa16.1■□□□□ 0.17
CLIP2-203ENST00000395060 SOS2Q07890 1332 aaPredicted RBP16.1■□□□□ 0.17
CLIP2-203ENST00000395060 COL18A1P39060 1754 aa16.1■□□□□ 0.17
CLIP2-203ENST00000395060 RCCD1A6NED2 376 aa16.1■□□□□ 0.17
CLIP2-203ENST00000395060 PMS1P54277 932 aaKnown RBP16.1■□□□□ 0.17
CLIP2-203ENST00000395060 PAK1Q13153 545 aa16.1■□□□□ 0.17
CLIP2-203ENST00000395060 TTF1Q15361 905 aaPredicted RBP16.1■□□□□ 0.17
CLIP2-203ENST00000395060 TSR1Q2NL82 804 aaKnown RBP16.1■□□□□ 0.17
CLIP2-203ENST00000395060 KIF6Q6ZMV9 814 aa16.1■□□□□ 0.17
CLIP2-203ENST00000395060 KRT26Q7Z3Y9 468 aa16.1■□□□□ 0.17
CLIP2-203ENST00000395060 JAKMIP2Q96AA8 810 aa16.1■□□□□ 0.17
CLIP2-203ENST00000395060 KAT14Q9H8E8 782 aa16.1■□□□□ 0.17
CLIP2-203ENST00000395060 AGPAT5Q9NUQ2 364 aa16.1■□□□□ 0.17
CLIP2-203ENST00000395060 MYH8P13535 1937 aa16.1■□□□□ 0.17
CLIP2-203ENST00000395060 DCCP43146 1447 aa16.1■□□□□ 0.17
CLIP2-203ENST00000395060 PDE2AO00408 941 aaPredicted RBP16.1■□□□□ 0.17
CLIP2-203ENST00000395060 LIFRP42702 1097 aa16.1■□□□□ 0.17
CLIP2-203ENST00000395060 EIF5P55010 431 aaKnown RBP16.1■□□□□ 0.17
CLIP2-203ENST00000395060 ANKRD13CQ8N6S4 541 aa16.1■□□□□ 0.17
CLIP2-203ENST00000395060 SPATA5Q8NB90 893 aa16.1■□□□□ 0.17
CLIP2-203ENST00000395060 MTRQ99707 1265 aa16.1■□□□□ 0.17
CLIP2-203ENST00000395060 HPCAL4Q9UM19 191 aa16.1■□□□□ 0.17
CLIP2-203ENST00000395060 IRS4O14654 1257 aaPredicted RBP16.1■□□□□ 0.17
CLIP2-203ENST00000395060 NMT2O60551 498 aa16.1■□□□□ 0.17
CLIP2-203ENST00000395060 KRT2P35908 639 aa16.1■□□□□ 0.17
CLIP2-203ENST00000395060 PRCPP42785 496 aa16.1■□□□□ 0.17
CLIP2-203ENST00000395060 TCP11X2Q5H9J9 407 aa16.1■□□□□ 0.17
CLIP2-203ENST00000395060 ICE2Q659A1 982 aa16.1■□□□□ 0.17
CLIP2-203ENST00000395060 ANKRD20A12PQ8NF67 263 aa16.1■□□□□ 0.17
CLIP2-203ENST00000395060 WTIPA6NIX2 430 aaPredicted RBP16.09■□□□□ 0.17
CLIP2-203ENST00000395060 B4DLN1 442 aa16.09■□□□□ 0.17
CLIP2-203ENST00000395060 MAP3K12Q12852 859 aa16.09■□□□□ 0.17
CLIP2-203ENST00000395060 UBE3CQ15386 1083 aa16.09■□□□□ 0.17
CLIP2-203ENST00000395060 KCTD16Q68DU8 428 aa16.09■□□□□ 0.17
CLIP2-203ENST00000395060 SND1Q7KZF4 910 aaKnown RBP eCLIP16.09■□□□□ 0.17
CLIP2-203ENST00000395060 LUC7L2Q9Y383 392 aaKnown RBP16.09■□□□□ 0.17
CLIP2-203ENST00000395060 TCRBV5S4A2TA0A5A2 114 aa16.09■□□□□ 0.17
CLIP2-203ENST00000395060 PDE8BO95263 885 aa16.09■□□□□ 0.17
CLIP2-203ENST00000395060 IDEP14735 1019 aa16.09■□□□□ 0.17
CLIP2-203ENST00000395060 USP14P54578 494 aa16.09■□□□□ 0.17
CLIP2-203ENST00000395060 AMPD2Q01433 879 aa16.09■□□□□ 0.17
CLIP2-203ENST00000395060 TTC38Q5R3I4 469 aa16.09■□□□□ 0.17
CLIP2-203ENST00000395060 FBXW10Q5XX13 1052 aa16.09■□□□□ 0.17
CLIP2-203ENST00000395060 SPATA20Q8TB22 786 aa16.09■□□□□ 0.17
CLIP2-203ENST00000395060 SELENOOQ9BVL4 669 aa16.09■□□□□ 0.17
CLIP2-203ENST00000395060 ATP1A2P50993 1020 aa16.08■□□□□ 0.17
CLIP2-203ENST00000395060 HERVK_113P62684 666 aa16.08■□□□□ 0.17
CLIP2-203ENST00000395060 ISCA1Q9BUE6 129 aa16.08■□□□□ 0.17
CLIP2-203ENST00000395060 COL5A2P05997 1499 aaPredicted RBP16.08■□□□□ 0.17
CLIP2-203ENST00000395060 WDR19Q8NEZ3 1342 aa16.08■□□□□ 0.16
CLIP2-203ENST00000395060 LOC102724159A0A0B4J2E5 919 aa16.08■□□□□ 0.16
CLIP2-203ENST00000395060 GOLGA6CA6NDK9 693 aa16.08■□□□□ 0.16
CLIP2-203ENST00000395060 NKRFO15226 690 aaKnown RBP eCLIP16.08■□□□□ 0.16
CLIP2-203ENST00000395060 GOLGA6DP0CG33 693 aa16.08■□□□□ 0.16
CLIP2-203ENST00000395060 TRIM21P19474 475 aaKnown RBP16.08■□□□□ 0.16
CLIP2-203ENST00000395060 PWP2Q15269 919 aaKnown RBP16.08■□□□□ 0.16
CLIP2-203ENST00000395060 TRIM47Q96LD4 638 aa16.08■□□□□ 0.16
CLIP2-203ENST00000395060 KRT23Q9C075 422 aa16.08■□□□□ 0.16
CLIP2-203ENST00000395060 GOLGA6AQ9NYA3 693 aa16.08■□□□□ 0.16
CLIP2-203ENST00000395060 ARFGEF2Q9Y6D5 1785 aa16.08■□□□□ 0.16
CLIP2-203ENST00000395060 PARP1P09874 1014 aaKnown RBP16.08■□□□□ 0.16
CLIP2-203ENST00000395060 EFCC1Q9HA90 598 aa16.08■□□□□ 0.16
CLIP2-203ENST00000395060 AATFQ9NY61 560 aaKnown RBP eCLIP16.08■□□□□ 0.16
CLIP2-203ENST00000395060 PLEKP08567 350 aaPredicted RBP16.07■□□□□ 0.16
CLIP2-203ENST00000395060 RNASE9P60153 205 aaKnown RBP16.07■□□□□ 0.16
CLIP2-203ENST00000395060 ZBTB38Q8NAP3 1195 aaPredicted RBP16.07■□□□□ 0.16
CLIP2-203ENST00000395060 GSDMAQ96QA5 445 aa16.07■□□□□ 0.16
CLIP2-203ENST00000395060 NACAP1Q9BZK3 213 aa16.07■□□□□ 0.16
CLIP2-203ENST00000395060 FAM107BQ9H098 131 aa16.07■□□□□ 0.16
CLIP2-203ENST00000395060 ZEB2O60315 1214 aa16.07■□□□□ 0.16
CLIP2-203ENST00000395060 CORO7P57737 925 aa16.07■□□□□ 0.16
CLIP2-203ENST00000395060 IQUBQ8NA54 791 aa16.07■□□□□ 0.16
CLIP2-203ENST00000395060 ZNF579Q8NAF0 562 aaKnown RBP16.07■□□□□ 0.16
CLIP2-203ENST00000395060 BCAS4Q8TDM0 211 aa16.07■□□□□ 0.16
CLIP2-203ENST00000395060 DNAJC5Q9H3Z4 198 aa16.07■□□□□ 0.16
CLIP2-203ENST00000395060 GOLGA6BA6NDN3 693 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 PPFIA4O75335 1185 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 XBP1P17861 261 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 NLRP5P59047 1200 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 ATP2B2Q01814 1243 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 TRAPPC11Q7Z392 1133 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 DHX37Q8IY37 1157 aaKnown RBP16.06■□□□□ 0.16
CLIP2-203ENST00000395060 SH2D3CQ8N5H7 860 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 OR8K1Q8NGG5 319 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 FAM76AQ8TAV0 307 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 MED4Q9NPJ6 270 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 RIC1Q4ADV7 1423 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 C4AP0C0L4 1744 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 C4BP0C0L5 1744 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 CCDC196A0A1B0GTZ2 297 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 FAM170AA1A519 330 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 ADAMTS2O95450 1211 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 CYP7A1P22680 504 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 CTSWP56202 376 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 PKN1Q16512 942 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 CCDC96Q2M329 555 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 FAM47AQ5JRC9 791 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 ADGRA1Q86SQ6 560 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms