RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 MMP1P03956 469 aa28.36■■■□□ 2.13
CTF1-202ENST00000395019 GSE1Q14687 1217 aa28.36■■■□□ 2.13
CTF1-202ENST00000395019 SHROOM1Q2M3G4 852 aaPredicted RBP28.36■■■□□ 2.13
CTF1-202ENST00000395019 LEO1Q8WVC0 666 aaPredicted RBP28.36■■■□□ 2.13
CTF1-202ENST00000395019 SPATA32Q96LK8 384 aa28.36■■■□□ 2.13
CTF1-202ENST00000395019 MYH6P13533 1939 aa28.35■■■□□ 2.13
CTF1-202ENST00000395019 XBP1P17861 261 aa28.35■■■□□ 2.13
CTF1-202ENST00000395019 MAP3K10Q02779 954 aa28.35■■■□□ 2.13
CTF1-202ENST00000395019 ZNF408Q9H9D4 720 aa28.35■■■□□ 2.13
CTF1-202ENST00000395019 TOMM70O94826 608 aa28.34■■■□□ 2.13
CTF1-202ENST00000395019 U2AF2P26368 475 aaKnown RBP eCLIP28.34■■■□□ 2.13
CTF1-202ENST00000395019 MOB2Q70IA6 237 aa28.34■■■□□ 2.13
CTF1-202ENST00000395019 GZF1Q9H116 711 aaPredicted RBP28.34■■■□□ 2.13
CTF1-202ENST00000395019 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.34■■■□□ 2.13
CTF1-202ENST00000395019 CLIP2Q9UDT6 1046 aa28.34■■■□□ 2.13
CTF1-202ENST00000395019 PARP1P09874 1014 aaKnown RBP28.33■■■□□ 2.13
CTF1-202ENST00000395019 SAFBQ15424 915 aaKnown RBP eCLIP28.33■■■□□ 2.13
CTF1-202ENST00000395019 MYSM1Q5VVJ2 828 aa28.33■■■□□ 2.13
CTF1-202ENST00000395019 SUPT20HL1Q3ZLR7 823 aa28.32■■■□□ 2.12
CTF1-202ENST00000395019 TMEM179Q6ZVK1 233 aa28.32■■■□□ 2.12
CTF1-202ENST00000395019 USP28Q96RU2 1077 aa28.32■■■□□ 2.12
CTF1-202ENST00000395019 KANSL2Q9H9L4 492 aa28.32■■■□□ 2.12
CTF1-202ENST00000395019 KCNJ14Q9UNX9 436 aa28.32■■■□□ 2.12
CTF1-202ENST00000395019 hCG_1642624A0A1W2PR95 340 aa28.32■■■□□ 2.12
CTF1-202ENST00000395019 TBC1D12O60347 775 aa28.32■■■□□ 2.12
CTF1-202ENST00000395019 SMARCA1P28370 1054 aa28.32■■■□□ 2.12
CTF1-202ENST00000395019 JAG1P78504 1218 aa28.32■■■□□ 2.12
CTF1-202ENST00000395019 PFKFB3Q16875 520 aaPredicted RBP28.32■■■□□ 2.12
CTF1-202ENST00000395019 CLEC10AQ8IUN9 316 aa28.32■■■□□ 2.12
CTF1-202ENST00000395019 LRRC47Q8N1G4 583 aaKnown RBP28.32■■■□□ 2.12
CTF1-202ENST00000395019 SMC1BQ8NDV3 1235 aa28.32■■■□□ 2.12
CTF1-202ENST00000395019 RBM46Q8TBY0 533 aaKnown RBP28.32■■■□□ 2.12
CTF1-202ENST00000395019 RCOR1Q9UKL0 485 aa28.32■■■□□ 2.12
CTF1-202ENST00000395019 MTMR7Q9Y216 660 aa28.32■■■□□ 2.12
CTF1-202ENST00000395019 DOCK1Q14185 1865 aa28.31■■■□□ 2.12
CTF1-202ENST00000395019 PHF20L1A8MW92 1017 aa28.31■■■□□ 2.12
CTF1-202ENST00000395019 SNHG28P0DPA3 235 aa28.31■■■□□ 2.12
CTF1-202ENST00000395019 PDHBP11177 359 aa28.31■■■□□ 2.12
CTF1-202ENST00000395019 SCG2P13521 617 aa28.31■■■□□ 2.12
CTF1-202ENST00000395019 GNL2Q13823 731 aaKnown RBP28.31■■■□□ 2.12
CTF1-202ENST00000395019 ABCB5Q2M3G0 1257 aa28.31■■■□□ 2.12
CTF1-202ENST00000395019 SPZ1Q9BXG8 430 aa28.31■■■□□ 2.12
CTF1-202ENST00000395019 FOXP1Q9H334 677 aaPredicted RBP28.31■■■□□ 2.12
CTF1-202ENST00000395019 NYAP2Q9P242 653 aa28.31■■■□□ 2.12
CTF1-202ENST00000395019 PASKQ96RG2 1323 aa28.31■■■□□ 2.12
CTF1-202ENST00000395019 KLRF2D3W0D1 207 aa28.3■■■□□ 2.12
CTF1-202ENST00000395019 USP2O75604 605 aaPredicted RBP28.3■■■□□ 2.12
CTF1-202ENST00000395019 SLC35G1Q2M3R5 365 aa28.3■■■□□ 2.12
CTF1-202ENST00000395019 CAVIN1Q6NZI2 390 aaKnown RBP28.3■■■□□ 2.12
CTF1-202ENST00000395019 USP17L2Q6R6M4 530 aa28.3■■■□□ 2.12
CTF1-202ENST00000395019 DIS3L2Q8IYB7 885 aaKnown RBP28.3■■■□□ 2.12
CTF1-202ENST00000395019 MKL1Q969V6 931 aa28.3■■■□□ 2.12
CTF1-202ENST00000395019 SHISA4Q96DD7 197 aa28.3■■■□□ 2.12
CTF1-202ENST00000395019 RTEL1Q9NZ71 1219 aa28.3■■■□□ 2.12
CTF1-202ENST00000395019 VPS54Q9P1Q0 977 aa28.3■■■□□ 2.12
CTF1-202ENST00000395019 USP17L5A8MUK1 530 aa28.29■■■□□ 2.12
CTF1-202ENST00000395019 CYTH3O43739 400 aa28.29■■■□□ 2.12
CTF1-202ENST00000395019 CST9Q5W186 159 aa28.29■■■□□ 2.12
CTF1-202ENST00000395019 PHF20Q9BVI0 1012 aa28.29■■■□□ 2.12
CTF1-202ENST00000395019 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.29■■■□□ 2.12
CTF1-202ENST00000395019 CELF2O95319 508 aaKnown RBP28.29■■■□□ 2.12
CTF1-202ENST00000395019 GDF11O95390 407 aa28.29■■■□□ 2.12
CTF1-202ENST00000395019 INPP5BP32019 993 aa28.29■■■□□ 2.12
CTF1-202ENST00000395019 ASPRV1Q53RT3 343 aa28.29■■■□□ 2.12
CTF1-202ENST00000395019 BTBD18B2RXH4 712 aa28.28■■■□□ 2.12
CTF1-202ENST00000395019 GOLGA8HP0CJ92 632 aa28.28■■■□□ 2.12
CTF1-202ENST00000395019 DCAF15Q66K64 600 aa28.28■■■□□ 2.12
CTF1-202ENST00000395019 RASGRP2Q7LDG7 609 aa28.28■■■□□ 2.12
CTF1-202ENST00000395019 ZNF341Q9BYN7 854 aa28.28■■■□□ 2.12
CTF1-202ENST00000395019 FTOQ9C0B1 505 aaKnown RBP eCLIP28.28■■■□□ 2.12
CTF1-202ENST00000395019 POLR3EQ9NVU0 708 aa28.28■■■□□ 2.12
CTF1-202ENST00000395019 CEBPZQ03701 1054 aaKnown RBP28.27■■■□□ 2.12
CTF1-202ENST00000395019 SEPT2Q15019 361 aa28.27■■■□□ 2.12
CTF1-202ENST00000395019 NOSTRINQ8IVI9 506 aa28.27■■■□□ 2.12
CTF1-202ENST00000395019 KLRG1Q96E93 195 aa28.27■■■□□ 2.12
CTF1-202ENST00000395019 CABP5Q9NP86 173 aa28.27■■■□□ 2.12
CTF1-202ENST00000395019 PHIPQ8WWQ0 1821 aa28.26■■■□□ 2.11
CTF1-202ENST00000395019 EEF2P13639 858 aaKnown RBP28.26■■■□□ 2.11
CTF1-202ENST00000395019 HOOK2Q96ED9 719 aa28.26■■■□□ 2.11
CTF1-202ENST00000395019 WRNIP1Q96S55 665 aa28.26■■■□□ 2.11
CTF1-202ENST00000395019 SH3GLB2Q9NR46 395 aa28.26■■■□□ 2.11
CTF1-202ENST00000395019 ZNF112Q9UJU3 913 aa28.26■■■□□ 2.11
CTF1-202ENST00000395019 YEATS4O95619 227 aa28.25■■■□□ 2.11
CTF1-202ENST00000395019 NF2P35240 595 aa28.25■■■□□ 2.11
CTF1-202ENST00000395019 NASPP49321 788 aaPredicted RBP28.25■■■□□ 2.11
CTF1-202ENST00000395019 ATP2B2Q01814 1243 aa28.25■■■□□ 2.11
CTF1-202ENST00000395019 ICA1Q05084 483 aa28.25■■■□□ 2.11
CTF1-202ENST00000395019 SIAH1Q8IUQ4 282 aa28.25■■■□□ 2.11
CTF1-202ENST00000395019 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.25■■■□□ 2.11
CTF1-202ENST00000395019 ZKSCAN4Q969J2 545 aaPredicted RBP28.25■■■□□ 2.11
CTF1-202ENST00000395019 TMEM63CQ9P1W3 806 aa28.25■■■□□ 2.11
CTF1-202ENST00000395019 GH2P01242 217 aa28.25■■■□□ 2.11
CTF1-202ENST00000395019 TTLL12Q14166 644 aaPredicted RBP28.25■■■□□ 2.11
CTF1-202ENST00000395019 PIBF1Q8WXW3 757 aa28.25■■■□□ 2.11
CTF1-202ENST00000395019 SYAP1Q96A49 352 aaPredicted RBP28.25■■■□□ 2.11
CTF1-202ENST00000395019 PGBD1Q96JS3 809 aa28.25■■■□□ 2.11
CTF1-202ENST00000395019 MYH4Q9Y623 1939 aa28.24■■■□□ 2.11
CTF1-202ENST00000395019 KRT2P35908 639 aa28.24■■■□□ 2.11
CTF1-202ENST00000395019 ZNF543Q08ER8 600 aa28.24■■■□□ 2.11
CTF1-202ENST00000395019 ANO1Q5XXA6 986 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms