RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 A0A1W2PQ45 241 aaPredicted RBP19.18■□□□□ 0.66
SNCA-205ENST00000394991 A0A1W2PQY0 241 aa19.18■□□□□ 0.66
SNCA-205ENST00000394991 PQBP1O60828 265 aaKnown RBP19.18■□□□□ 0.66
SNCA-205ENST00000394991 PGK2P07205 417 aa19.18■□□□□ 0.66
SNCA-205ENST00000394991 RARBP10826 455 aa19.18■□□□□ 0.66
SNCA-205ENST00000394991 GRIN2CQ14957 1233 aa19.18■□□□□ 0.66
SNCA-205ENST00000394991 SAMD1Q6SPF0 538 aaPredicted RBP19.18■□□□□ 0.66
SNCA-205ENST00000394991 AACSQ86V21 672 aa19.18■□□□□ 0.66
SNCA-205ENST00000394991 LCORLQ8N3X6 602 aa19.18■□□□□ 0.66
SNCA-205ENST00000394991 DYNLL2Q96FJ2 89 aa19.18■□□□□ 0.66
SNCA-205ENST00000394991 VCPKMTQ9H867 229 aa19.18■□□□□ 0.66
SNCA-205ENST00000394991 NRBP1Q9UHY1 535 aa19.18■□□□□ 0.66
SNCA-205ENST00000394991 TCRBV5S4A2TA0A5A2 114 aa19.17■□□□□ 0.66
SNCA-205ENST00000394991 SMIM22K7EJ46 135 aa19.17■□□□□ 0.66
SNCA-205ENST00000394991 ICA1Q05084 483 aa19.17■□□□□ 0.66
SNCA-205ENST00000394991 SLC9C2Q5TAH2 1124 aa19.17■□□□□ 0.66
SNCA-205ENST00000394991 MMP19Q99542 508 aa19.17■□□□□ 0.66
SNCA-205ENST00000394991 EXOC6BQ9Y2D4 811 aa19.17■□□□□ 0.66
SNCA-205ENST00000394991 NCOR1O75376 2440 aa19.17■□□□□ 0.66
SNCA-205ENST00000394991 GBF1Q92538 1859 aa19.17■□□□□ 0.66
SNCA-205ENST00000394991 ZNF532Q9HCE3 1301 aa19.17■□□□□ 0.66
SNCA-205ENST00000394991 GREB1LQ9C091 1923 aaPredicted RBP19.17■□□□□ 0.66
SNCA-205ENST00000394991 WDR46O15213 610 aaKnown RBP19.16■□□□□ 0.66
SNCA-205ENST00000394991 ADAMTS4O75173 837 aa19.16■□□□□ 0.66
SNCA-205ENST00000394991 SLC25A27O95847 323 aa19.16■□□□□ 0.66
SNCA-205ENST00000394991 ZNF865P0CJ78 1059 aaPredicted RBP19.16■□□□□ 0.66
SNCA-205ENST00000394991 RLBP1P12271 317 aa19.16■□□□□ 0.66
SNCA-205ENST00000394991 RAG1P15918 1043 aa19.16■□□□□ 0.66
SNCA-205ENST00000394991 DNAJB2P25686 324 aa19.16■□□□□ 0.66
SNCA-205ENST00000394991 FPGSQ05932 587 aa19.16■□□□□ 0.66
SNCA-205ENST00000394991 ZNF792Q3KQV3 632 aa19.16■□□□□ 0.66
SNCA-205ENST00000394991 RNF180Q86T96 592 aa19.16■□□□□ 0.66
SNCA-205ENST00000394991 SYMPKQ92797 1274 aaKnown RBP19.16■□□□□ 0.66
SNCA-205ENST00000394991 TINF2Q9BSI4 451 aa19.16■□□□□ 0.66
SNCA-205ENST00000394991 ARHGEF10LQ9HCE6 1279 aa19.16■□□□□ 0.66
SNCA-205ENST00000394991 FBXO28Q9NVF7 368 aa19.16■□□□□ 0.66
SNCA-205ENST00000394991 SWAP70Q9UH65 585 aa19.16■□□□□ 0.66
SNCA-205ENST00000394991 ADAMTS5Q9UNA0 930 aa19.16■□□□□ 0.66
SNCA-205ENST00000394991 MUC3AQ02505 3323 aa19.16■□□□□ 0.66
SNCA-205ENST00000394991 CEP85Q6P2H3 762 aa19.15■□□□□ 0.66
SNCA-205ENST00000394991 RIOX2Q8IUF8 465 aa19.15■□□□□ 0.66
SNCA-205ENST00000394991 IL1RAPL2Q9NP60 686 aa19.15■□□□□ 0.66
SNCA-205ENST00000394991 TMEM39AQ9NV64 488 aa19.15■□□□□ 0.66
SNCA-205ENST00000394991 AKR1A1P14550 325 aa19.14■□□□□ 0.65
SNCA-205ENST00000394991 FAAP100Q0VG06 881 aa19.14■□□□□ 0.65
SNCA-205ENST00000394991 TTF1Q15361 905 aaPredicted RBP19.14■□□□□ 0.65
SNCA-205ENST00000394991 ANKRD33Q7Z3H0 272 aa19.14■□□□□ 0.65
SNCA-205ENST00000394991 ITPRIPQ8IWB1 547 aa19.14■□□□□ 0.65
SNCA-205ENST00000394991 SH2D4AQ9H788 454 aa19.14■□□□□ 0.65
SNCA-205ENST00000394991 ARMT1Q9H993 441 aa19.14■□□□□ 0.65
SNCA-205ENST00000394991 DIS3Q9Y2L1 958 aaKnown RBP19.14■□□□□ 0.65
SNCA-205ENST00000394991 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.13■□□□□ 0.65
SNCA-205ENST00000394991 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.13■□□□□ 0.65
SNCA-205ENST00000394991 PRKAB2O43741 272 aa19.13■□□□□ 0.65
SNCA-205ENST00000394991 SLFNL1Q499Z3 407 aa19.13■□□□□ 0.65
SNCA-205ENST00000394991 TJAP1Q5JTD0 557 aa19.13■□□□□ 0.65
SNCA-205ENST00000394991 REPS2Q8NFH8 660 aa19.13■□□□□ 0.65
SNCA-205ENST00000394991 ZNF214Q9UL59 606 aaPredicted RBP19.13■□□□□ 0.65
SNCA-205ENST00000394991 SYNRGQ9UMZ2 1314 aa19.13■□□□□ 0.65
SNCA-205ENST00000394991 CYP2D7A0A087X1C5 515 aa19.12■□□□□ 0.65
SNCA-205ENST00000394991 GOLIM4O00461 696 aa19.12■□□□□ 0.65
SNCA-205ENST00000394991 ACLYP53396 1101 aa19.12■□□□□ 0.65
SNCA-205ENST00000394991 KCTD2Q14681 263 aa19.12■□□□□ 0.65
SNCA-205ENST00000394991 ERC1Q8IUD2 1116 aa19.12■□□□□ 0.65
SNCA-205ENST00000394991 TOX2Q96NM4 488 aa19.12■□□□□ 0.65
SNCA-205ENST00000394991 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.12■□□□□ 0.65
SNCA-205ENST00000394991 ZNF576Q9H609 170 aa19.12■□□□□ 0.65
SNCA-205ENST00000394991 STARD7Q9NQZ5 370 aa19.12■□□□□ 0.65
SNCA-205ENST00000394991 TBX21Q9UL17 535 aa19.12■□□□□ 0.65
SNCA-205ENST00000394991 PPP1R9AQ9ULJ8 1098 aa19.12■□□□□ 0.65
SNCA-205ENST00000394991 MYH4Q9Y623 1939 aa19.12■□□□□ 0.65
SNCA-205ENST00000394991 MYADML2A6NDP7 307 aa19.11■□□□□ 0.65
SNCA-205ENST00000394991 VWA5AO00534 786 aa19.11■□□□□ 0.65
SNCA-205ENST00000394991 EEF2P13639 858 aaKnown RBP19.11■□□□□ 0.65
SNCA-205ENST00000394991 STAT3P40763 770 aa19.11■□□□□ 0.65
SNCA-205ENST00000394991 CDK8P49336 464 aa19.11■□□□□ 0.65
SNCA-205ENST00000394991 FTSJ3Q8IY81 847 aaKnown RBP19.11■□□□□ 0.65
SNCA-205ENST00000394991 KLHDC9Q8NEP7 349 aa19.11■□□□□ 0.65
SNCA-205ENST00000394991 TIFAQ96CG3 184 aa19.11■□□□□ 0.65
SNCA-205ENST00000394991 DNAJC2Q99543 621 aaKnown RBP19.11■□□□□ 0.65
SNCA-205ENST00000394991 TSEN34Q9BSV6 310 aaKnown RBP19.11■□□□□ 0.65
SNCA-205ENST00000394991 CHD9Q3L8U1 2897 aa19.1■□□□□ 0.65
SNCA-205ENST00000394991 MBD4O95243 580 aa19.1■□□□□ 0.65
SNCA-205ENST00000394991 TIMP1P01033 207 aa19.1■□□□□ 0.65
SNCA-205ENST00000394991 IRX5P78411 483 aaPredicted RBP19.1■□□□□ 0.65
SNCA-205ENST00000394991 FAM83BQ5T0W9 1011 aa19.1■□□□□ 0.65
SNCA-205ENST00000394991 C12orf60Q5U649 245 aa19.1■□□□□ 0.65
SNCA-205ENST00000394991 CCSAPQ6IQ19 270 aaPredicted RBP19.1■□□□□ 0.65
SNCA-205ENST00000394991 RHPN1Q8TCX5 695 aa19.1■□□□□ 0.65
SNCA-205ENST00000394991 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.1■□□□□ 0.65
SNCA-205ENST00000394991 CCDC17Q96LX7 622 aa19.1■□□□□ 0.65
SNCA-205ENST00000394991 DCDC2CA8MYV0 355 aa19.09■□□□□ 0.65
SNCA-205ENST00000394991 TNFRSF10AO00220 468 aa19.09■□□□□ 0.65
SNCA-205ENST00000394991 SNAI1O95863 264 aaPredicted RBP19.09■□□□□ 0.65
SNCA-205ENST00000394991 CHGBP05060 677 aa19.09■□□□□ 0.65
SNCA-205ENST00000394991 PBX2P40425 430 aa19.09■□□□□ 0.65
SNCA-205ENST00000394991 C16orf86Q6ZW13 317 aa19.09■□□□□ 0.65
SNCA-205ENST00000394991 C16orf59Q7L2K0 433 aa19.09■□□□□ 0.65
SNCA-205ENST00000394991 ATP8A2Q9NTI2 1148 aa19.09■□□□□ 0.65
SNCA-205ENST00000394991 CNPY2Q9Y2B0 182 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms