RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 TSGA10Q9BZW7 698 aa13.09□□□□□ -0.31
UBE2D3-209ENST00000394804 CENPHQ9H3R5 247 aa13.09□□□□□ -0.31
UBE2D3-209ENST00000394804 MACROD2A1Z1Q3 448 aa13.09□□□□□ -0.31
UBE2D3-209ENST00000394804 PRPF3O43395 683 aaKnown RBP13.09□□□□□ -0.31
UBE2D3-209ENST00000394804 RPN1P04843 607 aaKnown RBP13.09□□□□□ -0.31
UBE2D3-209ENST00000394804 ENOX2Q16206 610 aaKnown RBP13.09□□□□□ -0.31
UBE2D3-209ENST00000394804 ZSCAN26Q16670 478 aa13.09□□□□□ -0.31
UBE2D3-209ENST00000394804 LETM2Q2VYF4 491 aa13.09□□□□□ -0.31
UBE2D3-209ENST00000394804 BLIDQ8IZY5 108 aa13.09□□□□□ -0.31
UBE2D3-209ENST00000394804 ZNF512BQ96KM6 892 aaPredicted RBP13.09□□□□□ -0.31
UBE2D3-209ENST00000394804 SETDB2Q96T68 719 aa13.09□□□□□ -0.31
UBE2D3-209ENST00000394804 HAUS4Q9H6D7 363 aa13.09□□□□□ -0.31
UBE2D3-209ENST00000394804 MYO1AQ9UBC5 1043 aa13.09□□□□□ -0.31
UBE2D3-209ENST00000394804 SEMA3EO15041 775 aa13.09□□□□□ -0.31
UBE2D3-209ENST00000394804 SLF2Q8IX21 1173 aa13.09□□□□□ -0.31
UBE2D3-209ENST00000394804 FBXO2Q9UK22 296 aaPredicted RBP13.09□□□□□ -0.31
UBE2D3-209ENST00000394804 EPN1Q9Y6I3 576 aaPredicted RBP13.09□□□□□ -0.31
UBE2D3-209ENST00000394804 GSG1L2A8MUP6 293 aa13.08□□□□□ -0.32
UBE2D3-209ENST00000394804 SLIT3O75094 1523 aa13.08□□□□□ -0.32
UBE2D3-209ENST00000394804 MFAP3LO75121 409 aa13.08□□□□□ -0.32
UBE2D3-209ENST00000394804 ZNF772Q68DY9 489 aaPredicted RBP13.08□□□□□ -0.32
UBE2D3-209ENST00000394804 FNBP4Q8N3X1 1017 aaPredicted RBP13.08□□□□□ -0.32
UBE2D3-209ENST00000394804 TRPC5Q9UL62 973 aaPredicted RBP13.08□□□□□ -0.32
UBE2D3-209ENST00000394804 JAG2Q9Y219 1238 aa13.08□□□□□ -0.32
UBE2D3-209ENST00000394804 NFAT5O94916 1531 aa13.08□□□□□ -0.32
UBE2D3-209ENST00000394804 SNAP23O00161 211 aa13.08□□□□□ -0.32
UBE2D3-209ENST00000394804 LONP1P36776 959 aaKnown RBP13.08□□□□□ -0.32
UBE2D3-209ENST00000394804 NCAPHQ15003 741 aa13.08□□□□□ -0.32
UBE2D3-209ENST00000394804 PTPAQ15257 358 aa13.08□□□□□ -0.32
UBE2D3-209ENST00000394804 OXER1Q8TDS5 423 aa13.08□□□□□ -0.32
UBE2D3-209ENST00000394804 RRP36Q96EU6 259 aaKnown RBP13.08□□□□□ -0.32
UBE2D3-209ENST00000394804 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.08□□□□□ -0.32
UBE2D3-209ENST00000394804 NYXQ9GZU5 481 aa13.08□□□□□ -0.32
UBE2D3-209ENST00000394804 ARPP21Q9UBL0 812 aaPredicted RBP13.08□□□□□ -0.32
UBE2D3-209ENST00000394804 SAR1BQ9Y6B6 198 aa13.08□□□□□ -0.32
UBE2D3-209ENST00000394804 CAMTA1Q9Y6Y1 1673 aa13.08□□□□□ -0.32
UBE2D3-209ENST00000394804 LDHBP07195 334 aaKnown RBP13.08□□□□□ -0.32
UBE2D3-209ENST00000394804 GUCY1A2P33402 732 aa13.08□□□□□ -0.32
UBE2D3-209ENST00000394804 CC2D1AQ6P1N0 951 aaPredicted RBP13.08□□□□□ -0.32
UBE2D3-209ENST00000394804 HPSEQ9Y251 543 aa13.08□□□□□ -0.32
UBE2D3-209ENST00000394804 DNM2P50570 870 aa13.07□□□□□ -0.32
UBE2D3-209ENST00000394804 RPGRIP1Q96KN7 1286 aa13.07□□□□□ -0.32
UBE2D3-209ENST00000394804 SENP2Q9HC62 589 aa13.07□□□□□ -0.32
UBE2D3-209ENST00000394804 PHRF1Q9P1Y6 1649 aaKnown RBP13.07□□□□□ -0.32
UBE2D3-209ENST00000394804 HSF2BPO75031 334 aa13.07□□□□□ -0.32
UBE2D3-209ENST00000394804 COBLO75128 1261 aa13.07□□□□□ -0.32
UBE2D3-209ENST00000394804 TFAP4Q01664 338 aa13.07□□□□□ -0.32
UBE2D3-209ENST00000394804 UBE4AQ14139 1066 aa13.07□□□□□ -0.32
UBE2D3-209ENST00000394804 CNNM4Q6P4Q7 775 aa13.07□□□□□ -0.32
UBE2D3-209ENST00000394804 ACRBPQ8NEB7 543 aa13.07□□□□□ -0.32
UBE2D3-209ENST00000394804 WDR24Q96S15 920 aa13.07□□□□□ -0.32
UBE2D3-209ENST00000394804 POTEAQ6S8J7 498 aa13.07□□□□□ -0.32
UBE2D3-209ENST00000394804 PDE11AQ9HCR9 933 aa13.07□□□□□ -0.32
UBE2D3-209ENST00000394804 OPA1O60313 960 aa13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 ERLIN2O94905 339 aa13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 FMR1Q06787 632 aaKnown RBP eCLIP13.06□□□□□ -0.321e-7■□□□□ 9.5
UBE2D3-209ENST00000394804 FAM182BQ5T319 152 aa13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 KRT79Q5XKE5 535 aa13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 C10orf67Q8IYJ2 551 aa13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 AFAP1L1Q8TED9 768 aa13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 RWDD2AQ9UIY3 292 aa13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 MRFAP1Q9Y605 127 aa13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 SV2BQ7L1I2 683 aa13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 VPS36Q86VN1 386 aa13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 SECISBP2LQ93073 1101 aaKnown RBP13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 RASSF4Q9H2L5 321 aa13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 ZNF658Q5TYW1 1059 aaPredicted RBP13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 KRT25Q7Z3Z0 450 aa13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 CABP7Q86V35 215 aa13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 GJD4Q96KN9 370 aaPredicted RBP13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 TFCP2L1Q9NZI6 479 aa13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 RGS17Q9UGC6 210 aaPredicted RBP13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 ADGRG1Q9Y653 693 aa13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 TEX33O43247 280 aa13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 CASP1P29466 404 aa13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 USP8P40818 1118 aa13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 DYNLL1P63167 89 aaKnown RBP13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 NONOQ15233 471 aaKnown RBP eCLIP13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 KRT31Q15323 416 aa13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 CDCA7Q9BWT1 371 aaPredicted RBP13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 PRDM4Q9UKN5 801 aa13.06□□□□□ -0.32
UBE2D3-209ENST00000394804 PLEKHA8P1O95397 391 aa13.05□□□□□ -0.32
UBE2D3-209ENST00000394804 PARP1P09874 1014 aaKnown RBP13.05□□□□□ -0.32
UBE2D3-209ENST00000394804 HLTFQ14527 1009 aaKnown RBP eCLIP13.05□□□□□ -0.32
UBE2D3-209ENST00000394804 TPTE2Q6XPS3 522 aa13.05□□□□□ -0.32
UBE2D3-209ENST00000394804 PNMA1Q8ND90 353 aa13.05□□□□□ -0.32
UBE2D3-209ENST00000394804 FAM76AQ8TAV0 307 aa13.05□□□□□ -0.32
UBE2D3-209ENST00000394804 LTN1O94822 1766 aa13.05□□□□□ -0.32
UBE2D3-209ENST00000394804 LRRC37A3O60309 1634 aa13.05□□□□□ -0.32
UBE2D3-209ENST00000394804 ODF2Q5BJF6 829 aa13.05□□□□□ -0.32
UBE2D3-209ENST00000394804 SUSD4Q5VX71 490 aa13.05□□□□□ -0.32
UBE2D3-209ENST00000394804 ELOA2Q8IYF1 753 aaPredicted RBP13.05□□□□□ -0.32
UBE2D3-209ENST00000394804 TC2NQ8N9U0 490 aa13.05□□□□□ -0.32
UBE2D3-209ENST00000394804 EPC1Q9H2F5 836 aa13.05□□□□□ -0.32
UBE2D3-209ENST00000394804 PARP3Q9Y6F1 533 aa13.05□□□□□ -0.32
UBE2D3-209ENST00000394804 PNPLA7Q6ZV29 1317 aa13.05□□□□□ -0.32
UBE2D3-209ENST00000394804 MPHOSPH10O00566 681 aaKnown RBP13.05□□□□□ -0.32
UBE2D3-209ENST00000394804 CCNT1O60563 726 aaKnown RBP13.05□□□□□ -0.32
UBE2D3-209ENST00000394804 RXRBP28702 533 aa13.05□□□□□ -0.32
UBE2D3-209ENST00000394804 RPGRQ92834 1020 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms