RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 BRMS1Q9HCU9 246 aa20.16■□□□□ 0.82
MBD4-202ENST00000393278 FRMPD2Q68DX3 1309 aaPredicted RBP20.15■□□□□ 0.82
MBD4-202ENST00000393278 GH2P01242 217 aa20.15■□□□□ 0.82
MBD4-202ENST00000393278 JAG1P78504 1218 aa20.15■□□□□ 0.82
MBD4-202ENST00000393278 ZNF543Q08ER8 600 aa20.15■□□□□ 0.82
MBD4-202ENST00000393278 TNFAIP1Q13829 316 aa20.15■□□□□ 0.82
MBD4-202ENST00000393278 STK38Q15208 465 aa20.15■□□□□ 0.82
MBD4-202ENST00000393278 SAMD7Q7Z3H4 446 aa20.15■□□□□ 0.82
MBD4-202ENST00000393278 SIAH1Q8IUQ4 282 aa20.15■□□□□ 0.82
MBD4-202ENST00000393278 CDAN1Q8IWY9 1227 aa20.15■□□□□ 0.82
MBD4-202ENST00000393278 CPVLQ9H3G5 476 aa20.15■□□□□ 0.82
MBD4-202ENST00000393278 CABP5Q9NP86 173 aa20.15■□□□□ 0.82
MBD4-202ENST00000393278 FSD2A1L4K1 749 aa20.14■□□□□ 0.81
MBD4-202ENST00000393278 KIF4BQ2VIQ3 1234 aa20.14■□□□□ 0.81
MBD4-202ENST00000393278 CCDC183Q5T5S1 534 aa20.14■□□□□ 0.81
MBD4-202ENST00000393278 FAM177A1Q8N128 213 aaPredicted RBP20.14■□□□□ 0.81
MBD4-202ENST00000393278 RIOX1Q9H6W3 641 aa20.14■□□□□ 0.81
MBD4-202ENST00000393278 SPTLC2O15270 562 aa20.13■□□□□ 0.81
MBD4-202ENST00000393278 LIG1P18858 919 aa20.13■□□□□ 0.81
MBD4-202ENST00000393278 CALML3P27482 149 aa20.13■□□□□ 0.81
MBD4-202ENST00000393278 ME1P48163 572 aa20.13■□□□□ 0.81
MBD4-202ENST00000393278 NLRP5P59047 1200 aa20.13■□□□□ 0.81
MBD4-202ENST00000393278 MAP3K10Q02779 954 aa20.13■□□□□ 0.81
MBD4-202ENST00000393278 RASA3Q14644 834 aa20.13■□□□□ 0.81
MBD4-202ENST00000393278 SF3A1Q15459 793 aaKnown RBP20.13■□□□□ 0.81
MBD4-202ENST00000393278 TBC1D10BQ4KMP7 808 aaPredicted RBP20.13■□□□□ 0.81
MBD4-202ENST00000393278 RILPL1Q5EBL4 403 aa20.13■□□□□ 0.81
MBD4-202ENST00000393278 GPATCH4Q5T3I0 446 aaKnown RBP20.13■□□□□ 0.81
MBD4-202ENST00000393278 WWC2Q6AWC2 1192 aa20.13■□□□□ 0.81
MBD4-202ENST00000393278 BICD2Q8TD16 824 aa20.13■□□□□ 0.81
MBD4-202ENST00000393278 GPKOWQ92917 476 aaPredicted RBP eCLIP20.13■□□□□ 0.812e-7■■■□□ 18.7
MBD4-202ENST00000393278 TNFRSF25Q93038 417 aa20.13■□□□□ 0.81
MBD4-202ENST00000393278 RRP36Q96EU6 259 aaKnown RBP20.13■□□□□ 0.81
MBD4-202ENST00000393278 UBA5Q9GZZ9 404 aa20.13■□□□□ 0.81
MBD4-202ENST00000393278 BARHL2Q9NY43 387 aa20.13■□□□□ 0.81
MBD4-202ENST00000393278 ISY1Q9ULR0 285 aaKnown RBP20.13■□□□□ 0.81
MBD4-202ENST00000393278 SBF1O95248 1867 aa20.13■□□□□ 0.81
MBD4-202ENST00000393278 SLC39A14Q15043 492 aa20.13■□□□□ 0.81
MBD4-202ENST00000393278 GPC2Q8N158 579 aa20.13■□□□□ 0.81
MBD4-202ENST00000393278 PCDHA7Q9UN72 937 aa20.13■□□□□ 0.81
MBD4-202ENST00000393278 GOLGA6L3A6NEY3 463 aa20.12■□□□□ 0.81
MBD4-202ENST00000393278 H7C1D1 291 aa20.12■□□□□ 0.81
MBD4-202ENST00000393278 STXBP3O00186 592 aa20.12■□□□□ 0.81
MBD4-202ENST00000393278 TOB1P50616 345 aaPredicted RBP20.12■□□□□ 0.81
MBD4-202ENST00000393278 PTPAQ15257 358 aa20.12■□□□□ 0.81
MBD4-202ENST00000393278 CCDC148Q8NFR7 591 aa20.12■□□□□ 0.81
MBD4-202ENST00000393278 DCAF4Q8WV16 495 aa20.12■□□□□ 0.81
MBD4-202ENST00000393278 GPCPD1Q9NPB8 672 aa20.12■□□□□ 0.81
MBD4-202ENST00000393278 SYNPO2Q9UMS6 1093 aa20.12■□□□□ 0.81
MBD4-202ENST00000393278 TYW1BQ6NUM6 668 aa20.11■□□□□ 0.81
MBD4-202ENST00000393278 HEATR3Q7Z4Q2 680 aa20.11■□□□□ 0.81
MBD4-202ENST00000393278 GAS2L3Q86XJ1 694 aa20.11■□□□□ 0.81
MBD4-202ENST00000393278 GMCL1P1Q8NEA9 526 aa20.11■□□□□ 0.81
MBD4-202ENST00000393278 TEPSINQ96N21 525 aa20.11■□□□□ 0.81
MBD4-202ENST00000393278 GPRC5DQ9NZD1 345 aa20.11■□□□□ 0.81
MBD4-202ENST00000393278 SEC63Q9UGP8 760 aaKnown RBP20.11■□□□□ 0.81
MBD4-202ENST00000393278 HACL1Q9UJ83 578 aa20.11■□□□□ 0.81
MBD4-202ENST00000393278 ASTN2O75129 1339 aaPredicted RBP20.11■□□□□ 0.81
MBD4-202ENST00000393278 SYCE3A1L190 88 aa20.1■□□□□ 0.81
MBD4-202ENST00000393278 CCDC96Q2M329 555 aa20.1■□□□□ 0.81
MBD4-202ENST00000393278 SLFN13Q68D06 897 aa20.1■□□□□ 0.81
MBD4-202ENST00000393278 ADALQ6DHV7 355 aa20.1■□□□□ 0.81
MBD4-202ENST00000393278 MIGA2Q7L4E1 593 aa20.1■□□□□ 0.81
MBD4-202ENST00000393278 HOMER1Q86YM7 354 aa20.1■□□□□ 0.81
MBD4-202ENST00000393278 PIGSQ96S52 555 aa20.1■□□□□ 0.81
MBD4-202ENST00000393278 VAT1LQ9HCJ6 419 aa20.1■□□□□ 0.81
MBD4-202ENST00000393278 ZBTB21Q9ULJ3 1066 aa20.1■□□□□ 0.81
MBD4-202ENST00000393278 A0A1W2PQ27 194 aa20.1■□□□□ 0.81
MBD4-202ENST00000393278 A0A1W2PQ64 194 aa20.1■□□□□ 0.81
MBD4-202ENST00000393278 A0A1W2PQD8 194 aa20.1■□□□□ 0.81
MBD4-202ENST00000393278 PPP6R2O75170 966 aa20.1■□□□□ 0.81
MBD4-202ENST00000393278 YBX3P16989 372 aaKnown RBP eCLIP20.1■□□□□ 0.811e-7■□□□□ 10.3
MBD4-202ENST00000393278 EARS2Q5JPH6 523 aaKnown RBP20.1■□□□□ 0.81
MBD4-202ENST00000393278 GALNT17Q6IS24 598 aa20.1■□□□□ 0.81
MBD4-202ENST00000393278 DAGLBQ8NCG7 672 aa20.1■□□□□ 0.81
MBD4-202ENST00000393278 PCDHA4Q9UN74 947 aa20.1■□□□□ 0.81
MBD4-202ENST00000393278 SCAF8Q9UPN6 1271 aaKnown RBP20.1■□□□□ 0.81
MBD4-202ENST00000393278 hCG_1984214I3L0E3 225 aa20.09■□□□□ 0.81
MBD4-202ENST00000393278 SLC1A4P43007 532 aa20.09■□□□□ 0.81
MBD4-202ENST00000393278 TTBK2Q6IQ55 1244 aa20.09■□□□□ 0.81
MBD4-202ENST00000393278 LRSAM1Q6UWE0 723 aa20.09■□□□□ 0.81
MBD4-202ENST00000393278 CCAR1Q8IX12 1150 aaKnown RBP20.09■□□□□ 0.81
MBD4-202ENST00000393278 BLIDQ8IZY5 108 aa20.09■□□□□ 0.81
MBD4-202ENST00000393278 ZNF713Q8N859 430 aaPredicted RBP20.09■□□□□ 0.81
MBD4-202ENST00000393278 JMYQ8N9B5 988 aa20.09■□□□□ 0.81
MBD4-202ENST00000393278 CCDC12Q8WUD4 166 aaPredicted RBP20.09■□□□□ 0.81
MBD4-202ENST00000393278 GMCL1Q96IK5 515 aa20.09■□□□□ 0.81
MBD4-202ENST00000393278 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.09■□□□□ 0.81
MBD4-202ENST00000393278 DDX19AQ9NUU7 478 aaKnown RBP20.09■□□□□ 0.81
MBD4-202ENST00000393278 DACT1Q9NYF0 836 aa20.09■□□□□ 0.81
MBD4-202ENST00000393278 FAM205CA6NFA0 338 aa20.08■□□□□ 0.81
MBD4-202ENST00000393278 F5H6K3 240 aa20.08■□□□□ 0.81
MBD4-202ENST00000393278 NR1I2O75469 434 aa20.08■□□□□ 0.81
MBD4-202ENST00000393278 LETM1O95202 739 aaPredicted RBP20.08■□□□□ 0.81
MBD4-202ENST00000393278 CAP2P40123 477 aa20.08■□□□□ 0.81
MBD4-202ENST00000393278 KLRC3Q07444 240 aa20.08■□□□□ 0.81
MBD4-202ENST00000393278 KCTD1Q719H9 257 aa20.08■□□□□ 0.81
MBD4-202ENST00000393278 ADGRF4Q8IZF3 695 aa20.08■□□□□ 0.81
MBD4-202ENST00000393278 JMJD4Q9H9V9 463 aa20.08■□□□□ 0.81
MBD4-202ENST00000393278 A0A1W2PRG0 241 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms