RNA–Protein interactions for RNA: ENST00000393062.6

SPIRE2-202, Transcript of spire type actin nucleation factor 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE2, Length 2,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-202ENST00000393062 ZC3H12CQ9C0D7 883 aaKnown RBP24.28■■□□□ 1.48
SPIRE2-202ENST00000393062 COA1Q9GZY4 146 aa24.28■■□□□ 1.48
SPIRE2-202ENST00000393062 FANCCQ00597 558 aa24.27■■□□□ 1.48
SPIRE2-202ENST00000393062 SF3B2Q13435 895 aaKnown RBP24.27■■□□□ 1.48
SPIRE2-202ENST00000393062 NT5DC1Q5TFE4 455 aa24.27■■□□□ 1.48
SPIRE2-202ENST00000393062 CERS3Q8IU89 383 aa24.27■■□□□ 1.48
SPIRE2-202ENST00000393062 DPF2Q92785 391 aa24.27■■□□□ 1.48
SPIRE2-202ENST00000393062 CEP95Q96GE4 821 aa24.27■■□□□ 1.48
SPIRE2-202ENST00000393062 FANCLQ9NW38 375 aa24.27■■□□□ 1.48
SPIRE2-202ENST00000393062 MORC2Q9Y6X9 1032 aaPredicted RBP24.27■■□□□ 1.48
SPIRE2-202ENST00000393062 AFMP43652 599 aa24.27■■□□□ 1.48
SPIRE2-202ENST00000393062 HSP90AA4PQ58FG1 418 aa24.27■■□□□ 1.48
SPIRE2-202ENST00000393062 CCDC178Q5BJE1 867 aa24.27■■□□□ 1.48
SPIRE2-202ENST00000393062 SLF2Q8IX21 1173 aa24.27■■□□□ 1.48
SPIRE2-202ENST00000393062 NEDD1Q8NHV4 660 aa24.27■■□□□ 1.48
SPIRE2-202ENST00000393062 HOOK1Q9UJC3 728 aaKnown RBP24.27■■□□□ 1.48
SPIRE2-202ENST00000393062 USP17L2Q6R6M4 530 aa24.26■■□□□ 1.47
SPIRE2-202ENST00000393062 SMARCE1Q969G3 411 aa24.26■■□□□ 1.47
SPIRE2-202ENST00000393062 FERMT2Q96AC1 680 aa24.26■■□□□ 1.47
SPIRE2-202ENST00000393062 DDX4Q9NQI0 724 aaKnown RBP24.26■■□□□ 1.47
SPIRE2-202ENST00000393062 KLRF2D3W0D1 207 aa24.26■■□□□ 1.47
SPIRE2-202ENST00000393062 NT5C2P49902 561 aa24.26■■□□□ 1.47
SPIRE2-202ENST00000393062 SCNN1DP51172 638 aa24.26■■□□□ 1.47
SPIRE2-202ENST00000393062 TPM4P67936 248 aa24.26■■□□□ 1.47
SPIRE2-202ENST00000393062 FMR1Q06787 632 aaKnown RBP eCLIP24.26■■□□□ 1.47
SPIRE2-202ENST00000393062 PTPN21Q16825 1174 aa24.26■■□□□ 1.47
SPIRE2-202ENST00000393062 TMC6Q7Z403 805 aa24.26■■□□□ 1.47
SPIRE2-202ENST00000393062 HEATR3Q7Z4Q2 680 aa24.26■■□□□ 1.47
SPIRE2-202ENST00000393062 DEFB132Q7Z7B7 95 aa24.26■■□□□ 1.47
SPIRE2-202ENST00000393062 ZNF287Q9HBT7 754 aa24.26■■□□□ 1.47
SPIRE2-202ENST00000393062 KCNQ5Q9NR82 932 aa24.26■■□□□ 1.47
SPIRE2-202ENST00000393062 PCDHA4Q9UN74 947 aa24.26■■□□□ 1.47
SPIRE2-202ENST00000393062 M0R2N6 131 aa24.25■■□□□ 1.47
SPIRE2-202ENST00000393062 ALDH1B1P30837 517 aa24.25■■□□□ 1.47
SPIRE2-202ENST00000393062 MORC3Q14149 939 aa24.25■■□□□ 1.47
SPIRE2-202ENST00000393062 DPP8Q6V1X1 898 aaPredicted RBP24.25■■□□□ 1.47
SPIRE2-202ENST00000393062 MASTLQ96GX5 879 aa24.25■■□□□ 1.47
SPIRE2-202ENST00000393062 BMP15O95972 392 aa24.25■■□□□ 1.47
SPIRE2-202ENST00000393062 GNAQP50148 359 aa24.25■■□□□ 1.47
SPIRE2-202ENST00000393062 CCZ1BP86790 482 aa24.25■■□□□ 1.47
SPIRE2-202ENST00000393062 CCZ1P86791 482 aaPredicted RBP24.25■■□□□ 1.47
SPIRE2-202ENST00000393062 SPATA20Q8TB22 786 aa24.25■■□□□ 1.47
SPIRE2-202ENST00000393062 MED15Q96RN5 788 aa24.25■■□□□ 1.47
SPIRE2-202ENST00000393062 TTF2Q9UNY4 1162 aaKnown RBP24.25■■□□□ 1.47
SPIRE2-202ENST00000393062 SKILP12757 684 aa24.24■■□□□ 1.47
SPIRE2-202ENST00000393062 CALML3P27482 149 aa24.24■■□□□ 1.47
SPIRE2-202ENST00000393062 STAMQ92783 540 aa24.24■■□□□ 1.47
SPIRE2-202ENST00000393062 PAGE5Q96GU1 130 aa24.24■■□□□ 1.47
SPIRE2-202ENST00000393062 SH3GLB2Q9NR46 395 aa24.24■■□□□ 1.47
SPIRE2-202ENST00000393062 STXBP3O00186 592 aa24.23■■□□□ 1.47
SPIRE2-202ENST00000393062 SLFN14P0C7P3 912 aa24.23■■□□□ 1.47
SPIRE2-202ENST00000393062 CDC25AP30304 524 aa24.23■■□□□ 1.47
SPIRE2-202ENST00000393062 C4orf32Q8N8J7 132 aa24.23■■□□□ 1.47
SPIRE2-202ENST00000393062 PCDHA6Q9UN73 950 aa24.23■■□□□ 1.47
SPIRE2-202ENST00000393062 PCDHA8Q9Y5H6 950 aa24.23■■□□□ 1.47
SPIRE2-202ENST00000393062 SLURP2P0DP57 97 aa24.23■■□□□ 1.47
SPIRE2-202ENST00000393062 TRAPPC10P48553 1259 aa24.23■■□□□ 1.47
SPIRE2-202ENST00000393062 TRMT44Q8IYL2 757 aaKnown RBP24.23■■□□□ 1.47
SPIRE2-202ENST00000393062 OSBPL5Q9H0X9 879 aaPredicted RBP24.23■■□□□ 1.47
SPIRE2-202ENST00000393062 BARHL2Q9NY43 387 aa24.23■■□□□ 1.47
SPIRE2-202ENST00000393062 USP27XA6NNY8 438 aa24.22■■□□□ 1.47
SPIRE2-202ENST00000393062 KANK3Q6NY19 840 aa24.22■■□□□ 1.47
SPIRE2-202ENST00000393062 SH3RF1Q7Z6J0 888 aa24.22■■□□□ 1.47
SPIRE2-202ENST00000393062 CLEC10AQ8IUN9 316 aa24.22■■□□□ 1.47
SPIRE2-202ENST00000393062 C16orf45Q96MC5 204 aaPredicted RBP24.22■■□□□ 1.47
SPIRE2-202ENST00000393062 VAT1LQ9HCJ6 419 aa24.22■■□□□ 1.47
SPIRE2-202ENST00000393062 FOCADQ5VW36 1801 aa24.22■■□□□ 1.47
SPIRE2-202ENST00000393062 UBASH3AP57075 661 aa24.22■■□□□ 1.47
SPIRE2-202ENST00000393062 ARMCX5Q6P1M9 558 aa24.22■■□□□ 1.47
SPIRE2-202ENST00000393062 HOMER1Q86YM7 354 aa24.22■■□□□ 1.47
SPIRE2-202ENST00000393062 ZNF622Q969S3 477 aaKnown RBP eCLIP24.22■■□□□ 1.47
SPIRE2-202ENST00000393062 ADAMTSL1Q8N6G6 1762 aa24.21■■□□□ 1.47
SPIRE2-202ENST00000393062 USP17L5A8MUK1 530 aa24.21■■□□□ 1.47
SPIRE2-202ENST00000393062 SERPINC1P01008 464 aa24.21■■□□□ 1.47
SPIRE2-202ENST00000393062 EIF6P56537 245 aaKnown RBP24.21■■□□□ 1.47
SPIRE2-202ENST00000393062 PARP1P09874 1014 aaKnown RBP24.2■■□□□ 1.47
SPIRE2-202ENST00000393062 UBA5Q9GZZ9 404 aa24.2■■□□□ 1.47
SPIRE2-202ENST00000393062 DBNDD1Q9H9R9 158 aa24.2■■□□□ 1.47
SPIRE2-202ENST00000393062 USP40Q9NVE5 1235 aa24.2■■□□□ 1.47
SPIRE2-202ENST00000393062 IMPACTQ9P2X3 320 aa24.2■■□□□ 1.47
SPIRE2-202ENST00000393062 TMEM232C9JQI7 657 aa24.2■■□□□ 1.46
SPIRE2-202ENST00000393062 GABPAQ06546 454 aa24.2■■□□□ 1.46
SPIRE2-202ENST00000393062 INF2Q27J81 1249 aa24.2■■□□□ 1.46
SPIRE2-202ENST00000393062 MLKLQ8NB16 471 aa24.2■■□□□ 1.46
SPIRE2-202ENST00000393062 NEMFO60524 1076 aa24.19■■□□□ 1.46
SPIRE2-202ENST00000393062 TOP1P11387 765 aaKnown RBP24.19■■□□□ 1.46
SPIRE2-202ENST00000393062 AKR1B1P15121 316 aa24.19■■□□□ 1.46
SPIRE2-202ENST00000393062 E2F4Q16254 413 aa24.19■■□□□ 1.46
SPIRE2-202ENST00000393062 C2CD5Q86YS7 1000 aa24.19■■□□□ 1.46
SPIRE2-202ENST00000393062 PCDHAC2Q9Y5I4 1007 aa24.19■■□□□ 1.46
SPIRE2-202ENST00000393062 CCDC194A0A1B0GVG4 234 aa24.19■■□□□ 1.46
SPIRE2-202ENST00000393062 NOVP48745 357 aa24.19■■□□□ 1.46
SPIRE2-202ENST00000393062 CFAP100Q494V2 611 aa24.19■■□□□ 1.46
SPIRE2-202ENST00000393062 STYK1Q6J9G0 422 aa24.19■■□□□ 1.46
SPIRE2-202ENST00000393062 TSC1Q92574 1164 aa24.19■■□□□ 1.46
SPIRE2-202ENST00000393062 MTRQ99707 1265 aa24.19■■□□□ 1.46
SPIRE2-202ENST00000393062 TMEM60Q9H2L4 133 aa24.19■■□□□ 1.46
SPIRE2-202ENST00000393062 ZNF219Q9P2Y4 722 aaPredicted RBP24.19■■□□□ 1.46
SPIRE2-202ENST00000393062 NFE2L3Q9Y4A8 694 aa24.19■■□□□ 1.46
SPIRE2-202ENST00000393062 CD44P16070 742 aaKnown RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms