RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 AATFQ9NY61 560 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAF3IP2-208ENST00000392556 PHIPQ8WWQ0 1821 aa13.15□□□□□ -0.3
TRAF3IP2-208ENST00000392556 FLT1P17948 1338 aa13.15□□□□□ -0.3
TRAF3IP2-208ENST00000392556 PATL2C9JE40 543 aaKnown RBP13.15□□□□□ -0.3
TRAF3IP2-208ENST00000392556 AP5Z1O43299 807 aa13.15□□□□□ -0.3
TRAF3IP2-208ENST00000392556 BACE1P56817 501 aa13.15□□□□□ -0.3
TRAF3IP2-208ENST00000392556 MTFR1Q15390 333 aa13.15□□□□□ -0.3
TRAF3IP2-208ENST00000392556 NBPF20Q3BBV1 942 aa13.15□□□□□ -0.3
TRAF3IP2-208ENST00000392556 CEP135Q66GS9 1140 aa13.15□□□□□ -0.3
TRAF3IP2-208ENST00000392556 CCDC91Q7Z6B0 441 aa13.15□□□□□ -0.3
TRAF3IP2-208ENST00000392556 CRACR2BQ8N4Y2 399 aaPredicted RBP13.15□□□□□ -0.3
TRAF3IP2-208ENST00000392556 C16orf45Q96MC5 204 aaPredicted RBP13.15□□□□□ -0.3
TRAF3IP2-208ENST00000392556 MORF4L1Q9UBU8 362 aa13.15□□□□□ -0.3
TRAF3IP2-208ENST00000392556 TNRC18O15417 2968 aaPredicted RBP13.15□□□□□ -0.3
TRAF3IP2-208ENST00000392556 LOC285556D6RIA3 1793 aa13.15□□□□□ -0.3
TRAF3IP2-208ENST00000392556 PTPRFP10586 1907 aa13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 TRIM66O15016 1216 aa13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 ATP8B1O43520 1251 aa13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 SGPL1O95470 568 aa13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 GYS2P54840 703 aa13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 UBE2Q1Q7Z7E8 422 aa13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 SUGP1Q8IWZ8 645 aaKnown RBP13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 FBXO18Q8NFZ0 1043 aa13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 SHISA4Q96DD7 197 aa13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 TMX1Q9H3N1 280 aa13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 MED4Q9NPJ6 270 aa13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 ZNF215Q9UL58 517 aaPredicted RBP13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 NR2E3Q9Y5X4 410 aa13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 PLA2G4AP47712 749 aa13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 MAP3K12Q12852 859 aa13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 TTF1Q15361 905 aaPredicted RBP13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 ZSCAN26Q16670 478 aa13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 TSGA10IPQ3SY00 556 aa13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 TRMT44Q8IYL2 757 aaKnown RBP13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 ANKRD13CQ8N6S4 541 aa13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 GOLGA5Q8TBA6 731 aa13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 U2AF1L4Q8WU68 220 aaKnown RBP13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 TGFBRAP1Q8WUH2 860 aa13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 UBXN6Q9BZV1 441 aa13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 EHD4Q9H223 541 aa13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 SNRKQ9NRH2 765 aa13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 DBNLQ9UJU6 430 aaKnown RBP13.14□□□□□ -0.31
TRAF3IP2-208ENST00000392556 CCDC171Q6TFL3 1326 aa13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 ZAP70P43403 619 aa13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 MCM2P49736 904 aa13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 HMGCS2P54868 508 aa13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 TTC31Q49AM3 519 aaPredicted RBP13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 TREML2Q5T2D2 321 aa13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 ANKLE1Q8NAG6 615 aa13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 CHAMP1Q96JM3 812 aa13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 ASCC2Q9H1I8 757 aaPredicted RBP13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 PSD3Q9NYI0 1048 aa13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 GABRQQ9UN88 632 aa13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 MGAMO43451 1857 aa13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 ZSWIM8A7E2V4 1837 aa13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 USP17L10C9JJH3 530 aa13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 INHAP05111 366 aa13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 CYP7A1P22680 504 aa13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 PTGS1P23219 599 aa13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 MAGEA9P43362 315 aa13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 CUL4AQ13619 759 aa13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 CEP85Q6P2H3 762 aa13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 TTC6Q86TZ1 520 aa13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 MAPKAPK5Q8IW41 473 aa13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 NEK11Q8NG66 645 aa13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 INTS4Q96HW7 963 aaKnown RBP13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 DEF6Q9H4E7 631 aa13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 LCMT1Q9UIC8 334 aa13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 RRP15Q9Y3B9 282 aaKnown RBP13.13□□□□□ -0.31
TRAF3IP2-208ENST00000392556 GADD45BO75293 160 aaPredicted RBP13.12□□□□□ -0.31
TRAF3IP2-208ENST00000392556 HMMRO75330 724 aa13.12□□□□□ -0.31
TRAF3IP2-208ENST00000392556 FARP2O94887 1054 aaPredicted RBP13.12□□□□□ -0.31
TRAF3IP2-208ENST00000392556 SLU7O95391 586 aaKnown RBP13.12□□□□□ -0.31
TRAF3IP2-208ENST00000392556 MYCP01106 439 aaPredicted RBP13.12□□□□□ -0.31
TRAF3IP2-208ENST00000392556 HMGCRP04035 888 aa13.12□□□□□ -0.31
TRAF3IP2-208ENST00000392556 MCCP23508 829 aa13.12□□□□□ -0.31
TRAF3IP2-208ENST00000392556 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.12□□□□□ -0.31
TRAF3IP2-208ENST00000392556 RPAP2Q8IXW5 612 aaPredicted RBP13.12□□□□□ -0.31
TRAF3IP2-208ENST00000392556 SOCS4Q8WXH5 440 aa13.12□□□□□ -0.31
TRAF3IP2-208ENST00000392556 EAF2Q96CJ1 260 aaPredicted RBP13.12□□□□□ -0.31
TRAF3IP2-208ENST00000392556 CXorf56Q9H5V9 222 aa13.12□□□□□ -0.31
TRAF3IP2-208ENST00000392556 PAK6Q9NQU5 681 aaPredicted RBP13.12□□□□□ -0.31
TRAF3IP2-208ENST00000392556 FAM196BA6NMK8 535 aa13.11□□□□□ -0.31
TRAF3IP2-208ENST00000392556 PNMA6AP0CW24 399 aaPredicted RBP13.11□□□□□ -0.31
TRAF3IP2-208ENST00000392556 ELF2Q15723 593 aa13.11□□□□□ -0.31
TRAF3IP2-208ENST00000392556 TPD52L1Q16890 204 aaPredicted RBP13.11□□□□□ -0.31
TRAF3IP2-208ENST00000392556 USP17L2Q6R6M4 530 aa13.11□□□□□ -0.31
TRAF3IP2-208ENST00000392556 EP400NLQ6ZTU2 488 aa13.11□□□□□ -0.31
TRAF3IP2-208ENST00000392556 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRAF3IP2-208ENST00000392556 RPAINQ86UA6 219 aa13.11□□□□□ -0.31
TRAF3IP2-208ENST00000392556 UNC93B1Q9H1C4 597 aa13.11□□□□□ -0.31
TRAF3IP2-208ENST00000392556 PIH1D3Q9NQM4 214 aaKnown RBP13.11□□□□□ -0.31
TRAF3IP2-208ENST00000392556 ZBTB21Q9ULJ3 1066 aa13.11□□□□□ -0.31
TRAF3IP2-208ENST00000392556 IDH1O75874 414 aaKnown RBP13.11□□□□□ -0.31
TRAF3IP2-208ENST00000392556 MAPK4P31152 587 aa13.11□□□□□ -0.31
TRAF3IP2-208ENST00000392556 USP14P54578 494 aa13.11□□□□□ -0.31
TRAF3IP2-208ENST00000392556 TATDN1Q6P1N9 297 aa13.11□□□□□ -0.31
TRAF3IP2-208ENST00000392556 SPC24Q8NBT2 197 aa13.11□□□□□ -0.31
TRAF3IP2-208ENST00000392556 DPF3Q92784 378 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms