RNA–Protein interactions for RNA: ENST00000390387.3

TRBV3-1-201, Transcript of T cell receptor beta variable 3-1, humanhuman

APPRIS P1 BASIC

Gene TRBV3-1, Length 391 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV3-1-201ENST00000390387 APBB1O00213 710 aa11.27□□□□□ -0.61
TRBV3-1-201ENST00000390387 WDR46O15213 610 aaKnown RBP11.27□□□□□ -0.61
TRBV3-1-201ENST00000390387 PRKAB2O43741 272 aa11.27□□□□□ -0.61
TRBV3-1-201ENST00000390387 MBD4O95243 580 aa11.27□□□□□ -0.61
TRBV3-1-201ENST00000390387 ADCYAP1R1P41586 468 aa11.27□□□□□ -0.61
TRBV3-1-201ENST00000390387 HNRNPUQ00839 825 aaKnown RBP eCLIP11.27□□□□□ -0.61
TRBV3-1-201ENST00000390387 FAM47AQ5JRC9 791 aa11.27□□□□□ -0.61
TRBV3-1-201ENST00000390387 ZNF697Q5TEC3 545 aa11.27□□□□□ -0.61
TRBV3-1-201ENST00000390387 C1orf53Q5VUE5 145 aa11.27□□□□□ -0.61
TRBV3-1-201ENST00000390387 SH3RF1Q7Z6J0 888 aa11.27□□□□□ -0.61
TRBV3-1-201ENST00000390387 CLASRPQ8N2M8 674 aaKnown RBP11.27□□□□□ -0.61
TRBV3-1-201ENST00000390387 BADQ92934 168 aa11.27□□□□□ -0.61
TRBV3-1-201ENST00000390387 FERMT2Q96AC1 680 aa11.27□□□□□ -0.61
TRBV3-1-201ENST00000390387 TRIM43Q96BQ3 446 aaPredicted RBP11.27□□□□□ -0.61
TRBV3-1-201ENST00000390387 KIF1BPQ96EK5 621 aa11.27□□□□□ -0.61
TRBV3-1-201ENST00000390387 SH2D4AQ9H788 454 aa11.27□□□□□ -0.61
TRBV3-1-201ENST00000390387 ARHGEF10LQ9HCE6 1279 aa11.27□□□□□ -0.61
TRBV3-1-201ENST00000390387 PDLIM7Q9NR12 457 aa11.27□□□□□ -0.61
TRBV3-1-201ENST00000390387 SLC5A4Q9NY91 659 aa11.27□□□□□ -0.61
TRBV3-1-201ENST00000390387 ADAMTS5Q9UNA0 930 aa11.27□□□□□ -0.61
TRBV3-1-201ENST00000390387 MUC3AQ02505 3323 aa11.27□□□□□ -0.61
TRBV3-1-201ENST00000390387 PARP14Q460N5 1801 aa11.27□□□□□ -0.61
TRBV3-1-201ENST00000390387 CYP2D7A0A087X1C5 515 aa11.26□□□□□ -0.61
TRBV3-1-201ENST00000390387 CHGBP05060 677 aa11.26□□□□□ -0.61
TRBV3-1-201ENST00000390387 IFIT2P09913 472 aaKnown RBP11.26□□□□□ -0.61
TRBV3-1-201ENST00000390387 FCER1AP12319 257 aa11.26□□□□□ -0.61
TRBV3-1-201ENST00000390387 ADD2P35612 726 aa11.26□□□□□ -0.61
TRBV3-1-201ENST00000390387 CDK8P49336 464 aa11.26□□□□□ -0.61
TRBV3-1-201ENST00000390387 C12orf60Q5U649 245 aa11.26□□□□□ -0.61
TRBV3-1-201ENST00000390387 SIRT2Q8IXJ6 389 aa11.26□□□□□ -0.61
TRBV3-1-201ENST00000390387 ATP8A2Q9NTI2 1148 aa11.26□□□□□ -0.61
TRBV3-1-201ENST00000390387 FBXO28Q9NVF7 368 aa11.26□□□□□ -0.61
TRBV3-1-201ENST00000390387 PAG1Q9NWQ8 432 aa11.26□□□□□ -0.61
TRBV3-1-201ENST00000390387 NRBP1Q9UHY1 535 aa11.26□□□□□ -0.61
TRBV3-1-201ENST00000390387 SLC25A27O95847 323 aa11.25□□□□□ -0.61
TRBV3-1-201ENST00000390387 PGK2P07205 417 aa11.25□□□□□ -0.61
TRBV3-1-201ENST00000390387 EEF2P13639 858 aaKnown RBP11.25□□□□□ -0.61
TRBV3-1-201ENST00000390387 ITGB8P26012 769 aa11.25□□□□□ -0.61
TRBV3-1-201ENST00000390387 TLE2Q04725 743 aa11.25□□□□□ -0.61
TRBV3-1-201ENST00000390387 C16orf86Q6ZW13 317 aa11.25□□□□□ -0.61
TRBV3-1-201ENST00000390387 REPS2Q8NFH8 660 aa11.25□□□□□ -0.61
TRBV3-1-201ENST00000390387 CCDC17Q96LX7 622 aa11.25□□□□□ -0.61
TRBV3-1-201ENST00000390387 CDX2Q99626 313 aaPredicted RBP11.25□□□□□ -0.61
TRBV3-1-201ENST00000390387 TINF2Q9BSI4 451 aa11.25□□□□□ -0.61
TRBV3-1-201ENST00000390387 SEMA6BQ9H3T3 888 aa11.25□□□□□ -0.61
TRBV3-1-201ENST00000390387 XPNPEP3Q9NQH7 507 aa11.25□□□□□ -0.61
TRBV3-1-201ENST00000390387 PHF24Q9UPV7 400 aa11.25□□□□□ -0.61
TRBV3-1-201ENST00000390387 ROBO3Q96MS0 1386 aa11.25□□□□□ -0.61
TRBV3-1-201ENST00000390387 MYH8P13535 1937 aa11.25□□□□□ -0.61
TRBV3-1-201ENST00000390387 COL11A1P12107 1806 aaPredicted RBP11.24□□□□□ -0.61
TRBV3-1-201ENST00000390387 USP17L12C9JPN9 530 aa11.24□□□□□ -0.61
TRBV3-1-201ENST00000390387 USP17L21D6R901 530 aa11.24□□□□□ -0.61
TRBV3-1-201ENST00000390387 ZNF865P0CJ78 1059 aaPredicted RBP11.24□□□□□ -0.61
TRBV3-1-201ENST00000390387 RARBP10826 455 aa11.24□□□□□ -0.61
TRBV3-1-201ENST00000390387 TAL1P17542 331 aaPredicted RBP11.24□□□□□ -0.61
TRBV3-1-201ENST00000390387 ATP5JP18859 108 aa11.24□□□□□ -0.61
TRBV3-1-201ENST00000390387 SMAD3P84022 425 aaKnown RBP11.24□□□□□ -0.61
TRBV3-1-201ENST00000390387 ZNF792Q3KQV3 632 aa11.24□□□□□ -0.61
TRBV3-1-201ENST00000390387 RIOX2Q8IUF8 465 aa11.24□□□□□ -0.61
TRBV3-1-201ENST00000390387 RPAP2Q8IXW5 612 aaPredicted RBP11.24□□□□□ -0.61
TRBV3-1-201ENST00000390387 MMP19Q99542 508 aa11.24□□□□□ -0.61
TRBV3-1-201ENST00000390387 BCL11AQ9H165 835 aa11.24□□□□□ -0.61
TRBV3-1-201ENST00000390387 TTYH1Q9H313 450 aaPredicted RBP11.24□□□□□ -0.61
TRBV3-1-201ENST00000390387 BOLA2Q9H3K6 86 aa11.24□□□□□ -0.61
TRBV3-1-201ENST00000390387 ZNF214Q9UL59 606 aaPredicted RBP11.24□□□□□ -0.61
TRBV3-1-201ENST00000390387 PPP1R9AQ9ULJ8 1098 aa11.24□□□□□ -0.61
TRBV3-1-201ENST00000390387 DIS3Q9Y2L1 958 aaKnown RBP11.24□□□□□ -0.61
TRBV3-1-201ENST00000390387 BAZ2AQ9UIF9 1905 aaKnown RBP11.24□□□□□ -0.61
TRBV3-1-201ENST00000390387 ZBED9Q6R2W3 1325 aa11.24□□□□□ -0.61
TRBV3-1-201ENST00000390387 VWA5AO00534 786 aa11.23□□□□□ -0.61
TRBV3-1-201ENST00000390387 RAB11FIP3O75154 756 aa11.23□□□□□ -0.61
TRBV3-1-201ENST00000390387 ADAMTS4O75173 837 aa11.23□□□□□ -0.61
TRBV3-1-201ENST00000390387 HMMRO75330 724 aa11.23□□□□□ -0.61
TRBV3-1-201ENST00000390387 PGK1P00558 417 aa11.23□□□□□ -0.61
TRBV3-1-201ENST00000390387 CLTBP09497 229 aa11.23□□□□□ -0.61
TRBV3-1-201ENST00000390387 STAT3P40763 770 aa11.23□□□□□ -0.61
TRBV3-1-201ENST00000390387 EPHB4P54760 987 aa11.23□□□□□ -0.61
TRBV3-1-201ENST00000390387 UBE3CQ15386 1083 aa11.23□□□□□ -0.61
TRBV3-1-201ENST00000390387 LENG1Q96BZ8 264 aaPredicted RBP11.23□□□□□ -0.61
TRBV3-1-201ENST00000390387 HAUS7Q99871 368 aa11.23□□□□□ -0.61
TRBV3-1-201ENST00000390387 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.23□□□□□ -0.61
TRBV3-1-201ENST00000390387 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.23□□□□□ -0.61
TRBV3-1-201ENST00000390387 KANSL2Q9H9L4 492 aa11.23□□□□□ -0.61
TRBV3-1-201ENST00000390387 ZBTB40Q9NUA8 1239 aa11.23□□□□□ -0.61
TRBV3-1-201ENST00000390387 TACC3Q9Y6A5 838 aa11.23□□□□□ -0.61
TRBV3-1-201ENST00000390387 TTC28Q96AY4 2481 aa11.23□□□□□ -0.61
TRBV3-1-201ENST00000390387 A0A1W2PQ45 241 aaPredicted RBP11.22□□□□□ -0.61
TRBV3-1-201ENST00000390387 A0A1W2PQY0 241 aa11.22□□□□□ -0.61
TRBV3-1-201ENST00000390387 SMCHD1A6NHR9 2005 aa11.22□□□□□ -0.61
TRBV3-1-201ENST00000390387 KIAA0355O15063 1070 aa11.22□□□□□ -0.61
TRBV3-1-201ENST00000390387 AKR1A1P14550 325 aa11.22□□□□□ -0.61
TRBV3-1-201ENST00000390387 KCTD2Q14681 263 aa11.22□□□□□ -0.61
TRBV3-1-201ENST00000390387 FAM83BQ5T0W9 1011 aa11.22□□□□□ -0.61
TRBV3-1-201ENST00000390387 CTR9Q6PD62 1173 aa11.22□□□□□ -0.61
TRBV3-1-201ENST00000390387 RNF180Q86T96 592 aa11.22□□□□□ -0.61
TRBV3-1-201ENST00000390387 AMOTL1Q8IY63 956 aa11.22□□□□□ -0.61
TRBV3-1-201ENST00000390387 MAFAQ8NHW3 353 aaPredicted RBP11.22□□□□□ -0.61
TRBV3-1-201ENST00000390387 MYLIPQ8WY64 445 aa11.22□□□□□ -0.61
TRBV3-1-201ENST00000390387 GREB1LQ9C091 1923 aaPredicted RBP11.22□□□□□ -0.61
TRBV3-1-201ENST00000390387 PUS7LQ9H0K6 701 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms