RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 DIS3LQ8TF46 1054 aaKnown RBP15.52■□□□□ 0.08
RPAIN-202ENST00000381208 OSBP2Q969R2 916 aa15.52■□□□□ 0.08
RPAIN-202ENST00000381208 PRO3102Q9H379 93 aa15.52■□□□□ 0.08
RPAIN-202ENST00000381208 RBM27Q9P2N5 1060 aaKnown RBP15.52■□□□□ 0.08
RPAIN-202ENST00000381208 ROBO3Q96MS0 1386 aa15.52■□□□□ 0.08
RPAIN-202ENST00000381208 PATL2C9JE40 543 aaKnown RBP15.51■□□□□ 0.07
RPAIN-202ENST00000381208 CHGBP05060 677 aa15.51■□□□□ 0.07
RPAIN-202ENST00000381208 ADORA2AP29274 412 aa15.51■□□□□ 0.07
RPAIN-202ENST00000381208 CCND3P30281 292 aaPredicted RBP15.51■□□□□ 0.07
RPAIN-202ENST00000381208 TDO2P48775 406 aa15.51■□□□□ 0.07
RPAIN-202ENST00000381208 MNX1P50219 401 aaPredicted RBP15.51■□□□□ 0.07
RPAIN-202ENST00000381208 RRP1P56182 461 aaKnown RBP15.51■□□□□ 0.07
RPAIN-202ENST00000381208 PLS1Q14651 629 aa15.51■□□□□ 0.07
RPAIN-202ENST00000381208 SPICE1Q8N0Z3 855 aa15.51■□□□□ 0.07
RPAIN-202ENST00000381208 ATG4CQ96DT6 458 aa15.51■□□□□ 0.07
RPAIN-202ENST00000381208 NYAP2Q9P242 653 aa15.51■□□□□ 0.07
RPAIN-202ENST00000381208 DDX20Q9UHI6 824 aaKnown RBP15.51■□□□□ 0.07
RPAIN-202ENST00000381208 SYNPO2Q9UMS6 1093 aa15.51■□□□□ 0.07
RPAIN-202ENST00000381208 ADAMTS5Q9UNA0 930 aa15.51■□□□□ 0.07
RPAIN-202ENST00000381208 PCDHB15Q9Y5E8 787 aa15.51■□□□□ 0.07
RPAIN-202ENST00000381208 MINDY4BA8MYZ0 360 aa15.5■□□□□ 0.07
RPAIN-202ENST00000381208 APPP05067 770 aa15.5■□□□□ 0.07
RPAIN-202ENST00000381208 SLC3A2P08195 630 aaKnown RBP15.5■□□□□ 0.07
RPAIN-202ENST00000381208 FCER1AP12319 257 aa15.5■□□□□ 0.07
RPAIN-202ENST00000381208 AAMPQ13685 434 aa15.5■□□□□ 0.07
RPAIN-202ENST00000381208 KIAA1755Q5JYT7 1200 aa15.5■□□□□ 0.07
RPAIN-202ENST00000381208 PPP4R3BQ5MIZ7 849 aa15.5■□□□□ 0.07
RPAIN-202ENST00000381208 NCAPG2Q86XI2 1143 aa15.5■□□□□ 0.07
RPAIN-202ENST00000381208 ZNF444Q8N0Y2 327 aaPredicted RBP15.5■□□□□ 0.07
RPAIN-202ENST00000381208 MYH8P13535 1937 aa15.5■□□□□ 0.07
RPAIN-202ENST00000381208 BAZ2AQ9UIF9 1905 aaKnown RBP15.5■□□□□ 0.07
RPAIN-202ENST00000381208 COL6A1P12109 1028 aa15.49■□□□□ 0.07
RPAIN-202ENST00000381208 RASA1P20936 1047 aa15.49■□□□□ 0.07
RPAIN-202ENST00000381208 BMP8BP34820 402 aa15.49■□□□□ 0.07
RPAIN-202ENST00000381208 TICAM2Q86XR7 235 aa15.49■□□□□ 0.07
RPAIN-202ENST00000381208 RIOX2Q8IUF8 465 aa15.49■□□□□ 0.07
RPAIN-202ENST00000381208 CLEC10AQ8IUN9 316 aa15.49■□□□□ 0.07
RPAIN-202ENST00000381208 NPLOC4Q8TAT6 608 aa15.49■□□□□ 0.07
RPAIN-202ENST00000381208 FLRT1Q9NZU1 646 aa15.49■□□□□ 0.07
RPAIN-202ENST00000381208 NRBP1Q9UHY1 535 aa15.49■□□□□ 0.07
RPAIN-202ENST00000381208 PPP1R9AQ9ULJ8 1098 aa15.49■□□□□ 0.07
RPAIN-202ENST00000381208 IGHA2P01877 340 aa15.49■□□□□ 0.07
RPAIN-202ENST00000381208 MX1P20591 662 aa15.49■□□□□ 0.07
RPAIN-202ENST00000381208 CNGA1P29973 690 aa15.49■□□□□ 0.07
RPAIN-202ENST00000381208 PDE4BQ07343 736 aa15.49■□□□□ 0.07
RPAIN-202ENST00000381208 TSHZ3Q63HK5 1081 aa15.49■□□□□ 0.07
RPAIN-202ENST00000381208 C7orf61Q8IZ16 206 aa15.49■□□□□ 0.07
RPAIN-202ENST00000381208 ARRDC4Q8NCT1 418 aa15.49■□□□□ 0.07
RPAIN-202ENST00000381208 PI4K2BQ8TCG2 481 aa15.49■□□□□ 0.07
RPAIN-202ENST00000381208 FSD1Q9BTV5 496 aa15.49■□□□□ 0.07
RPAIN-202ENST00000381208 RANBP2P49792 3224 aaKnown RBP15.48■□□□□ 0.07
RPAIN-202ENST00000381208 ZNF236Q9UL36 1845 aa15.48■□□□□ 0.07
RPAIN-202ENST00000381208 SMIM22K7EJ46 135 aa15.48■□□□□ 0.07
RPAIN-202ENST00000381208 DNM1LO00429 736 aa15.48■□□□□ 0.07
RPAIN-202ENST00000381208 VWA5AO00534 786 aa15.48■□□□□ 0.07
RPAIN-202ENST00000381208 RAD21O60216 631 aa15.48■□□□□ 0.07
RPAIN-202ENST00000381208 CYBAP13498 195 aa15.48■□□□□ 0.07
RPAIN-202ENST00000381208 CYP2C19P33261 490 aa15.48■□□□□ 0.07
RPAIN-202ENST00000381208 STAT3P40763 770 aa15.48■□□□□ 0.07
RPAIN-202ENST00000381208 KCTD2Q14681 263 aa15.48■□□□□ 0.07
RPAIN-202ENST00000381208 TMEM132BQ14DG7 1078 aa15.48■□□□□ 0.07
RPAIN-202ENST00000381208 IFNL3Q8IZI9 196 aa15.48■□□□□ 0.07
RPAIN-202ENST00000381208 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.48■□□□□ 0.07
RPAIN-202ENST00000381208 NAPBQ9H115 298 aa15.48■□□□□ 0.07
RPAIN-202ENST00000381208 DIS3Q9Y2L1 958 aaKnown RBP15.48■□□□□ 0.07
RPAIN-202ENST00000381208 PFASO15067 1338 aa15.47■□□□□ 0.07
RPAIN-202ENST00000381208 A0A0G2JMZ2 1700 aa15.47■□□□□ 0.07
RPAIN-202ENST00000381208 F5H6K3 240 aa15.47■□□□□ 0.07
RPAIN-202ENST00000381208 M0R2C6 588 aa15.47■□□□□ 0.07
RPAIN-202ENST00000381208 SEPT4O43236 478 aa15.47■□□□□ 0.07
RPAIN-202ENST00000381208 KLRC3Q07444 240 aa15.47■□□□□ 0.07
RPAIN-202ENST00000381208 HDAC1Q13547 482 aaPredicted RBP15.47■□□□□ 0.07
RPAIN-202ENST00000381208 ZMYM1Q5SVZ6 1142 aa15.47■□□□□ 0.07
RPAIN-202ENST00000381208 FAM83BQ5T0W9 1011 aa15.47■□□□□ 0.07
RPAIN-202ENST00000381208 PRPF38AQ8NAV1 312 aaKnown RBP15.47■□□□□ 0.07
RPAIN-202ENST00000381208 MKL1Q969V6 931 aa15.47■□□□□ 0.07
RPAIN-202ENST00000381208 MMP19Q99542 508 aa15.47■□□□□ 0.07
RPAIN-202ENST00000381208 GDF15Q99988 308 aa15.47■□□□□ 0.07
RPAIN-202ENST00000381208 SLF1Q9BQI6 1058 aa15.47■□□□□ 0.07
RPAIN-202ENST00000381208 EPB41L4AQ9HCS5 686 aaPredicted RBP15.47■□□□□ 0.07
RPAIN-202ENST00000381208 RLFQ13129 1914 aa15.46■□□□□ 0.07
RPAIN-202ENST00000381208 IGKV6D-41A0A0C4DH26 115 aa15.46■□□□□ 0.07
RPAIN-202ENST00000381208 COBLO75128 1261 aa15.46■□□□□ 0.07
RPAIN-202ENST00000381208 TTLL1O95922 423 aa15.46■□□□□ 0.07
RPAIN-202ENST00000381208 FDX1P10109 184 aa15.46■□□□□ 0.07
RPAIN-202ENST00000381208 MAML3Q96JK9 1138 aa15.46■□□□□ 0.07
RPAIN-202ENST00000381208 TEX13BQ9BXU2 312 aa15.46■□□□□ 0.07
RPAIN-202ENST00000381208 FBXO28Q9NVF7 368 aa15.46■□□□□ 0.07
RPAIN-202ENST00000381208 STAP2Q9UGK3 403 aa15.46■□□□□ 0.07
RPAIN-202ENST00000381208 ZNF214Q9UL59 606 aaPredicted RBP15.46■□□□□ 0.07
RPAIN-202ENST00000381208 CTDP1Q9Y5B0 961 aaPredicted RBP15.46■□□□□ 0.07
RPAIN-202ENST00000381208 ATP2A1O14983 1001 aa15.45■□□□□ 0.06
RPAIN-202ENST00000381208 NDUFB10O96000 172 aa15.45■□□□□ 0.06
RPAIN-202ENST00000381208 TSPY3P0CV98 308 aa15.45■□□□□ 0.06
RPAIN-202ENST00000381208 TSPY8P0CW00 308 aa15.45■□□□□ 0.06
RPAIN-202ENST00000381208 ANKRD45Q5TZF3 282 aa15.45■□□□□ 0.06
RPAIN-202ENST00000381208 MSL3Q8N5Y2 521 aaKnown RBP15.45■□□□□ 0.06
RPAIN-202ENST00000381208 GMCL1P1Q8NEA9 526 aa15.45■□□□□ 0.06
RPAIN-202ENST00000381208 NEDD1Q8NHV4 660 aa15.45■□□□□ 0.06
RPAIN-202ENST00000381208 EVI5LQ96CN4 794 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms