RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 OVOS2Q6IE36 1432 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 ALAS1P13196 640 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 ZAP70P43403 619 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 GIMAP6Q6P9H5 292 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 LGR6Q9HBX8 967 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 C1orf112Q9NSG2 853 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 USH1CQ9Y6N9 552 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 MED23Q9ULK4 1368 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 OATP04181 439 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 PDE6AP16499 860 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 RBM6P78332 1123 aaKnown RBP7.93□□□□□ -1.14
CCDC171-201ENST00000380701 MTMR3Q13615 1198 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 USPL1Q5W0Q7 1092 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 C2orf69Q8N8R5 385 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 ATP2A3Q93084 1043 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 IPO11Q9UI26 975 aaKnown RBP7.93□□□□□ -1.14
CCDC171-201ENST00000380701 PER1O15534 1290 aaPredicted RBP7.92□□□□□ -1.14
CCDC171-201ENST00000380701 LTKP29376 864 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 KRT9P35527 623 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 DMP1Q13316 513 aaPredicted RBP7.92□□□□□ -1.14
CCDC171-201ENST00000380701 CNPY4Q8N129 248 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 BBOF1Q8ND07 529 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 CACTINQ8WUQ7 758 aaKnown RBP7.92□□□□□ -1.14
CCDC171-201ENST00000380701 TCEANC2Q96MN5 208 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 LRFN2Q9ULH4 789 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 IGSF1Q8N6C5 1336 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 IQCA1LA6NCM1 817 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 TLR3O15455 904 aaKnown RBP7.92□□□□□ -1.14
CCDC171-201ENST00000380701 ZNF189O75820 626 aaPredicted RBP7.92□□□□□ -1.14
CCDC171-201ENST00000380701 GNAT1P11488 350 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 CHRNDQ07001 517 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 SEPT2Q15019 361 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 CCDC122Q5T0U0 273 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 FYB2Q5VWT5 728 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 GRK7Q8WTQ7 553 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 DNAJC25Q9H1X3 360 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 GDPD2Q9HCC8 539 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 PKD2L1Q9P0L9 805 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 PIM2Q9P1W9 311 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 LCMT1Q9UIC8 334 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 ARHGAP31Q2M1Z3 1444 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 KDM2BQ8NHM5 1336 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 FBLN1P23142 703 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 LONP1P36776 959 aaKnown RBP7.92□□□□□ -1.14
CCDC171-201ENST00000380701 PNMA1Q8ND90 353 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 CCPG1Q9ULG6 757 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 ARAP3Q8WWN8 1544 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 TMEM110-MUSTN1A8MSY1 372 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 USP17L12C9JPN9 530 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 USP17L21D6R901 530 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 TCP10Q12799 353 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 ZYXQ15942 572 aaKnown RBP7.92□□□□□ -1.14
CCDC171-201ENST00000380701 CDC37Q16543 378 aaPredicted RBP7.92□□□□□ -1.14
CCDC171-201ENST00000380701 MIS18BP1Q6P0N0 1132 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 NCAPG2Q86XI2 1143 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 MAP7D3Q8IWC1 876 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 IFNL3Q8IZI9 196 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 MYOCDQ8IZQ8 938 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 FAM167AQ96KS9 214 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 INO80BQ9C086 356 aaPredicted RBP7.92□□□□□ -1.14
CCDC171-201ENST00000380701 DNAI1Q9UI46 699 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 THAP12O43422 761 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 TAF5LO75529 589 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 RPS6KA4O75676 772 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 GCNT3O95395 438 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 OR52Z1P0C646 297 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 SLC12A2P55011 1212 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 ARID5AQ03989 594 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 RUFY4Q6ZNE9 571 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 BAG1Q99933 345 aaPredicted RBP7.92□□□□□ -1.14
CCDC171-201ENST00000380701 CLSTN2Q9H4D0 955 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 SAMD15Q9P1V8 674 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 CTTNBP2NLQ9P2B4 639 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 GINS2Q9Y248 185 aa7.92□□□□□ -1.14
CCDC171-201ENST00000380701 TTLL1O95922 423 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 SCG2P13521 617 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 TNNI1P19237 187 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 PLA2G4DQ86XP0 818 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 SLC7A3Q8WY07 619 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 SLC12A6Q9UHW9 1150 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 SLC8A2Q9UPR5 921 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 TESPA1A2RU30 521 aaPredicted RBP7.91□□□□□ -1.14
CCDC171-201ENST00000380701 TMEM191BP0C7N4 346 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 XRCC5P13010 732 aaKnown RBP7.91□□□□□ -1.14
CCDC171-201ENST00000380701 GRAPQ13588 217 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 PLCB4Q15147 1175 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 CCDC6Q16204 474 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 XKR9Q5GH70 373 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 GRAPLQ8TC17 118 aaPredicted RBP7.91□□□□□ -1.14
CCDC171-201ENST00000380701 TNNQ9UQP3 1299 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 UTP11Q9Y3A2 253 aaKnown RBP7.91□□□□□ -1.14
CCDC171-201ENST00000380701 ZMYM6O95789 1325 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 UNC13AQ9UPW8 1703 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 STAT1P42224 750 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 SFMBT2Q5VUG0 894 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 PLCD3Q8N3E9 789 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 IGSF22Q8N9C0 903 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 PI4KBQ9UBF8 816 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 PCDHA12Q9UN75 941 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 ABCC4O15439 1325 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms