RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 HDAC7Q8WUI4 952 aa7.35□□□□□ -1.23
RIPK1-202ENST00000380409 LRRC59Q96AG4 307 aaKnown RBP7.35□□□□□ -1.23
RIPK1-202ENST00000380409 TFIP11Q9UBB9 837 aaKnown RBP7.35□□□□□ -1.23
RIPK1-202ENST00000380409 PNMA2Q9UL42 364 aa7.35□□□□□ -1.23
RIPK1-202ENST00000380409 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.35□□□□□ -1.23
RIPK1-202ENST00000380409 SLC12A4Q9UP95 1085 aa7.35□□□□□ -1.23
RIPK1-202ENST00000380409 ADGRG1Q9Y653 693 aa7.35□□□□□ -1.23
RIPK1-202ENST00000380409 ACEP12821 1306 aa7.35□□□□□ -1.23
RIPK1-202ENST00000380409 GUCY1B3Q02153 619 aa7.35□□□□□ -1.23
RIPK1-202ENST00000380409 ZNF572Q7Z3I7 529 aaPredicted RBP7.35□□□□□ -1.23
RIPK1-202ENST00000380409 PI4K2BQ8TCG2 481 aa7.35□□□□□ -1.23
RIPK1-202ENST00000380409 C17orf50Q8WW18 174 aa7.35□□□□□ -1.23
RIPK1-202ENST00000380409 CCT6BQ92526 530 aa7.35□□□□□ -1.23
RIPK1-202ENST00000380409 P3H4Q92791 437 aa7.35□□□□□ -1.23
RIPK1-202ENST00000380409 ANKRD27Q96NW4 1050 aa7.35□□□□□ -1.23
RIPK1-202ENST00000380409 PIDD1Q9HB75 910 aa7.35□□□□□ -1.23
RIPK1-202ENST00000380409 KIAA1468Q9P260 1216 aa7.35□□□□□ -1.23
RIPK1-202ENST00000380409 CYP46A1Q9Y6A2 500 aa7.35□□□□□ -1.23
RIPK1-202ENST00000380409 USP42Q9H9J4 1324 aaKnown RBP7.35□□□□□ -1.23
RIPK1-202ENST00000380409 MYH2Q9UKX2 1941 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 PI4KAP2A4QPH2 592 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 VIMP08670 466 aaKnown RBP7.34□□□□□ -1.23
RIPK1-202ENST00000380409 CPA1P15085 419 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 PAX3P23760 479 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 TNFRSF8P28908 595 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 NLRP12P59046 1061 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 PHEXP78562 749 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 PDCLQ13371 301 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 LBRQ14739 615 aaKnown RBP7.34□□□□□ -1.23
RIPK1-202ENST00000380409 CCNI2Q6ZMN8 369 aaPredicted RBP7.34□□□□□ -1.23
RIPK1-202ENST00000380409 PI4KAP1Q8N8J0 262 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 OCEL1Q9H607 264 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 ZSWIM4Q9H7M6 989 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.34□□□□□ -1.23
RIPK1-202ENST00000380409 ARHGEF10O15013 1369 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 PIK3C2AO00443 1686 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 SYNRGQ9UMZ2 1314 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 PXDNLA1KZ92 1463 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 NPM3O75607 178 aaKnown RBP7.34□□□□□ -1.23
RIPK1-202ENST00000380409 ANP32DO95626 131 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 MCM3P25205 808 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 TUBP50607 506 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 NLRP14Q86W24 1093 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 NCSTNQ92542 709 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 TMEM165Q9HC07 324 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 TUBE1Q9UJT0 475 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 SUGT1Q9Y2Z0 365 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 CHD4Q14839 1912 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 CTAGE15A4D2H0 777 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 CTAGE8P0CG41 777 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 MYO1EQ12965 1108 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 ZNF268Q14587 947 aaPredicted RBP7.34□□□□□ -1.23
RIPK1-202ENST00000380409 CCDC57Q2TAC2 916 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 POTEAQ6S8J7 498 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 G2E3Q7L622 706 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 RALYLQ86SE5 291 aaKnown RBP7.34□□□□□ -1.23
RIPK1-202ENST00000380409 CTAGE6Q86UF2 777 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 CTAGE4Q8IX94 777 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 CCT8L2Q96SF2 557 aa7.34□□□□□ -1.23
RIPK1-202ENST00000380409 QTRT2Q9H974 415 aaKnown RBP7.34□□□□□ -1.23
RIPK1-202ENST00000380409 CWC25Q9NXE8 425 aaPredicted RBP7.34□□□□□ -1.23
RIPK1-202ENST00000380409 ATP5J2-PTCD1G3V325 749 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 SLC27A2O14975 620 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 PPP1R37O75864 691 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 RAD9BQ6WBX8 426 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 CCDC73Q6ZRK6 1079 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 PPP1R42Q7Z4L9 355 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 RAB11FIP4Q86YS3 637 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 CD302Q8IX05 232 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 ARL8AQ96BM9 186 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 CCDC114Q96M63 670 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 PHACTR1Q9C0D0 580 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 USP21Q9UK80 565 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 DPPA5A6NC42 116 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 F8VZ95 297 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 PAEPP09466 180 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 CNGA1P29973 690 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 PDE6BP35913 854 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 CTCFP49711 727 aaPredicted RBP7.33□□□□□ -1.24
RIPK1-202ENST00000380409 TMED1Q13445 227 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 CUL3Q13618 768 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 MTF1Q14872 753 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 NECTIN1Q15223 517 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 KIAA0753Q2KHM9 967 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 CCDC38Q502W7 563 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 FOXB2Q5VYV0 432 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 TEX9Q8N6V9 391 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 KCNV2Q8TDN2 545 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 CYFIP2Q96F07 1278 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 RNPC3Q96LT9 517 aaKnown RBP7.33□□□□□ -1.24
RIPK1-202ENST00000380409 PANX2Q96RD6 677 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 CDC5LQ99459 802 aaKnown RBP7.33□□□□□ -1.24
RIPK1-202ENST00000380409 TSC22D3Q99576 134 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 CEP126Q9P2H0 1117 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 A0A1W2PQ27 194 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 A0A1W2PQ64 194 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 A0A1W2PQD8 194 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 ABL1P00519 1130 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 ZNF18P17022 549 aa7.33□□□□□ -1.24
RIPK1-202ENST00000380409 ALDH3A1P30838 453 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms