RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 GINM1Q9NU53 330 aa8.95□□□□□ -0.98
CDKL5-202ENST00000379996 CTIFO43310 598 aaKnown RBP8.95□□□□□ -0.98
CDKL5-202ENST00000379996 PDIA3P30101 505 aaKnown RBP8.95□□□□□ -0.98
CDKL5-202ENST00000379996 TDO2P48775 406 aa8.95□□□□□ -0.98
CDKL5-202ENST00000379996 ANTXR2P58335 489 aa8.95□□□□□ -0.98
CDKL5-202ENST00000379996 TNFAIP1Q13829 316 aa8.95□□□□□ -0.98
CDKL5-202ENST00000379996 LUZP1Q86V48 1076 aa8.95□□□□□ -0.98
CDKL5-202ENST00000379996 AMOTL1Q8IY63 956 aa8.95□□□□□ -0.98
CDKL5-202ENST00000379996 SDR42E1Q8WUS8 393 aa8.95□□□□□ -0.98
CDKL5-202ENST00000379996 SPATA32Q96LK8 384 aa8.95□□□□□ -0.98
CDKL5-202ENST00000379996 ZNF287Q9HBT7 754 aa8.95□□□□□ -0.98
CDKL5-202ENST00000379996 DDX4Q9NQI0 724 aaKnown RBP8.95□□□□□ -0.98
CDKL5-202ENST00000379996 SYNPO2Q9UMS6 1093 aa8.95□□□□□ -0.98
CDKL5-202ENST00000379996 IQCA1LA6NCM1 817 aa8.94□□□□□ -0.98
CDKL5-202ENST00000379996 USP5P45974 858 aa8.94□□□□□ -0.98
CDKL5-202ENST00000379996 RCAN1P53805 252 aa8.94□□□□□ -0.98
CDKL5-202ENST00000379996 TGFBRAP1Q8WUH2 860 aa8.94□□□□□ -0.98
CDKL5-202ENST00000379996 ANKS1AQ92625 1134 aa8.94□□□□□ -0.98
CDKL5-202ENST00000379996 KCND1Q9NSA2 647 aa8.94□□□□□ -0.98
CDKL5-202ENST00000379996 F8W031 263 aaPredicted RBP8.94□□□□□ -0.98
CDKL5-202ENST00000379996 ATMINO43313 823 aaPredicted RBP8.94□□□□□ -0.98
CDKL5-202ENST00000379996 TNNI2P48788 182 aa8.94□□□□□ -0.98
CDKL5-202ENST00000379996 ANO6Q4KMQ2 910 aa8.94□□□□□ -0.98
CDKL5-202ENST00000379996 ATL3Q6DD88 541 aa8.94□□□□□ -0.98
CDKL5-202ENST00000379996 TATDN1Q6P1N9 297 aa8.94□□□□□ -0.98
CDKL5-202ENST00000379996 TBC1D10CQ8IV04 446 aa8.94□□□□□ -0.98
CDKL5-202ENST00000379996 FOXP4Q8IVH2 680 aaPredicted RBP8.94□□□□□ -0.98
CDKL5-202ENST00000379996 DHX40Q8IX18 779 aaKnown RBP8.94□□□□□ -0.98
CDKL5-202ENST00000379996 FTOQ9C0B1 505 aaKnown RBP eCLIP8.94□□□□□ -0.98
CDKL5-202ENST00000379996 TMOD2Q9NZR1 351 aa8.94□□□□□ -0.98
CDKL5-202ENST00000379996 HERC5Q9UII4 1024 aaKnown RBP8.94□□□□□ -0.98
CDKL5-202ENST00000379996 MYH6P13533 1939 aa8.94□□□□□ -0.98
CDKL5-202ENST00000379996 PTPDC1A2A3K4 754 aa8.93□□□□□ -0.98
CDKL5-202ENST00000379996 ZNF75DP51815 510 aa8.93□□□□□ -0.98
CDKL5-202ENST00000379996 STK3Q13188 491 aa8.93□□□□□ -0.98
CDKL5-202ENST00000379996 CCDC178Q5BJE1 867 aa8.93□□□□□ -0.98
CDKL5-202ENST00000379996 NCOA7Q8NI08 942 aa8.93□□□□□ -0.98
CDKL5-202ENST00000379996 HACL1Q9UJ83 578 aa8.93□□□□□ -0.98
CDKL5-202ENST00000379996 PHIPQ8WWQ0 1821 aa8.93□□□□□ -0.98
CDKL5-202ENST00000379996 POTECB2RU33 542 aa8.93□□□□□ -0.98
CDKL5-202ENST00000379996 LMOD1P29536 600 aaPredicted RBP8.93□□□□□ -0.98
CDKL5-202ENST00000379996 GLMNQ92990 594 aa8.93□□□□□ -0.98
CDKL5-202ENST00000379996 HOOK2Q96ED9 719 aa8.93□□□□□ -0.98
CDKL5-202ENST00000379996 TFIP11Q9UBB9 837 aaKnown RBP8.93□□□□□ -0.98
CDKL5-202ENST00000379996 PI4KBQ9UBF8 816 aa8.93□□□□□ -0.98
CDKL5-202ENST00000379996 TACC3Q9Y6A5 838 aa8.93□□□□□ -0.98
CDKL5-202ENST00000379996 OTOFQ9HC10 1997 aa8.93□□□□□ -0.98
CDKL5-202ENST00000379996 MOXD2PA6NHM9 499 aa8.93□□□□□ -0.98
CDKL5-202ENST00000379996 USP17L12C9JPN9 530 aa8.93□□□□□ -0.98
CDKL5-202ENST00000379996 USP17L21D6R901 530 aa8.93□□□□□ -0.98
CDKL5-202ENST00000379996 APOBRQ0VD83 1088 aa8.93□□□□□ -0.98
CDKL5-202ENST00000379996 C11orf57Q6ZUT1 292 aaPredicted RBP8.93□□□□□ -0.98
CDKL5-202ENST00000379996 SH3BP5LQ7L8J4 393 aa8.93□□□□□ -0.98
CDKL5-202ENST00000379996 PNMA8AQ86V59 439 aaPredicted RBP8.93□□□□□ -0.98
CDKL5-202ENST00000379996 DDX11Q96FC9 970 aa8.93□□□□□ -0.98
CDKL5-202ENST00000379996 TMEM87BQ96K49 555 aa8.93□□□□□ -0.98
CDKL5-202ENST00000379996 TEPSINQ96N21 525 aa8.93□□□□□ -0.98
CDKL5-202ENST00000379996 MCM9Q9NXL9 1143 aa8.93□□□□□ -0.98
CDKL5-202ENST00000379996 PCDHAC2Q9Y5I4 1007 aa8.93□□□□□ -0.98
CDKL5-202ENST00000379996 TPM3P06753 285 aa8.92□□□□□ -0.98
CDKL5-202ENST00000379996 PDE4BQ07343 736 aa8.92□□□□□ -0.98
CDKL5-202ENST00000379996 NFIAQ12857 509 aa8.92□□□□□ -0.98
CDKL5-202ENST00000379996 CAMK4Q16566 473 aa8.92□□□□□ -0.98
CDKL5-202ENST00000379996 CCDC144BQ3MJ40 725 aa8.92□□□□□ -0.98
CDKL5-202ENST00000379996 PPP4R3BQ5MIZ7 849 aa8.92□□□□□ -0.98
CDKL5-202ENST00000379996 CCDC144CPQ8IYA2 1237 aa8.92□□□□□ -0.98
CDKL5-202ENST00000379996 FMR1NBQ8N0W7 255 aaPredicted RBP8.92□□□□□ -0.98
CDKL5-202ENST00000379996 ANKRD7Q92527 254 aa8.92□□□□□ -0.98
CDKL5-202ENST00000379996 USP28Q96RU2 1077 aa8.92□□□□□ -0.98
CDKL5-202ENST00000379996 LRRC2Q9BYS8 371 aa8.92□□□□□ -0.98
CDKL5-202ENST00000379996 TDRD3Q9H7E2 651 aaKnown RBP8.92□□□□□ -0.98
CDKL5-202ENST00000379996 SSC5DA1L4H1 1573 aa8.92□□□□□ -0.98
CDKL5-202ENST00000379996 IGKV6D-41A0A0C4DH26 115 aa8.92□□□□□ -0.98
CDKL5-202ENST00000379996 UNCXA6NJT0 531 aa8.92□□□□□ -0.98
CDKL5-202ENST00000379996 DDNO94850 711 aaPredicted RBP8.92□□□□□ -0.98
CDKL5-202ENST00000379996 APPP05067 770 aa8.92□□□□□ -0.98
CDKL5-202ENST00000379996 HLA-DOAP06340 250 aa8.92□□□□□ -0.98
CDKL5-202ENST00000379996 MFSD6Q6ZSS7 791 aa8.92□□□□□ -0.98
CDKL5-202ENST00000379996 MAPKAPK5Q8IW41 473 aa8.92□□□□□ -0.98
CDKL5-202ENST00000379996 SLAIN1Q8ND83 568 aa8.92□□□□□ -0.98
CDKL5-202ENST00000379996 TNMDQ9H2S6 317 aa8.92□□□□□ -0.98
CDKL5-202ENST00000379996 GJA3Q9Y6H8 435 aa8.92□□□□□ -0.98
CDKL5-202ENST00000379996 C19orf67A6NJJ6 358 aa8.92□□□□□ -0.98
CDKL5-202ENST00000379996 HIRAP54198 1017 aaPredicted RBP8.92□□□□□ -0.98
CDKL5-202ENST00000379996 SKIV2LQ15477 1246 aaKnown RBP8.92□□□□□ -0.98
CDKL5-202ENST00000379996 PLSCR2Q9NRY7 297 aa8.92□□□□□ -0.98
CDKL5-202ENST00000379996 SHTN1A0MZ66 631 aa8.91□□□□□ -0.98
CDKL5-202ENST00000379996 CAVIN2O95810 425 aa8.91□□□□□ -0.98
CDKL5-202ENST00000379996 LIFRP42702 1097 aa8.91□□□□□ -0.98
CDKL5-202ENST00000379996 RBM5P52756 815 aaKnown RBP eCLIP8.91□□□□□ -0.98
CDKL5-202ENST00000379996 NBPF9Q3BBW0 867 aa8.91□□□□□ -0.98
CDKL5-202ENST00000379996 SGMS1Q86VZ5 419 aa8.91□□□□□ -0.98
CDKL5-202ENST00000379996 CKAP2LQ8IYA6 745 aa8.91□□□□□ -0.98
CDKL5-202ENST00000379996 TRPM4Q8TD43 1214 aa8.91□□□□□ -0.98
CDKL5-202ENST00000379996 ESR2Q92731 530 aa8.91□□□□□ -0.98
CDKL5-202ENST00000379996 CCDC17Q96LX7 622 aa8.91□□□□□ -0.98
CDKL5-202ENST00000379996 HMX1Q9NP08 348 aaPredicted RBP8.91□□□□□ -0.98
CDKL5-202ENST00000379996 RTEL1Q9NZ71 1219 aa8.91□□□□□ -0.98
CDKL5-202ENST00000379996 NRBP1Q9UHY1 535 aa8.91□□□□□ -0.98
CDKL5-202ENST00000379996 FAM237AA0A1B0GTK4 181 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms