RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 ARID3AQ99856 593 aa16.96■□□□□ 0.31
PRNP-201ENST00000379440 ZNF287Q9HBT7 754 aa16.96■□□□□ 0.31
PRNP-201ENST00000379440 LMOD1P29536 600 aaPredicted RBP16.96■□□□□ 0.31
PRNP-201ENST00000379440 PTGDRQ13258 359 aa16.96■□□□□ 0.31
PRNP-201ENST00000379440 RASGRP4Q8TDF6 673 aa16.96■□□□□ 0.31
PRNP-201ENST00000379440 PARP3Q9Y6F1 533 aa16.96■□□□□ 0.31
PRNP-201ENST00000379440 DDX60LQ5H9U9 1706 aaKnown RBP16.96■□□□□ 0.3
PRNP-201ENST00000379440 ACTN4O43707 911 aaKnown RBP16.95■□□□□ 0.3
PRNP-201ENST00000379440 NT5C2P49902 561 aa16.95■□□□□ 0.3
PRNP-201ENST00000379440 NEDD1Q8NHV4 660 aa16.95■□□□□ 0.3
PRNP-201ENST00000379440 HSD3B7Q9H2F3 369 aa16.95■□□□□ 0.3
PRNP-201ENST00000379440 IFNKQ9P0W0 207 aa16.95■□□□□ 0.3
PRNP-201ENST00000379440 TTF2Q9UNY4 1162 aaKnown RBP16.95■□□□□ 0.3
PRNP-201ENST00000379440 PALM3A6NDB9 673 aaPredicted RBP16.95■□□□□ 0.3
PRNP-201ENST00000379440 SMTNL1A8MU46 457 aa16.95■□□□□ 0.3
PRNP-201ENST00000379440 DYNC1I1O14576 645 aa16.95■□□□□ 0.3
PRNP-201ENST00000379440 SCNN1DP51172 638 aa16.95■□□□□ 0.3
PRNP-201ENST00000379440 DHX58Q96C10 678 aa16.95■□□□□ 0.3
PRNP-201ENST00000379440 XPO4Q9C0E2 1151 aaKnown RBP16.95■□□□□ 0.3
PRNP-201ENST00000379440 VWA3AA6NCI4 1184 aa16.94■□□□□ 0.3
PRNP-201ENST00000379440 SMC2O95347 1197 aa16.94■□□□□ 0.3
PRNP-201ENST00000379440 ATP1A3P13637 1013 aa16.94■□□□□ 0.3
PRNP-201ENST00000379440 ALDH1B1P30837 517 aa16.94■□□□□ 0.3
PRNP-201ENST00000379440 MCM7P33993 719 aa16.94■□□□□ 0.3
PRNP-201ENST00000379440 PDE6BP35913 854 aa16.94■□□□□ 0.3
PRNP-201ENST00000379440 ELOA2Q8IYF1 753 aaPredicted RBP16.94■□□□□ 0.3
PRNP-201ENST00000379440 BLIDQ8IZY5 108 aa16.94■□□□□ 0.3
PRNP-201ENST00000379440 SYMPKQ92797 1274 aaKnown RBP16.94■□□□□ 0.3
PRNP-201ENST00000379440 ZNF622Q969S3 477 aaKnown RBP eCLIP16.94■□□□□ 0.3
PRNP-201ENST00000379440 CEP95Q96GE4 821 aa16.94■□□□□ 0.3
PRNP-201ENST00000379440 MAN1B1Q9UKM7 699 aa16.94■□□□□ 0.3
PRNP-201ENST00000379440 GNAQP50148 359 aa16.94■□□□□ 0.3
PRNP-201ENST00000379440 WWC2Q6AWC2 1192 aa16.94■□□□□ 0.3
PRNP-201ENST00000379440 DDX4Q9NQI0 724 aaKnown RBP16.94■□□□□ 0.3
PRNP-201ENST00000379440 KCNQ5Q9NR82 932 aa16.94■□□□□ 0.3
PRNP-201ENST00000379440 HOOK1Q9UJC3 728 aaKnown RBP16.94■□□□□ 0.3
PRNP-201ENST00000379440 MYH1P12882 1939 aa16.94■□□□□ 0.3
PRNP-201ENST00000379440 KLRF2D3W0D1 207 aa16.93■□□□□ 0.3
PRNP-201ENST00000379440 IKBKBO14920 756 aa16.93■□□□□ 0.3
PRNP-201ENST00000379440 ATP2C1P98194 919 aaPredicted RBP16.93■□□□□ 0.3
PRNP-201ENST00000379440 ZNF772Q68DY9 489 aaPredicted RBP16.93■□□□□ 0.3
PRNP-201ENST00000379440 USP17L2Q6R6M4 530 aa16.93■□□□□ 0.3
PRNP-201ENST00000379440 HEATR3Q7Z4Q2 680 aa16.93■□□□□ 0.3
PRNP-201ENST00000379440 LRRC8AQ8IWT6 810 aa16.93■□□□□ 0.3
PRNP-201ENST00000379440 MASTLQ96GX5 879 aa16.93■□□□□ 0.3
PRNP-201ENST00000379440 GOLGB1Q14789 3259 aaKnown RBP16.93■□□□□ 0.3
PRNP-201ENST00000379440 HMGB2P26583 209 aaKnown RBP16.93■□□□□ 0.3
PRNP-201ENST00000379440 FERMT2Q96AC1 680 aa16.93■□□□□ 0.3
PRNP-201ENST00000379440 PCDHA4Q9UN74 947 aa16.93■□□□□ 0.3
PRNP-201ENST00000379440 MORC2Q9Y6X9 1032 aaPredicted RBP16.93■□□□□ 0.3
PRNP-201ENST00000379440 NRXN2Q9P2S2 1712 aa16.93■□□□□ 0.3
PRNP-201ENST00000379440 UQCRHLA0A096LP55 91 aa16.93■□□□□ 0.3
PRNP-201ENST00000379440 BMP15O95972 392 aa16.93■□□□□ 0.3
PRNP-201ENST00000379440 UQCRHP07919 91 aa16.93■□□□□ 0.3
PRNP-201ENST00000379440 CALML3P27482 149 aa16.93■□□□□ 0.3
PRNP-201ENST00000379440 SARSP49591 514 aaKnown RBP16.93■□□□□ 0.3
PRNP-201ENST00000379440 TPM4P67936 248 aa16.93■□□□□ 0.3
PRNP-201ENST00000379440 G3V3G9 751 aa16.92■□□□□ 0.3
PRNP-201ENST00000379440 KCNA4P22459 653 aa16.92■□□□□ 0.3
PRNP-201ENST00000379440 CASP1P29466 404 aa16.92■□□□□ 0.3
PRNP-201ENST00000379440 AFMP43652 599 aa16.92■□□□□ 0.3
PRNP-201ENST00000379440 MYL5Q02045 173 aa16.92■□□□□ 0.3
PRNP-201ENST00000379440 IL17AQ16552 155 aa16.92■□□□□ 0.3
PRNP-201ENST00000379440 DCAF8Q5TAQ9 597 aa16.92■□□□□ 0.3
PRNP-201ENST00000379440 SMARCE1Q969G3 411 aa16.92■□□□□ 0.3
PRNP-201ENST00000379440 DBNDD1Q9H9R9 158 aa16.92■□□□□ 0.3
PRNP-201ENST00000379440 SH3GLB2Q9NR46 395 aa16.92■□□□□ 0.3
PRNP-201ENST00000379440 USP40Q9NVE5 1235 aa16.92■□□□□ 0.3
PRNP-201ENST00000379440 ZNF219Q9P2Y4 722 aaPredicted RBP16.92■□□□□ 0.3
PRNP-201ENST00000379440 NT5DC1Q5TFE4 455 aa16.92■□□□□ 0.3
PRNP-201ENST00000379440 STXBP3O00186 592 aa16.91■□□□□ 0.3
PRNP-201ENST00000379440 FANCCQ00597 558 aa16.91■□□□□ 0.3
PRNP-201ENST00000379440 FLAD1Q8NFF5 587 aa16.91■□□□□ 0.3
PRNP-201ENST00000379440 VAT1LQ9HCJ6 419 aa16.91■□□□□ 0.3
PRNP-201ENST00000379440 FANCLQ9NW38 375 aa16.91■□□□□ 0.3
PRNP-201ENST00000379440 COL11A2P13942 1736 aaPredicted RBP16.91■□□□□ 0.3
PRNP-201ENST00000379440 M0R2N6 131 aa16.91■□□□□ 0.3
PRNP-201ENST00000379440 PARP1P09874 1014 aaKnown RBP16.91■□□□□ 0.3
PRNP-201ENST00000379440 TRAPPC10P48553 1259 aa16.91■□□□□ 0.3
PRNP-201ENST00000379440 HOMER1Q86YM7 354 aa16.91■□□□□ 0.3
PRNP-201ENST00000379440 CLEC10AQ8IUN9 316 aa16.91■□□□□ 0.3
PRNP-201ENST00000379440 TMX4Q9H1E5 349 aaPredicted RBP16.91■□□□□ 0.3
PRNP-201ENST00000379440 BARHL2Q9NY43 387 aa16.91■□□□□ 0.3
PRNP-201ENST00000379440 PCDHA6Q9UN73 950 aa16.91■□□□□ 0.3
PRNP-201ENST00000379440 SUGT1Q9Y2Z0 365 aa16.91■□□□□ 0.3
PRNP-201ENST00000379440 PCDHA8Q9Y5H6 950 aa16.91■□□□□ 0.3
PRNP-201ENST00000379440 SLURP2P0DP57 97 aa16.9■□□□□ 0.3
PRNP-201ENST00000379440 TOP1P11387 765 aaKnown RBP16.9■□□□□ 0.3
PRNP-201ENST00000379440 EIF6P56537 245 aaKnown RBP16.9■□□□□ 0.3
PRNP-201ENST00000379440 MORC3Q14149 939 aa16.9■□□□□ 0.3
PRNP-201ENST00000379440 HSP90AA4PQ58FG1 418 aa16.9■□□□□ 0.3
PRNP-201ENST00000379440 KANK3Q6NY19 840 aa16.9■□□□□ 0.3
PRNP-201ENST00000379440 DPF2Q92785 391 aa16.9■□□□□ 0.3
PRNP-201ENST00000379440 USP17L5A8MUK1 530 aa16.9■□□□□ 0.3
PRNP-201ENST00000379440 SLFN14P0C7P3 912 aa16.9■□□□□ 0.3
PRNP-201ENST00000379440 AKR1B1P15121 316 aa16.9■□□□□ 0.3
PRNP-201ENST00000379440 GABPAQ06546 454 aa16.9■□□□□ 0.3
PRNP-201ENST00000379440 TMC6Q7Z403 805 aa16.9■□□□□ 0.3
PRNP-201ENST00000379440 C2CD5Q86YS7 1000 aa16.9■□□□□ 0.3
PRNP-201ENST00000379440 STAMQ92783 540 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms