RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 YY1P25490 414 aa12.09□□□□□ -0.47
LINC00654-201ENST00000379053 MNAT1P51948 309 aa12.09□□□□□ -0.47
LINC00654-201ENST00000379053 ERFEQ4G0M1 354 aa12.09□□□□□ -0.47
LINC00654-201ENST00000379053 SND1Q7KZF4 910 aaKnown RBP eCLIP12.09□□□□□ -0.47
LINC00654-201ENST00000379053 KRT26Q7Z3Y9 468 aa12.09□□□□□ -0.47
LINC00654-201ENST00000379053 GPIHBP1Q8IV16 184 aa12.09□□□□□ -0.47
LINC00654-201ENST00000379053 HESX1Q9UBX0 185 aa12.09□□□□□ -0.47
LINC00654-201ENST00000379053 PSDA5PKW4 1024 aaPredicted RBP12.09□□□□□ -0.47
LINC00654-201ENST00000379053 BBOX1O75936 387 aa12.09□□□□□ -0.47
LINC00654-201ENST00000379053 RHOXF2BP0C7M4 288 aa12.09□□□□□ -0.47
LINC00654-201ENST00000379053 CDC37L1Q7L3B6 337 aa12.09□□□□□ -0.47
LINC00654-201ENST00000379053 RHOXF2Q9BQY4 288 aa12.09□□□□□ -0.47
LINC00654-201ENST00000379053 ZFYVE16Q7Z3T8 1539 aa12.09□□□□□ -0.47
LINC00654-201ENST00000379053 K7ENM7 598 aa12.09□□□□□ -0.47
LINC00654-201ENST00000379053 MYO1AQ9UBC5 1043 aa12.09□□□□□ -0.47
LINC00654-201ENST00000379053 MKRN1Q9UHC7 482 aaKnown RBP12.09□□□□□ -0.47
LINC00654-201ENST00000379053 ZBTB1Q9Y2K1 713 aa12.09□□□□□ -0.47
LINC00654-201ENST00000379053 ERBB4Q15303 1308 aa12.09□□□□□ -0.47
LINC00654-201ENST00000379053 ACTN4O43707 911 aaKnown RBP12.09□□□□□ -0.47
LINC00654-201ENST00000379053 TMEM191BP0C7N4 346 aa12.09□□□□□ -0.47
LINC00654-201ENST00000379053 CLCN1P35523 988 aa12.09□□□□□ -0.47
LINC00654-201ENST00000379053 IL6STP40189 918 aaPredicted RBP12.09□□□□□ -0.47
LINC00654-201ENST00000379053 BSPRYQ5W0U4 402 aa12.09□□□□□ -0.47
LINC00654-201ENST00000379053 SLFN12Q8IYM2 578 aa12.09□□□□□ -0.47
LINC00654-201ENST00000379053 GREM2Q9H772 168 aa12.09□□□□□ -0.47
LINC00654-201ENST00000379053 ADD3Q9UEY8 706 aaKnown RBP12.09□□□□□ -0.47
LINC00654-201ENST00000379053 PCDHA12Q9UN75 941 aa12.09□□□□□ -0.47
LINC00654-201ENST00000379053 ATP7AQ04656 1500 aa12.09□□□□□ -0.47
LINC00654-201ENST00000379053 UBXN2AP68543 259 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 TFDP1Q14186 410 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 STAMQ92783 540 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 PRIMPOLQ96LW4 560 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 SEC62Q99442 399 aaKnown RBP12.08□□□□□ -0.48
LINC00654-201ENST00000379053 CACYBPQ9HB71 228 aaKnown RBP12.08□□□□□ -0.48
LINC00654-201ENST00000379053 ASIC3Q9UHC3 531 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 NEO1Q92859 1461 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 RNASELQ05823 741 aaKnown RBP12.08□□□□□ -0.48
LINC00654-201ENST00000379053 KLHL30Q0D2K2 578 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 KIAA1841Q6NSI8 718 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 SCYL2Q6P3W7 929 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 EDC3Q96F86 508 aaKnown RBP12.08□□□□□ -0.48
LINC00654-201ENST00000379053 CCDC17Q96LX7 622 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 NUP58Q9BVL2 599 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 AKT3Q9Y243 479 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 SLC12A2P55011 1212 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 TRIM50Q86XT4 487 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 BLIDQ8IZY5 108 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 VPS52Q8N1B4 723 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 AFAP1L2Q8N4X5 818 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 FAM184BQ9ULE4 1060 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 PCDHA1Q9Y5I3 950 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 CIAPIN1Q6FI81 312 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 C4orf50Q6ZRC1 276 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 CMTR1Q8N1G2 835 aaKnown RBP12.08□□□□□ -0.48
LINC00654-201ENST00000379053 BLZF1Q9H2G9 400 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 DMP1Q13316 513 aaPredicted RBP12.08□□□□□ -0.48
LINC00654-201ENST00000379053 NOLC1Q14978 699 aaKnown RBP eCLIP12.08□□□□□ -0.48
LINC00654-201ENST00000379053 SRGAP1Q7Z6B7 1085 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 MLKLQ8NB16 471 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 TAB2Q9NYJ8 693 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 ANKFY1Q9P2R3 1169 aa12.08□□□□□ -0.48
LINC00654-201ENST00000379053 ITKQ08881 620 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 CYP26C1Q6V0L0 522 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 SEPT14Q6ZU15 432 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 IL17REQ8NFR9 667 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 TNKSO95271 1327 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 SETDB1Q15047 1291 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 LRRC24Q50LG9 513 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 CPLX4Q7Z7G2 160 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 TTLL6Q8N841 843 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 KCNH4Q9UQ05 1017 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 KDRP35968 1356 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 TECP42680 631 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 GTF2A1P52655 376 aaPredicted RBP12.07□□□□□ -0.48
LINC00654-201ENST00000379053 ARFGAP2Q8N6H7 521 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 NELFBQ8WX92 580 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 ZNF335Q9H4Z2 1342 aaPredicted RBP12.07□□□□□ -0.48
LINC00654-201ENST00000379053 XPOTO43592 962 aaKnown RBP12.07□□□□□ -0.48
LINC00654-201ENST00000379053 ATP5DP30049 168 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 KIF11P52732 1056 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 PLCB4Q15147 1175 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 CCDC110Q8TBZ0 833 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 DDX25Q9UHL0 483 aaKnown RBP12.07□□□□□ -0.48
LINC00654-201ENST00000379053 PNMA3Q9UL41 463 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 TLR3O15455 904 aaKnown RBP12.07□□□□□ -0.48
LINC00654-201ENST00000379053 KRT81Q14533 505 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 DNAJC21Q5F1R6 531 aaKnown RBP12.07□□□□□ -0.48
LINC00654-201ENST00000379053 FAM178BQ8IXR5 827 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 CCDC89Q8N998 374 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 RETREG2Q8NC44 543 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 ZFP91Q96JP5 570 aaPredicted RBP12.07□□□□□ -0.48
LINC00654-201ENST00000379053 C1orf112Q9NSG2 853 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 LARSQ9P2J5 1176 aaKnown RBP12.07□□□□□ -0.48
LINC00654-201ENST00000379053 PARP2Q9UGN5 583 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 TRIM35Q9UPQ4 493 aa12.07□□□□□ -0.48
LINC00654-201ENST00000379053 GDF11O95390 407 aa12.06□□□□□ -0.48
LINC00654-201ENST00000379053 TUBB4BP68371 445 aa12.06□□□□□ -0.48
LINC00654-201ENST00000379053 TAOK1Q7L7X3 1001 aa12.06□□□□□ -0.48
LINC00654-201ENST00000379053 KRT222Q8N1A0 295 aa12.06□□□□□ -0.48
LINC00654-201ENST00000379053 AMNQ9BXJ7 453 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms