RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 LAMB4A4D0S4 1761 aa7.56□□□□□ -1.2
CDKAL1-202ENST00000378610 PHRF1Q9P1Y6 1649 aaKnown RBP7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 DIP2BQ9P265 1576 aa7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 TSPAN6O43657 245 aa7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 ZEB2O60315 1214 aa7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 ERLIN2O94905 339 aa7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 YEATS4O95619 227 aa7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 APPP05067 770 aa7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 FDX1P10109 184 aa7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 INHBEP58166 350 aa7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 VPS72Q15906 364 aa7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 PPP4R4Q6NUP7 873 aa7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 RELTQ969Z4 430 aa7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 ZNF396Q96N95 335 aaPredicted RBP7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 FTOQ9C0B1 505 aaKnown RBP eCLIP7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 FAM204AQ9H8W3 233 aa7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 ERLIN1O75477 346 aa7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 KRT18P05783 430 aaKnown RBP7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 LDHCP07864 332 aa7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 ATP1A3P13637 1013 aa7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 VSNL1P62760 191 aa7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 KRT32Q14532 448 aa7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 NFE2Q16621 373 aaPredicted RBP7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 MAGEC3Q8TD91 643 aa7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 MS4A3Q96HJ5 214 aa7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 PURBQ96QR8 312 aaKnown RBP7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 PANX2Q96RD6 677 aa7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 SH3GL2Q99962 352 aa7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 GBP3Q9H0R5 595 aa7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 MRPL44Q9H9J2 332 aaKnown RBP7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 NEUROD4Q9HD90 331 aa7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 ENAMQ9NRM1 1142 aa7.55□□□□□ -1.2
CDKAL1-202ENST00000378610 ESYT3A0FGR9 886 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 CCDC85CA6NKD9 419 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 TMCO5BA8MYB1 307 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 AGPSO00116 658 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 CAND2O75155 1236 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 UBTFL1P0CB47 393 aaPredicted RBP7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 EXOSC10Q01780 885 aaKnown RBP7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 NMIQ13287 307 aaPredicted RBP7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 RASA3Q14644 834 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 PREPLQ4J6C6 727 aaPredicted RBP7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 NME9Q86XW9 330 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 FSIP1Q8NA03 581 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 MKL1Q969V6 931 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 MIEF2Q96C03 454 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 BAG1Q99933 345 aaPredicted RBP7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 ZHX3Q9H4I2 956 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 CNTN3Q9P232 1028 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 HPCAL4Q9UM19 191 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 FER1L4A9Z1Z3 1794 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 PTPRUQ92729 1446 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 UTYO14607 1347 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 RTN2O75298 545 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 TAF5LO75529 589 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 CALRP27797 417 aaKnown RBP7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 NOS2P35228 1153 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 PBX1P40424 430 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 USP8P40818 1118 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 NT5DC1Q5TFE4 455 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 SLC4A10Q6U841 1118 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 RASGRP2Q7LDG7 609 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 KIAA0907Q7Z7F0 614 aaPredicted RBP7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 SUGCTQ9HAC7 445 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 GGA2Q9UJY4 613 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 MYH8P13535 1937 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 A0A0D9SFI3 127 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 TARSL2A2RTX5 802 aaKnown RBP7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 RNF40O75150 1001 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 IGHA2P01877 340 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 POLD1P28340 1107 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 GNG11P61952 73 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 MYL5Q02045 173 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 PLCB4Q15147 1175 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 ZRSR2Q15696 482 aaKnown RBP7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 WHAMMP3Q1A5X7 153 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 BEND3Q5T5X7 828 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 NUTM2GQ5VZR2 741 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 PAF1Q8N7H5 531 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 JMYQ8N9B5 988 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 AFAP1L1Q8TED9 768 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 FAM227BQ96M60 508 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 NAA15Q9BXJ9 866 aaKnown RBP7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 PRKD2Q9BZL6 878 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 C19orf44Q9H6X5 657 aa7.54□□□□□ -1.2
CDKAL1-202ENST00000378610 RCCD1A6NED2 376 aa7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 TMEM232C9JQI7 657 aa7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 SURF6O75683 361 aaKnown RBP7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 CMA1P23946 247 aa7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 MAN1A1P33908 653 aa7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 UBASH3AP57075 661 aa7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 SKOR1P84550 965 aa7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 RASSF7Q02833 373 aa7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 HSP90AB3PQ58FF7 597 aa7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 APTXQ7Z2E3 356 aaKnown RBP7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 MYO1AQ9UBC5 1043 aa7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 LZTS1Q9Y250 596 aa7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 PCDHGA10Q9Y5H3 936 aa7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 MYH13Q9UKX3 1938 aa7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 EPB41P11171 864 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms