RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 CRB1P82279 1406 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 TRIM75PA6NK02 468 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 PDE2AO00408 941 aaPredicted RBP11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 XBP1P17861 261 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 CTNNA1P35221 906 aaKnown RBP11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 PCK1P35558 622 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 PAK2Q13177 524 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 EPHA10Q5JZY3 1008 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 USPL1Q5W0Q7 1092 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 NOSTRINQ8IVI9 506 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 PARD3BQ8TEW8 1205 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 KRT12Q99456 494 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 ANGEL1Q9UNK9 670 aaKnown RBP11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 MED23Q9ULK4 1368 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 PHF20L1A8MW92 1017 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 TMCO5BA8MYB1 307 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 KRT71Q3SY84 523 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 TRAPPC11Q7Z392 1133 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 STAMBPL1Q96FJ0 436 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 ZNF594Q96JF6 807 aaPredicted RBP11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 SPAG5Q96R06 1193 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 DSCC1Q9BVC3 393 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 MLXIPQ9HAP2 919 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 HELLSQ9NRZ9 838 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 DIAPH2O60879 1101 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 FSBPO95073 299 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 TTMPQ5BVD1 217 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 ALS2CLQ60I27 953 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 C2CD5Q86YS7 1000 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 SPATA4Q8NEY3 305 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 HVCN1Q96D96 273 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 LACRTQ9GZZ8 138 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 USP42Q9H9J4 1324 aaKnown RBP11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 CHD1O14646 1710 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 ZSCAN5CA6NGD5 496 aaPredicted RBP11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 RNF225M0QZC1 329 aaPredicted RBP11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 KIF5BP33176 963 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 IFNAR2P48551 515 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 CARSP49589 748 aaKnown RBP11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 PTGISQ16647 500 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 ACCSLQ4AC99 568 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 SAMD1Q6SPF0 538 aaPredicted RBP11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 UHMK1Q8TAS1 419 aaKnown RBP11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 CYFIP2Q96F07 1278 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 FAM207AQ9NSI2 230 aaPredicted RBP11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 NOVA2Q9UNW9 492 aaKnown RBP11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 POGZQ7Z3K3 1410 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 ZNF18P17022 549 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 MDH1P40925 334 aaKnown RBP11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 ZC3H6P61129 1189 aaKnown RBP11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 THEMIS2Q5TEJ8 643 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 KSR1Q8IVT5 923 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 FUKQ8N0W3 1084 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 WASF1Q92558 559 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 MS4A14Q96JA4 679 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 HAUS7Q99871 368 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 ACTR5Q9H9F9 607 aaPredicted RBP11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 PLAAQ9Y263 795 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 MAST3O60307 1309 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 ATP7AQ04656 1500 aa11.72□□□□□ -0.53
ARHGEF39-201ENST00000378387 GOLGA6L10A0A0M3HER8 536 aa11.71□□□□□ -0.53
ARHGEF39-201ENST00000378387 GMNCA6NCL1 334 aa11.71□□□□□ -0.53
ARHGEF39-201ENST00000378387 CD44P16070 742 aaKnown RBP11.71□□□□□ -0.53
ARHGEF39-201ENST00000378387 CEP120Q8N960 986 aa11.71□□□□□ -0.53
ARHGEF39-201ENST00000378387 OSBP2Q969R2 916 aa11.71□□□□□ -0.53
ARHGEF39-201ENST00000378387 CD2APQ9Y5K6 639 aa11.71□□□□□ -0.53
ARHGEF39-201ENST00000378387 CDK12Q9NYV4 1490 aaPredicted RBP11.71□□□□□ -0.53
ARHGEF39-201ENST00000378387 ZNF609O15014 1411 aa11.71□□□□□ -0.53
ARHGEF39-201ENST00000378387 B4DLN1 442 aa11.71□□□□□ -0.53
ARHGEF39-201ENST00000378387 M0R2C6 588 aa11.71□□□□□ -0.53
ARHGEF39-201ENST00000378387 MAGEA1P43355 309 aa11.71□□□□□ -0.53
ARHGEF39-201ENST00000378387 SEMA3FQ13275 785 aa11.71□□□□□ -0.53
ARHGEF39-201ENST00000378387 RILPL1Q5EBL4 403 aa11.71□□□□□ -0.53
ARHGEF39-201ENST00000378387 INO80Q9ULG1 1556 aaPredicted RBP11.71□□□□□ -0.54
ARHGEF39-201ENST00000378387 TARSL2A2RTX5 802 aaKnown RBP11.71□□□□□ -0.54
ARHGEF39-201ENST00000378387 TRIM49BA6NDI0 452 aa11.71□□□□□ -0.54
ARHGEF39-201ENST00000378387 EMBQ6PCB8 327 aa11.71□□□□□ -0.54
ARHGEF39-201ENST00000378387 DENND2AQ9ULE3 1009 aa11.71□□□□□ -0.54
ARHGEF39-201ENST00000378387 NRXN1Q9ULB1 1477 aa11.7□□□□□ -0.54
ARHGEF39-201ENST00000378387 PRPF4BQ13523 1007 aaKnown RBP11.7□□□□□ -0.54
ARHGEF39-201ENST00000378387 TRIM14Q14142 442 aa11.7□□□□□ -0.54
ARHGEF39-201ENST00000378387 TRIML1Q8N9V2 468 aa11.7□□□□□ -0.54
ARHGEF39-201ENST00000378387 LMBR1Q8WVP7 490 aa11.7□□□□□ -0.54
ARHGEF39-201ENST00000378387 SYMPKQ92797 1274 aaKnown RBP11.7□□□□□ -0.54
ARHGEF39-201ENST00000378387 NHEJ1Q9H9Q4 299 aaPredicted RBP11.7□□□□□ -0.54
ARHGEF39-201ENST00000378387 NOD2Q9HC29 1040 aa11.7□□□□□ -0.54
ARHGEF39-201ENST00000378387 SAMD15Q9P1V8 674 aa11.7□□□□□ -0.54
ARHGEF39-201ENST00000378387 EME2A4GXA9 379 aaPredicted RBP11.7□□□□□ -0.54
ARHGEF39-201ENST00000378387 NUTM2BA6NNL0 878 aaPredicted RBP11.7□□□□□ -0.54
ARHGEF39-201ENST00000378387 NUTM2EB1AL46 878 aaPredicted RBP11.7□□□□□ -0.54
ARHGEF39-201ENST00000378387 KIF3CO14782 793 aa11.7□□□□□ -0.54
ARHGEF39-201ENST00000378387 MXRA7P84157 204 aa11.7□□□□□ -0.54
ARHGEF39-201ENST00000378387 TRIM58Q8NG06 486 aa11.7□□□□□ -0.54
ARHGEF39-201ENST00000378387 KIF1BO60333 1816 aa11.7□□□□□ -0.54
ARHGEF39-201ENST00000378387 CTNND1O60716 968 aaKnown RBP11.7□□□□□ -0.54
ARHGEF39-201ENST00000378387 RANBP1P43487 201 aa11.7□□□□□ -0.54
ARHGEF39-201ENST00000378387 DDR1Q08345 913 aa11.7□□□□□ -0.54
ARHGEF39-201ENST00000378387 CFAP221Q4G0U5 840 aa11.7□□□□□ -0.54
ARHGEF39-201ENST00000378387 TTC5Q8N0Z6 440 aa11.7□□□□□ -0.54
ARHGEF39-201ENST00000378387 CCDC47Q96A33 483 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms