RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 BRWD3Q6RI45 1802 aa21.91■■□□□ 1.1
PCDHA4-201ENST00000378125 C16orf86Q6ZW13 317 aa21.91■■□□□ 1.1
PCDHA4-201ENST00000378125 MED15Q96RN5 788 aa21.91■■□□□ 1.1
PCDHA4-201ENST00000378125 BLZF1Q9H2G9 400 aa21.91■■□□□ 1.1
PCDHA4-201ENST00000378125 PCDHA4Q9UN74 947 aa21.91■■□□□ 1.1
PCDHA4-201ENST00000378125 SLFN14P0C7P3 912 aa21.9■■□□□ 1.1
PCDHA4-201ENST00000378125 CDK11BP21127 795 aaKnown RBP21.9■■□□□ 1.1
PCDHA4-201ENST00000378125 SFPQP23246 707 aaKnown RBP eCLIP21.9■■□□□ 1.1
PCDHA4-201ENST00000378125 TCP11L1Q9NUJ3 509 aa21.9■■□□□ 1.1
PCDHA4-201ENST00000378125 DAGLAQ9Y4D2 1042 aa21.9■■□□□ 1.1
PCDHA4-201ENST00000378125 CDK5RAP2Q96SN8 1893 aa21.9■■□□□ 1.1
PCDHA4-201ENST00000378125 SNED1Q8TER0 1413 aa21.9■■□□□ 1.1
PCDHA4-201ENST00000378125 KLRF2D3W0D1 207 aa21.9■■□□□ 1.1
PCDHA4-201ENST00000378125 COBLO75128 1261 aa21.9■■□□□ 1.1
PCDHA4-201ENST00000378125 BMP15O95972 392 aa21.9■■□□□ 1.1
PCDHA4-201ENST00000378125 STX17P56962 302 aa21.9■■□□□ 1.1
PCDHA4-201ENST00000378125 CEP95Q96GE4 821 aa21.9■■□□□ 1.1
PCDHA4-201ENST00000378125 SAMSN1Q9NSI8 373 aaKnown RBP21.9■■□□□ 1.1
PCDHA4-201ENST00000378125 CALML3P27482 149 aa21.89■■□□□ 1.1
PCDHA4-201ENST00000378125 SCNN1DP51172 638 aa21.89■■□□□ 1.1
PCDHA4-201ENST00000378125 COL23A1Q86Y22 540 aaPredicted RBP21.89■■□□□ 1.1
PCDHA4-201ENST00000378125 MLKLQ8NB16 471 aa21.89■■□□□ 1.1
PCDHA4-201ENST00000378125 ARID3AQ99856 593 aa21.89■■□□□ 1.1
PCDHA4-201ENST00000378125 PALM3A6NDB9 673 aaPredicted RBP21.89■■□□□ 1.09
PCDHA4-201ENST00000378125 EIF6P56537 245 aaKnown RBP21.89■■□□□ 1.09
PCDHA4-201ENST00000378125 MSL1Q68DK7 614 aa21.89■■□□□ 1.09
PCDHA4-201ENST00000378125 SP8Q8IXZ3 490 aa21.89■■□□□ 1.09
PCDHA4-201ENST00000378125 ZNF287Q9HBT7 754 aa21.89■■□□□ 1.09
PCDHA4-201ENST00000378125 DDX60LQ5H9U9 1706 aaKnown RBP21.88■■□□□ 1.09
PCDHA4-201ENST00000378125 CCDC194A0A1B0GVG4 234 aa21.88■■□□□ 1.09
PCDHA4-201ENST00000378125 CD44P16070 742 aaKnown RBP21.88■■□□□ 1.09
PCDHA4-201ENST00000378125 PLCG2P16885 1265 aa21.88■■□□□ 1.09
PCDHA4-201ENST00000378125 GNAQP50148 359 aa21.88■■□□□ 1.09
PCDHA4-201ENST00000378125 INF2Q27J81 1249 aa21.88■■□□□ 1.09
PCDHA4-201ENST00000378125 CCDC178Q5BJE1 867 aa21.88■■□□□ 1.09
PCDHA4-201ENST00000378125 CLEC10AQ8IUN9 316 aa21.88■■□□□ 1.09
PCDHA4-201ENST00000378125 TBC1D22AQ8WUA7 517 aa21.88■■□□□ 1.09
PCDHA4-201ENST00000378125 INTS13Q9NVM9 706 aa21.88■■□□□ 1.09
PCDHA4-201ENST00000378125 PCDHA6Q9UN73 950 aa21.88■■□□□ 1.09
PCDHA4-201ENST00000378125 PCDHA8Q9Y5H6 950 aa21.88■■□□□ 1.09
PCDHA4-201ENST00000378125 CBFA2T2O43439 604 aa21.88■■□□□ 1.09
PCDHA4-201ENST00000378125 CCAR2Q8N163 923 aaKnown RBP21.88■■□□□ 1.09
PCDHA4-201ENST00000378125 CERS5Q8N5B7 392 aa21.88■■□□□ 1.09
PCDHA4-201ENST00000378125 CCDC150Q8NCX0 1101 aa21.88■■□□□ 1.09
PCDHA4-201ENST00000378125 SPATA20Q8TB22 786 aa21.88■■□□□ 1.09
PCDHA4-201ENST00000378125 ZC3H12CQ9C0D7 883 aaKnown RBP21.88■■□□□ 1.09
PCDHA4-201ENST00000378125 KLRG2A4D1S0 409 aaPredicted RBP21.87■■□□□ 1.09
PCDHA4-201ENST00000378125 STXBP3O00186 592 aa21.87■■□□□ 1.09
PCDHA4-201ENST00000378125 SLF2Q8IX21 1173 aa21.87■■□□□ 1.09
PCDHA4-201ENST00000378125 NEDD1Q8NHV4 660 aa21.87■■□□□ 1.09
PCDHA4-201ENST00000378125 UBA5Q9GZZ9 404 aa21.87■■□□□ 1.09
PCDHA4-201ENST00000378125 DACH1Q9UI36 760 aa21.87■■□□□ 1.09
PCDHA4-201ENST00000378125 ATP6V0A2Q9Y487 856 aa21.87■■□□□ 1.09
PCDHA4-201ENST00000378125 SLURP2P0DP57 97 aa21.86■■□□□ 1.09
PCDHA4-201ENST00000378125 TRAPPC10P48553 1259 aa21.86■■□□□ 1.09
PCDHA4-201ENST00000378125 CEP135Q66GS9 1140 aa21.86■■□□□ 1.09
PCDHA4-201ENST00000378125 SH3RF1Q7Z6J0 888 aa21.86■■□□□ 1.09
PCDHA4-201ENST00000378125 TTF2Q9UNY4 1162 aaKnown RBP21.86■■□□□ 1.09
PCDHA4-201ENST00000378125 GAKO14976 1311 aa21.86■■□□□ 1.09
PCDHA4-201ENST00000378125 PP2D1A8MPX8 630 aa21.86■■□□□ 1.09
PCDHA4-201ENST00000378125 PARP1P09874 1014 aaKnown RBP21.86■■□□□ 1.09
PCDHA4-201ENST00000378125 TOP1P11387 765 aaKnown RBP21.86■■□□□ 1.09
PCDHA4-201ENST00000378125 DPYDQ12882 1025 aa21.86■■□□□ 1.09
PCDHA4-201ENST00000378125 FAM163AQ96GL9 167 aaPredicted RBP21.86■■□□□ 1.09
PCDHA4-201ENST00000378125 DDX4Q9NQI0 724 aaKnown RBP21.86■■□□□ 1.09
PCDHA4-201ENST00000378125 SH3GLB2Q9NR46 395 aa21.86■■□□□ 1.09
PCDHA4-201ENST00000378125 BARHL2Q9NY43 387 aa21.86■■□□□ 1.09
PCDHA4-201ENST00000378125 FRMPD2Q68DX3 1309 aaPredicted RBP21.86■■□□□ 1.09
PCDHA4-201ENST00000378125 USP17L5A8MUK1 530 aa21.85■■□□□ 1.09
PCDHA4-201ENST00000378125 SRGNP10124 158 aa21.85■■□□□ 1.09
PCDHA4-201ENST00000378125 PTPN14Q15678 1187 aa21.85■■□□□ 1.09
PCDHA4-201ENST00000378125 E4F1Q66K89 784 aaPredicted RBP21.85■■□□□ 1.09
PCDHA4-201ENST00000378125 VSTM4Q8IW00 320 aa21.85■■□□□ 1.09
PCDHA4-201ENST00000378125 C4orf32Q8N8J7 132 aa21.85■■□□□ 1.09
PCDHA4-201ENST00000378125 TRIML1Q8N9V2 468 aa21.85■■□□□ 1.09
PCDHA4-201ENST00000378125 ENOX1Q8TC92 643 aaKnown RBP21.85■■□□□ 1.09
PCDHA4-201ENST00000378125 CCDC34Q96HJ3 373 aa21.85■■□□□ 1.09
PCDHA4-201ENST00000378125 PLIN2Q99541 437 aa21.85■■□□□ 1.09
PCDHA4-201ENST00000378125 TMEM60Q9H2L4 133 aa21.85■■□□□ 1.09
PCDHA4-201ENST00000378125 MYH1P12882 1939 aa21.85■■□□□ 1.09
PCDHA4-201ENST00000378125 IGSF3O75054 1194 aa21.85■■□□□ 1.09
PCDHA4-201ENST00000378125 NAPAP54920 295 aa21.85■■□□□ 1.09
PCDHA4-201ENST00000378125 KARSQ15046 597 aaKnown RBP21.85■■□□□ 1.09
PCDHA4-201ENST00000378125 MORC2Q9Y6X9 1032 aaPredicted RBP21.85■■□□□ 1.09
PCDHA4-201ENST00000378125 M0R2N6 131 aa21.84■■□□□ 1.09
PCDHA4-201ENST00000378125 GTF2F1P35269 517 aaKnown RBP eCLIP21.84■■□□□ 1.09
PCDHA4-201ENST00000378125 CUL4BQ13620 913 aa21.84■■□□□ 1.09
PCDHA4-201ENST00000378125 E2F4Q16254 413 aa21.84■■□□□ 1.09
PCDHA4-201ENST00000378125 DPP8Q6V1X1 898 aaPredicted RBP21.84■■□□□ 1.09
PCDHA4-201ENST00000378125 LRRC47Q8N1G4 583 aaKnown RBP21.84■■□□□ 1.09
PCDHA4-201ENST00000378125 IQUBQ8NA54 791 aa21.84■■□□□ 1.09
PCDHA4-201ENST00000378125 MTRQ99707 1265 aa21.84■■□□□ 1.09
PCDHA4-201ENST00000378125 KCNQ5Q9NR82 932 aa21.84■■□□□ 1.09
PCDHA4-201ENST00000378125 ZNF219Q9P2Y4 722 aaPredicted RBP21.84■■□□□ 1.09
PCDHA4-201ENST00000378125 G3V3G9 751 aa21.84■■□□□ 1.09
PCDHA4-201ENST00000378125 RRP9O43818 475 aaKnown RBP21.84■■□□□ 1.09
PCDHA4-201ENST00000378125 APBA3O96018 575 aa21.84■■□□□ 1.09
PCDHA4-201ENST00000378125 DCAF8Q5TAQ9 597 aa21.84■■□□□ 1.09
PCDHA4-201ENST00000378125 CERS3Q8IU89 383 aa21.84■■□□□ 1.09
PCDHA4-201ENST00000378125 PIGSQ96S52 555 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms