RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 CHL1O00533 1208 aa13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 HSPA1LP34931 641 aa13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 WHAMMP3Q1A5X7 153 aa13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 LIN9Q5TKA1 542 aa13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 IFIH1Q9BYX4 1025 aaKnown RBP13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 MTMR3Q13615 1198 aa13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 MORC3Q14149 939 aa13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 RPS6KA1Q15418 735 aa13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 CEP128Q6ZU80 1094 aa13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 SESTD1Q86VW0 696 aa13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 VSIG1Q86XK7 387 aa13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 RPUSD2Q8IZ73 545 aaKnown RBP13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 EDC4Q6P2E9 1401 aaKnown RBP13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 SPDYE16A6NNV3 312 aaPredicted RBP13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 CETN3O15182 167 aa13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 RAD17O75943 681 aa13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 CLUL1Q15846 466 aa13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 SPDYE2Q495Y8 402 aa13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 CEP120Q8N960 986 aa13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 FAM204AQ9H8W3 233 aa13.25□□□□□ -0.29
PCDHA9-201ENST00000378122 PLXNC1O60486 1568 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 HHATQ5VTY9 493 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 VPS52Q8N1B4 723 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 SMC1BQ8NDV3 1235 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 SAR1BQ9Y6B6 198 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 EFCAB8A8MWE9 144 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 SEC31AO94979 1220 aaKnown RBP13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 HAUS3Q68CZ6 603 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 ADALQ6DHV7 355 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 KIAA1468Q9P260 1216 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 GCNT3O95395 438 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 LONRF2Q1L5Z9 754 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 KIF24Q5T7B8 1368 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 ABI1Q8IZP0 508 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 TACO1Q9BSH4 297 aaKnown RBP13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 TSKSQ9UJT2 592 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 KIF21AQ7Z4S6 1674 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 BUB1O43683 1085 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 ADCY7P51828 1080 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 DENND2CQ68D51 928 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 TTC19Q6DKK2 380 aaPredicted RBP13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 RNF10Q8N5U6 811 aaKnown RBP13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 SPATA5Q8NB90 893 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 LRWD1Q9UFC0 647 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 SBNO1A3KN83 1393 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 ITIH3Q06033 890 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 CCDC62Q6P9F0 684 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 PEX26Q7Z412 305 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 SYCE1Q8N0S2 351 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 CCDC110Q8TBZ0 833 aa13.24□□□□□ -0.29
PCDHA9-201ENST00000378122 FOXD4Q12950 439 aaPredicted RBP13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 PTPROQ16827 1216 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 CCDC105Q8IYK2 499 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 ANKRD42Q8N9B4 389 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 POLIQ9UNA4 740 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 TRPC6Q9Y210 931 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 AFF2P51816 1311 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 A0A0D9SFI3 127 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 ATP1A2P50993 1020 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 MYCT1Q8N699 235 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 PPP1R13BQ96KQ4 1090 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 DSCC1Q9BVC3 393 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 CAPS2Q9BXY5 557 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 AS3MTQ9HBK9 375 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 FAM114A2Q9NRY5 505 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 PEG3Q9GZU2 1588 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 STX10O60499 249 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 FAM47AQ5JRC9 791 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 GOLGA5Q8TBA6 731 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 GLG1Q92896 1179 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 SLC10A4Q96EP9 437 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 CLIC4Q9Y696 253 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 ABCC4O15439 1325 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 VCX3BQ9H321 246 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 NLRC4Q9NPP4 1024 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 RIPOR2Q9Y4F9 1068 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 CRCPO75575 148 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 LIG3P49916 1009 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 GOLGA8FQ08AF8 430 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 GOLGA8DPQ0D2H9 430 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 NONOQ15233 471 aaKnown RBP eCLIP13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 MRPL44Q9H9J2 332 aaKnown RBP13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 MLXIPQ9HAP2 919 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 NRBP1Q9UHY1 535 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 MTMR6Q9Y217 621 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 SSH2Q76I76 1423 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 PDE8AO60658 829 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 TTC6Q86TZ1 520 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 VCXQ9H320 206 aa13.23□□□□□ -0.29
PCDHA9-201ENST00000378122 TBC1D8O95759 1140 aa13.22□□□□□ -0.29
PCDHA9-201ENST00000378122 KRT19P08727 400 aa13.22□□□□□ -0.29
PCDHA9-201ENST00000378122 TRIM68Q6AZZ1 485 aa13.22□□□□□ -0.29
PCDHA9-201ENST00000378122 USP28Q96RU2 1077 aa13.22□□□□□ -0.29
PCDHA9-201ENST00000378122 RGS12O14924 1447 aa13.22□□□□□ -0.29
PCDHA9-201ENST00000378122 COBLO75128 1261 aa13.22□□□□□ -0.29
PCDHA9-201ENST00000378122 HERC4Q5GLZ8 1057 aaPredicted RBP13.22□□□□□ -0.29
PCDHA9-201ENST00000378122 PDE11AQ9HCR9 933 aa13.22□□□□□ -0.29
PCDHA9-201ENST00000378122 ZNF335Q9H4Z2 1342 aaPredicted RBP13.22□□□□□ -0.29
PCDHA9-201ENST00000378122 A1BGP04217 495 aa13.22□□□□□ -0.29
PCDHA9-201ENST00000378122 NDUFA8P51970 172 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms