RNA–Protein interactions for RNA: ENST00000377938.2

GKN1-201, Transcript of gastrokine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GKN1, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GKN1-201ENST00000377938 NFIAQ12857 509 aa6.83□□□□□ -1.32
GKN1-201ENST00000377938 COL9A3Q14050 684 aaPredicted RBP6.83□□□□□ -1.32
GKN1-201ENST00000377938 RTN1Q16799 776 aa6.83□□□□□ -1.32
GKN1-201ENST00000377938 LARP1BQ659C4 914 aaKnown RBP6.83□□□□□ -1.32
GKN1-201ENST00000377938 CLEC17AQ6ZS10 378 aa6.83□□□□□ -1.32
GKN1-201ENST00000377938 METTL16Q86W50 562 aaKnown RBP6.83□□□□□ -1.32
GKN1-201ENST00000377938 MICU3Q86XE3 530 aa6.83□□□□□ -1.32
GKN1-201ENST00000377938 STK11IPQ8N1F8 1099 aa6.83□□□□□ -1.32
GKN1-201ENST00000377938 FANCBQ8NB91 859 aa6.83□□□□□ -1.32
GKN1-201ENST00000377938 NSUN7Q8NE18 718 aaKnown RBP6.83□□□□□ -1.32
GKN1-201ENST00000377938 CTCFLQ8NI51 663 aaPredicted RBP6.83□□□□□ -1.32
GKN1-201ENST00000377938 SMARCC2Q8TAQ2 1214 aa6.83□□□□□ -1.32
GKN1-201ENST00000377938 FAM151AQ8WW52 585 aa6.83□□□□□ -1.32
GKN1-201ENST00000377938 DYNLL2Q96FJ2 89 aa6.83□□□□□ -1.32
GKN1-201ENST00000377938 ZBED3Q96IU2 234 aaPredicted RBP6.83□□□□□ -1.32
GKN1-201ENST00000377938 LZTS2Q9BRK4 669 aa6.83□□□□□ -1.32
GKN1-201ENST00000377938 DDX4Q9NQI0 724 aaKnown RBP6.83□□□□□ -1.32
GKN1-201ENST00000377938 INCENPQ9NQS7 918 aa6.83□□□□□ -1.32
GKN1-201ENST00000377938 GJA3Q9Y6H8 435 aa6.83□□□□□ -1.32
GKN1-201ENST00000377938 H3BQV1 296 aa6.82□□□□□ -1.32
GKN1-201ENST00000377938 WNT10BO00744 389 aa6.82□□□□□ -1.32
GKN1-201ENST00000377938 BRD1O95696 1058 aa6.82□□□□□ -1.32
GKN1-201ENST00000377938 ZSCAN22P10073 491 aaPredicted RBP6.82□□□□□ -1.32
GKN1-201ENST00000377938 TOP1P11387 765 aaKnown RBP6.82□□□□□ -1.32
GKN1-201ENST00000377938 SYT1P21579 422 aa6.82□□□□□ -1.32
GKN1-201ENST00000377938 LMOD1P29536 600 aaPredicted RBP6.82□□□□□ -1.32
GKN1-201ENST00000377938 AKAP17AQ02040 695 aaKnown RBP6.82□□□□□ -1.32
GKN1-201ENST00000377938 SSRP1Q08945 709 aaKnown RBP6.82□□□□□ -1.32
GKN1-201ENST00000377938 TCP10Q12799 353 aa6.82□□□□□ -1.32
GKN1-201ENST00000377938 TRIM29Q14134 588 aa6.82□□□□□ -1.32
GKN1-201ENST00000377938 GPR162Q16538 588 aa6.82□□□□□ -1.32
GKN1-201ENST00000377938 KIF4BQ2VIQ3 1234 aa6.82□□□□□ -1.32
GKN1-201ENST00000377938 FAM47AQ5JRC9 791 aa6.82□□□□□ -1.32
GKN1-201ENST00000377938 RBM26Q5T8P6 1007 aaKnown RBP6.82□□□□□ -1.32
GKN1-201ENST00000377938 BLOC1S3Q6QNY0 202 aa6.82□□□□□ -1.32
GKN1-201ENST00000377938 APOBEC3FQ8IUX4 373 aaKnown RBP6.82□□□□□ -1.32
GKN1-201ENST00000377938 CSRNP1Q96S65 589 aa6.82□□□□□ -1.32
GKN1-201ENST00000377938 ZKSCAN3Q9BRR0 538 aa6.82□□□□□ -1.32
GKN1-201ENST00000377938 VEZTQ9HBM0 779 aa6.82□□□□□ -1.32
GKN1-201ENST00000377938 NCOA5Q9HCD5 579 aaKnown RBP6.82□□□□□ -1.32
GKN1-201ENST00000377938 GINM1Q9NU53 330 aa6.82□□□□□ -1.32
GKN1-201ENST00000377938 RNF181Q9P0P0 153 aa6.82□□□□□ -1.32
GKN1-201ENST00000377938 CNOT7Q9UIV1 285 aaKnown RBP6.82□□□□□ -1.32
GKN1-201ENST00000377938 SYNPO2Q9UMS6 1093 aa6.82□□□□□ -1.32
GKN1-201ENST00000377938 PPP2R3BQ9Y5P8 575 aa6.82□□□□□ -1.32
GKN1-201ENST00000377938 TACC3Q9Y6A5 838 aa6.82□□□□□ -1.32
GKN1-201ENST00000377938 ZNF541Q9H0D2 1346 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 CLRN2A0PK11 232 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 TESPA1A2RU30 521 aaPredicted RBP6.81□□□□□ -1.32
GKN1-201ENST00000377938 TCP10L2B9ZVM9 353 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 FMNL1O95466 1100 aaPredicted RBP6.81□□□□□ -1.32
GKN1-201ENST00000377938 TTLL1O95922 423 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 YBX3P16989 372 aaKnown RBP eCLIP6.81□□□□□ -1.32
GKN1-201ENST00000377938 IFNAR1P17181 557 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 XBP1P17861 261 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 SHMT1P34896 483 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 CACNB3P54284 484 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 ST3GAL1Q11201 340 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 TROAPQ12815 778 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 PTGDRQ13258 359 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 CSPP1Q1MSJ5 1256 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 SLC4A8Q2Y0W8 1093 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 CERKLQ49MI3 558 aaPredicted RBP6.81□□□□□ -1.32
GKN1-201ENST00000377938 KMT5BQ4FZB7 885 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 TATDN1Q6P1N9 297 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 TMEM179Q6ZVK1 233 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 FAM177A1Q8N128 213 aaPredicted RBP6.81□□□□□ -1.32
GKN1-201ENST00000377938 SLC44A5Q8NCS7 719 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 PNMA1Q8ND90 353 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 RBM46Q8TBY0 533 aaKnown RBP6.81□□□□□ -1.32
GKN1-201ENST00000377938 NUP133Q8WUM0 1156 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 TNPO1Q92973 898 aaKnown RBP6.81□□□□□ -1.32
GKN1-201ENST00000377938 RNF26Q9BY78 433 aaPredicted RBP6.81□□□□□ -1.32
GKN1-201ENST00000377938 ZSCAN16Q9H4T2 348 aaPredicted RBP6.81□□□□□ -1.32
GKN1-201ENST00000377938 KANSL2Q9H9L4 492 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.81□□□□□ -1.32
GKN1-201ENST00000377938 CABP5Q9NP86 173 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 IL17RBQ9NRM6 502 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 GPRC5DQ9NZD1 345 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 ORC3Q9UBD5 711 aaPredicted RBP6.81□□□□□ -1.32
GKN1-201ENST00000377938 STX8Q9UNK0 236 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 MYH8P13535 1937 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 CNTNAP1P78357 1384 aa6.81□□□□□ -1.32
GKN1-201ENST00000377938 PITPNM2Q9BZ72 1349 aa6.8□□□□□ -1.32
GKN1-201ENST00000377938 IGKV6D-41A0A0C4DH26 115 aa6.8□□□□□ -1.32
GKN1-201ENST00000377938 VPS37CA5D8V6 355 aaPredicted RBP6.8□□□□□ -1.32
GKN1-201ENST00000377938 DDTLA6NHG4 134 aaPredicted RBP6.8□□□□□ -1.32
GKN1-201ENST00000377938 SMIM22K7EJ46 135 aa6.8□□□□□ -1.32
GKN1-201ENST00000377938 MPHOSPH10O00566 681 aaKnown RBP6.8□□□□□ -1.32
GKN1-201ENST00000377938 TLL1O43897 1013 aa6.8□□□□□ -1.32
GKN1-201ENST00000377938 JAK2O60674 1132 aa6.8□□□□□ -1.32
GKN1-201ENST00000377938 SBF1O95248 1867 aa6.8□□□□□ -1.32
GKN1-201ENST00000377938 DEXIO95424 95 aa6.8□□□□□ -1.32
GKN1-201ENST00000377938 CTDNEP1O95476 244 aa6.8□□□□□ -1.32
GKN1-201ENST00000377938 F13A1P00488 732 aa6.8□□□□□ -1.32
GKN1-201ENST00000377938 SMARCA1P28370 1054 aa6.8□□□□□ -1.32
GKN1-201ENST00000377938 NOVP48745 357 aa6.8□□□□□ -1.32
GKN1-201ENST00000377938 PRELPP51888 382 aa6.8□□□□□ -1.32
GKN1-201ENST00000377938 GRM4Q14833 912 aa6.8□□□□□ -1.32
GKN1-201ENST00000377938 ABCB5Q2M3G0 1257 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms