RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 BLIDQ8IZY5 108 aa13.32□□□□□ -0.28
TNFRSF9-201ENST00000377507 FAM177A1Q8N128 213 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF9-201ENST00000377507 IGSF22Q8N9C0 903 aa13.32□□□□□ -0.28
TNFRSF9-201ENST00000377507 DAGLBQ8NCG7 672 aa13.32□□□□□ -0.28
TNFRSF9-201ENST00000377507 CCDC51Q96ER9 411 aa13.32□□□□□ -0.28
TNFRSF9-201ENST00000377507 WDR24Q96S15 920 aa13.32□□□□□ -0.28
TNFRSF9-201ENST00000377507 MCM9Q9NXL9 1143 aa13.32□□□□□ -0.28
TNFRSF9-201ENST00000377507 SRP68Q9UHB9 627 aaKnown RBP13.32□□□□□ -0.28
TNFRSF9-201ENST00000377507 PCDHA4Q9UN74 947 aa13.32□□□□□ -0.28
TNFRSF9-201ENST00000377507 CCDC88AQ3V6T2 1871 aa13.32□□□□□ -0.28
TNFRSF9-201ENST00000377507 LTBP4Q8N2S1 1624 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 TPM1P09493 284 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 MCM7P33993 719 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 GNAQP50148 359 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 STX17P56962 302 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 GNG11P61952 73 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 TFAP4Q01664 338 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 ARHGAP29Q52LW3 1261 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 ZNF658Q5TYW1 1059 aaPredicted RBP13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 GALNT17Q6IS24 598 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 KLHL10Q6JEL2 608 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 SMIM5Q71RC9 77 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 SMYD4Q8IYR2 804 aaPredicted RBP13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 KRT222Q8N1A0 295 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 WDR66Q8TBY9 1149 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 UBXN4Q92575 508 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 KAT14Q9H8E8 782 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 MFAP3LO75121 409 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 ZPR1O75312 459 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 CCDC175P0C221 793 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 CASQ1P31415 396 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 CLCN6P51797 869 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 SEMA3FQ13275 785 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 FILIP1LQ4L180 1135 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 PPFIBP1Q86W92 1011 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 PNMA1Q8ND90 353 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 RMND1Q9NWS8 449 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 MAD2L2Q9UI95 211 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 LEMD3Q9Y2U8 911 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 MRFAP1Q9Y605 127 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 ADGRG1Q9Y653 693 aa13.31□□□□□ -0.28
TNFRSF9-201ENST00000377507 FAM205AQ6ZU69 1335 aa13.3□□□□□ -0.28
TNFRSF9-201ENST00000377507 NUTM2BA6NNL0 878 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF9-201ENST00000377507 NUTM2EB1AL46 878 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF9-201ENST00000377507 SPAG1Q07617 926 aa13.3□□□□□ -0.28
TNFRSF9-201ENST00000377507 VPS72Q15906 364 aa13.3□□□□□ -0.28
TNFRSF9-201ENST00000377507 FAM98CQ17RN3 349 aaKnown RBP13.3□□□□□ -0.28
TNFRSF9-201ENST00000377507 RAD9BQ6WBX8 426 aa13.3□□□□□ -0.28
TNFRSF9-201ENST00000377507 C15orf52Q6ZUT6 534 aaKnown RBP13.3□□□□□ -0.28
TNFRSF9-201ENST00000377507 RASGRP2Q7LDG7 609 aa13.3□□□□□ -0.28
TNFRSF9-201ENST00000377507 PTF1AQ7RTS3 328 aa13.3□□□□□ -0.28
TNFRSF9-201ENST00000377507 DZIP1Q86YF9 867 aaKnown RBP13.3□□□□□ -0.28
TNFRSF9-201ENST00000377507 CARD6Q9BX69 1037 aa13.3□□□□□ -0.28
TNFRSF9-201ENST00000377507 BLZF1Q9H2G9 400 aa13.3□□□□□ -0.28
TNFRSF9-201ENST00000377507 SOWAHDA6NJG2 315 aa13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 NPHP1O15259 732 aa13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 ZRANB2O95218 330 aaKnown RBP eCLIP13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 GYPCP04921 128 aa13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 BMS1Q14692 1282 aaKnown RBP13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 MTF1Q14872 753 aa13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 KRT31Q15323 416 aa13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 SLC35G1Q2M3R5 365 aa13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 RRAGBQ5VZM2 374 aa13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 TYW1BQ6NUM6 668 aa13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 CNGA4Q8IV77 575 aa13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 STAG2Q8N3U4 1231 aa13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 MNS1Q8NEH6 495 aa13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 STAMQ92783 540 aa13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 MRPL44Q9H9J2 332 aaKnown RBP13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 CTNND2Q9UQB3 1225 aa13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 FHOD1Q9Y613 1164 aa13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 PALM3A6NDB9 673 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 RPN1P04843 607 aaKnown RBP13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 MYL1P05976 194 aa13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 LDHBP07195 334 aaKnown RBP13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 GSTO1P78417 241 aa13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 PAK1Q13153 545 aa13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 NAALADL2Q58DX5 795 aa13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 RSRC2Q7L4I2 434 aaKnown RBP13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 SH3RF3Q8TEJ3 882 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 DESI2Q9BSY9 194 aa13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 PCDHA6Q9UN73 950 aa13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 PCDHA8Q9Y5H6 950 aa13.29□□□□□ -0.28
TNFRSF9-201ENST00000377507 LAD1O00515 517 aa13.28□□□□□ -0.28
TNFRSF9-201ENST00000377507 GNPATO15228 680 aa13.28□□□□□ -0.28
TNFRSF9-201ENST00000377507 CYTH3O43739 400 aa13.28□□□□□ -0.28
TNFRSF9-201ENST00000377507 BAG3O95817 575 aa13.28□□□□□ -0.28
TNFRSF9-201ENST00000377507 CASP14P31944 242 aa13.28□□□□□ -0.28
TNFRSF9-201ENST00000377507 TXLNAP40222 546 aa13.28□□□□□ -0.28
TNFRSF9-201ENST00000377507 KCNB1Q14721 858 aa13.28□□□□□ -0.28
TNFRSF9-201ENST00000377507 TCP11X2Q5H9J9 407 aa13.28□□□□□ -0.28
TNFRSF9-201ENST00000377507 ARHGEF1Q92888 912 aaKnown RBP13.28□□□□□ -0.28
TNFRSF9-201ENST00000377507 DYNLL2Q96FJ2 89 aa13.28□□□□□ -0.28
TNFRSF9-201ENST00000377507 LZTS2Q9BRK4 669 aa13.28□□□□□ -0.28
TNFRSF9-201ENST00000377507 CCSER1Q9C0I3 900 aa13.28□□□□□ -0.28
TNFRSF9-201ENST00000377507 DISC1Q9NRI5 854 aa13.28□□□□□ -0.28
TNFRSF9-201ENST00000377507 BARHL2Q9NY43 387 aa13.28□□□□□ -0.28
TNFRSF9-201ENST00000377507 RTCBQ9Y3I0 505 aaKnown RBP13.28□□□□□ -0.28
TNFRSF9-201ENST00000377507 H7C1D1 291 aa13.27□□□□□ -0.28
TNFRSF9-201ENST00000377507 KIF20AO95235 890 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms