RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 ABRAQ8N0Z2 381 aa23.03■■□□□ 1.28
CBWD3-204ENST00000377349 DEFB123Q8N688 67 aa23.03■■□□□ 1.28
CBWD3-204ENST00000377349 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.03■■□□□ 1.28
CBWD3-204ENST00000377349 MROH8Q9H579 483 aa23.03■■□□□ 1.28
CBWD3-204ENST00000377349 EEF2P13639 858 aaKnown RBP23.02■■□□□ 1.28
CBWD3-204ENST00000377349 GJC2Q5T442 439 aaPredicted RBP23.02■■□□□ 1.28
CBWD3-204ENST00000377349 FBXO28Q9NVF7 368 aa23.02■■□□□ 1.28
CBWD3-204ENST00000377349 SEPT4O43236 478 aa23.01■■□□□ 1.27
CBWD3-204ENST00000377349 RRP1P56182 461 aaKnown RBP23.01■■□□□ 1.27
CBWD3-204ENST00000377349 PLS1Q14651 629 aa23.01■■□□□ 1.27
CBWD3-204ENST00000377349 ANO1Q5XXA6 986 aa23.01■■□□□ 1.27
CBWD3-204ENST00000377349 TSHZ3Q63HK5 1081 aa23.01■■□□□ 1.27
CBWD3-204ENST00000377349 NCAPG2Q86XI2 1143 aa23.01■■□□□ 1.27
CBWD3-204ENST00000377349 GPATCH3Q96I76 525 aa23.01■■□□□ 1.27
CBWD3-204ENST00000377349 MAML3Q96JK9 1138 aa23.01■■□□□ 1.27
CBWD3-204ENST00000377349 SH2D4AQ9H788 454 aa23.01■■□□□ 1.27
CBWD3-204ENST00000377349 SLC4A4Q9Y6R1 1079 aa23.01■■□□□ 1.27
CBWD3-204ENST00000377349 PRUNE2Q8WUY3 3088 aa23.01■■□□□ 1.27
CBWD3-204ENST00000377349 RTP1P59025 263 aa23■■□□□ 1.27
CBWD3-204ENST00000377349 PRAMEF19Q5SWL8 479 aa23■■□□□ 1.27
CBWD3-204ENST00000377349 SLC17A8Q8NDX2 589 aa23■■□□□ 1.27
CBWD3-204ENST00000377349 MTMR10Q9NXD2 777 aa23■■□□□ 1.27
CBWD3-204ENST00000377349 REPS2Q8NFH8 660 aa22.99■■□□□ 1.27
CBWD3-204ENST00000377349 KANSL2Q9H9L4 492 aa22.99■■□□□ 1.27
CBWD3-204ENST00000377349 ECHDC1Q9NTX5 307 aa22.99■■□□□ 1.27
CBWD3-204ENST00000377349 SNX17Q15036 470 aa22.99■■□□□ 1.27
CBWD3-204ENST00000377349 ZNF214Q9UL59 606 aaPredicted RBP22.99■■□□□ 1.27
CBWD3-204ENST00000377349 SAMD1Q6SPF0 538 aaPredicted RBP22.98■■□□□ 1.27
CBWD3-204ENST00000377349 RIOX2Q8IUF8 465 aa22.98■■□□□ 1.27
CBWD3-204ENST00000377349 ARRDC4Q8NCT1 418 aa22.98■■□□□ 1.27
CBWD3-204ENST00000377349 STRBPQ96SI9 672 aaKnown RBP22.98■■□□□ 1.27
CBWD3-204ENST00000377349 DCTPP1Q9H773 170 aa22.98■■□□□ 1.27
CBWD3-204ENST00000377349 PPP1R9AQ9ULJ8 1098 aa22.98■■□□□ 1.27
CBWD3-204ENST00000377349 VCANP13611 3396 aa22.97■■□□□ 1.27
CBWD3-204ENST00000377349 VWA5AO00534 786 aa22.97■■□□□ 1.27
CBWD3-204ENST00000377349 SLC25A27O95847 323 aa22.97■■□□□ 1.27
CBWD3-204ENST00000377349 FCER1AP12319 257 aa22.97■■□□□ 1.27
CBWD3-204ENST00000377349 FAM47AQ5JRC9 791 aa22.97■■□□□ 1.27
CBWD3-204ENST00000377349 ZSCAN25Q6NSZ9 544 aa22.97■■□□□ 1.27
CBWD3-204ENST00000377349 SLC39A5Q6ZMH5 540 aa22.97■■□□□ 1.27
CBWD3-204ENST00000377349 AMOTL1Q8IY63 956 aa22.97■■□□□ 1.27
CBWD3-204ENST00000377349 SLC5A4Q9NY91 659 aa22.97■■□□□ 1.27
CBWD3-204ENST00000377349 ARPP21Q9UBL0 812 aaPredicted RBP22.97■■□□□ 1.27
CBWD3-204ENST00000377349 ROBO3Q96MS0 1386 aa22.97■■□□□ 1.27
CBWD3-204ENST00000377349 GSG1L2A8MUP6 293 aa22.96■■□□□ 1.27
CBWD3-204ENST00000377349 PGK2P07205 417 aa22.96■■□□□ 1.27
CBWD3-204ENST00000377349 RASA1P20936 1047 aa22.96■■□□□ 1.27
CBWD3-204ENST00000377349 LRRC41Q15345 812 aa22.96■■□□□ 1.27
CBWD3-204ENST00000377349 SBK1Q52WX2 424 aa22.96■■□□□ 1.27
CBWD3-204ENST00000377349 FAM83BQ5T0W9 1011 aa22.96■■□□□ 1.27
CBWD3-204ENST00000377349 DDRGK1Q96HY6 314 aa22.96■■□□□ 1.27
CBWD3-204ENST00000377349 CRBNQ96SW2 442 aa22.96■■□□□ 1.27
CBWD3-204ENST00000377349 STXBP5LQ9Y2K9 1186 aa22.96■■□□□ 1.27
CBWD3-204ENST00000377349 PCDHB15Q9Y5E8 787 aa22.96■■□□□ 1.27
CBWD3-204ENST00000377349 KBTBD13C9JR72 458 aa22.95■■□□□ 1.26
CBWD3-204ENST00000377349 ZNF792Q3KQV3 632 aa22.95■■□□□ 1.26
CBWD3-204ENST00000377349 OSBP2Q969R2 916 aa22.95■■□□□ 1.26
CBWD3-204ENST00000377349 MMP19Q99542 508 aa22.95■■□□□ 1.26
CBWD3-204ENST00000377349 GOPCQ9HD26 462 aa22.95■■□□□ 1.26
CBWD3-204ENST00000377349 ATP11BQ9Y2G3 1177 aa22.95■■□□□ 1.26
CBWD3-204ENST00000377349 POTEB2H3BUK9 544 aa22.94■■□□□ 1.26
CBWD3-204ENST00000377349 TRIM60Q495X7 471 aa22.94■■□□□ 1.26
CBWD3-204ENST00000377349 LBHD1Q9BQE6 289 aaPredicted RBP22.94■■□□□ 1.26
CBWD3-204ENST00000377349 EPB41L4AQ9HCS5 686 aaPredicted RBP22.94■■□□□ 1.26
CBWD3-204ENST00000377349 TAL1P17542 331 aaPredicted RBP22.93■■□□□ 1.26
CBWD3-204ENST00000377349 STAT3P40763 770 aa22.93■■□□□ 1.26
CBWD3-204ENST00000377349 ADCYAP1R1P41586 468 aa22.93■■□□□ 1.26
CBWD3-204ENST00000377349 KBTBD3Q8NAB2 608 aa22.93■■□□□ 1.26
CBWD3-204ENST00000377349 NUP88Q99567 741 aaPredicted RBP22.93■■□□□ 1.26
CBWD3-204ENST00000377349 ZBTB47Q9UFB7 747 aaPredicted RBP22.93■■□□□ 1.26
CBWD3-204ENST00000377349 NRBP1Q9UHY1 535 aa22.93■■□□□ 1.26
CBWD3-204ENST00000377349 C1orf53Q5VUE5 145 aa22.92■■□□□ 1.26
CBWD3-204ENST00000377349 GIMAP6Q6P9H5 292 aa22.92■■□□□ 1.26
CBWD3-204ENST00000377349 TINF2Q9BSI4 451 aa22.92■■□□□ 1.26
CBWD3-204ENST00000377349 PDLIM7Q9NR12 457 aa22.92■■□□□ 1.26
CBWD3-204ENST00000377349 DIS3Q9Y2L1 958 aaKnown RBP22.92■■□□□ 1.26
CBWD3-204ENST00000377349 IGKV6D-41A0A0C4DH26 115 aa22.91■■□□□ 1.26
CBWD3-204ENST00000377349 DLL1O00548 723 aa22.91■■□□□ 1.26
CBWD3-204ENST00000377349 SH3RF1Q7Z6J0 888 aa22.91■■□□□ 1.26
CBWD3-204ENST00000377349 APPBP2Q92624 585 aa22.91■■□□□ 1.26
CBWD3-204ENST00000377349 FERMT2Q96AC1 680 aa22.91■■□□□ 1.26
CBWD3-204ENST00000377349 GUCD1Q96NT3 240 aa22.91■■□□□ 1.26
CBWD3-204ENST00000377349 NYAP2Q9P242 653 aa22.91■■□□□ 1.26
CBWD3-204ENST00000377349 PHF24Q9UPV7 400 aa22.91■■□□□ 1.26
CBWD3-204ENST00000377349 TRIM43BA6NCK2 446 aa22.91■■□□□ 1.26
CBWD3-204ENST00000377349 MYCNP04198 464 aaPredicted RBP22.91■■□□□ 1.26
CBWD3-204ENST00000377349 ZNF865P0CJ78 1059 aaPredicted RBP22.91■■□□□ 1.26
CBWD3-204ENST00000377349 KCTD2Q14681 263 aa22.91■■□□□ 1.26
CBWD3-204ENST00000377349 FAM109BQ6ICB4 259 aaPredicted RBP22.91■■□□□ 1.26
CBWD3-204ENST00000377349 STK11IPQ8N1F8 1099 aa22.91■■□□□ 1.26
CBWD3-204ENST00000377349 TRIM43Q96BQ3 446 aaPredicted RBP22.91■■□□□ 1.26
CBWD3-204ENST00000377349 PRKAG2Q9UGJ0 569 aa22.91■■□□□ 1.26
CBWD3-204ENST00000377349 RAD21O60216 631 aa22.9■■□□□ 1.26
CBWD3-204ENST00000377349 NDUFB10O96000 172 aa22.9■■□□□ 1.26
CBWD3-204ENST00000377349 C9orf50Q5SZB4 431 aa22.9■■□□□ 1.26
CBWD3-204ENST00000377349 LENG1Q96BZ8 264 aaPredicted RBP22.9■■□□□ 1.26
CBWD3-204ENST00000377349 SLF1Q9BQI6 1058 aa22.9■■□□□ 1.26
CBWD3-204ENST00000377349 XPNPEP3Q9NQH7 507 aa22.9■■□□□ 1.26
CBWD3-204ENST00000377349 RIPK3Q9Y572 518 aa22.9■■□□□ 1.26
CBWD3-204ENST00000377349 MYO9BQ13459 2157 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms