RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 HPS3Q969F9 1004 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 NLRC4Q9NPP4 1024 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 MMP10P09238 476 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 VEGFAP15692 232 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-203ENST00000376619 SPA17Q15506 151 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 TMEM132AQ24JP5 1023 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 KRT79Q5XKE5 535 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 ATL3Q6DD88 541 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 MIGA2Q7L4E1 593 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 TMEM87AQ8NBN3 555 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 KANSL2Q9H9L4 492 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 LRWD1Q9UFC0 647 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 GDAQ9Y2T3 454 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 CAMTA1Q9Y6Y1 1673 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 TRAF5O00463 557 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 NEMFO60524 1076 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 NOP2P46087 812 aaKnown RBP12.55□□□□□ -0.4
HDAC6-203ENST00000376619 PLCD1P51178 756 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 TDRD7Q8NHU6 1098 aaKnown RBP12.55□□□□□ -0.4
HDAC6-203ENST00000376619 SNX29Q8TEQ0 813 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 RBM28Q9NW13 759 aaKnown RBP12.55□□□□□ -0.4
HDAC6-203ENST00000376619 COL5A2P05997 1499 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-203ENST00000376619 KNDC1Q76NI1 1749 aa12.54□□□□□ -0.4
HDAC6-203ENST00000376619 SLU7O95391 586 aaKnown RBP12.54□□□□□ -0.4
HDAC6-203ENST00000376619 NTSR2O95665 410 aa12.54□□□□□ -0.4
HDAC6-203ENST00000376619 NELFBQ8WX92 580 aa12.54□□□□□ -0.4
HDAC6-203ENST00000376619 RAB34Q9BZG1 259 aa12.54□□□□□ -0.4
HDAC6-203ENST00000376619 MRPS25P82663 173 aaKnown RBP12.54□□□□□ -0.4
HDAC6-203ENST00000376619 MYRIPQ8NFW9 859 aa12.54□□□□□ -0.4
HDAC6-203ENST00000376619 SETD1AO15047 1707 aaKnown RBP12.54□□□□□ -0.4
HDAC6-203ENST00000376619 USP32Q8NFA0 1604 aa12.54□□□□□ -0.4
HDAC6-203ENST00000376619 CCP110O43303 1012 aa12.54□□□□□ -0.4
HDAC6-203ENST00000376619 RPS6KA4O75676 772 aa12.54□□□□□ -0.4
HDAC6-203ENST00000376619 GNA11P29992 359 aa12.54□□□□□ -0.4
HDAC6-203ENST00000376619 REXO1Q8N1G1 1221 aaKnown RBP12.54□□□□□ -0.4
HDAC6-203ENST00000376619 RABEP2Q9H5N1 569 aa12.54□□□□□ -0.4
HDAC6-203ENST00000376619 PRPF4BQ13523 1007 aaKnown RBP12.53□□□□□ -0.4
HDAC6-203ENST00000376619 TSGA10IPQ3SY00 556 aa12.53□□□□□ -0.4
HDAC6-203ENST00000376619 CCDC70Q6NSX1 233 aa12.53□□□□□ -0.4
HDAC6-203ENST00000376619 MAN1B1Q9UKM7 699 aa12.53□□□□□ -0.4
HDAC6-203ENST00000376619 BCL9LQ86UU0 1499 aa12.53□□□□□ -0.4
HDAC6-203ENST00000376619 TRIM49BA6NDI0 452 aa12.53□□□□□ -0.4
HDAC6-203ENST00000376619 AKR1B15C9JRZ8 316 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-203ENST00000376619 LIFRP42702 1097 aa12.53□□□□□ -0.4
HDAC6-203ENST00000376619 DCAF17Q5H9S7 520 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-203ENST00000376619 WWC2Q6AWC2 1192 aa12.53□□□□□ -0.4
HDAC6-203ENST00000376619 SRBD1Q8N5C6 995 aaKnown RBP12.53□□□□□ -0.4
HDAC6-203ENST00000376619 IRX2Q9BZI1 471 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-203ENST00000376619 NARFQ9UHQ1 456 aa12.53□□□□□ -0.4
HDAC6-203ENST00000376619 MED1Q15648 1581 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-203ENST00000376619 NONOQ15233 471 aaKnown RBP eCLIP12.53□□□□□ -0.4
HDAC6-203ENST00000376619 LRP10Q7Z4F1 713 aa12.53□□□□□ -0.4
HDAC6-203ENST00000376619 PAXBP1Q9Y5B6 917 aa12.53□□□□□ -0.4
HDAC6-203ENST00000376619 SPDYE3A6NKU9 549 aa12.52□□□□□ -0.4
HDAC6-203ENST00000376619 NCAPH2Q6IBW4 605 aa12.52□□□□□ -0.4
HDAC6-203ENST00000376619 CABP7Q86V35 215 aa12.52□□□□□ -0.4
HDAC6-203ENST00000376619 LARGE2Q8N3Y3 721 aa12.52□□□□□ -0.4
HDAC6-203ENST00000376619 KIFC2Q96AC6 838 aa12.52□□□□□ -0.4
HDAC6-203ENST00000376619 TMEM260Q9NX78 707 aa12.52□□□□□ -0.4
HDAC6-203ENST00000376619 ARPP21Q9UBL0 812 aaPredicted RBP12.52□□□□□ -0.4
HDAC6-203ENST00000376619 LUC7L2Q9Y383 392 aaKnown RBP12.52□□□□□ -0.4
HDAC6-203ENST00000376619 MEIS1O00470 390 aa12.52□□□□□ -0.41
HDAC6-203ENST00000376619 PPIP5K2O43314 1243 aa12.52□□□□□ -0.41
HDAC6-203ENST00000376619 CCDC175P0C221 793 aa12.52□□□□□ -0.41
HDAC6-203ENST00000376619 GTF2F1P35269 517 aaKnown RBP eCLIP12.52□□□□□ -0.412e-6■■■■■ 28.7
HDAC6-203ENST00000376619 HERC4Q5GLZ8 1057 aaPredicted RBP12.52□□□□□ -0.41
HDAC6-203ENST00000376619 ZNF397Q8NF99 534 aaPredicted RBP12.52□□□□□ -0.41
HDAC6-203ENST00000376619 MROH7-TTC4A0A0A0MT08 1334 aa12.52□□□□□ -0.41
HDAC6-203ENST00000376619 PEAK1Q9H792 1746 aa12.52□□□□□ -0.41
HDAC6-203ENST00000376619 TMCO5BA8MYB1 307 aa12.52□□□□□ -0.41
HDAC6-203ENST00000376619 ENC1O14682 589 aa12.52□□□□□ -0.41
HDAC6-203ENST00000376619 PAK1Q13153 545 aa12.52□□□□□ -0.41
HDAC6-203ENST00000376619 NSUN4Q96CB9 384 aaKnown RBP12.52□□□□□ -0.41
HDAC6-203ENST00000376619 NOC4LQ9BVI4 516 aaKnown RBP12.52□□□□□ -0.41
HDAC6-203ENST00000376619 OVOS2A0A0G2JMS6 1433 aa12.52□□□□□ -0.41
HDAC6-203ENST00000376619 USP17L5A8MUK1 530 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 TEX33O43247 280 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 POLD1P28340 1107 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 CASP14P31944 242 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 GPSM2P81274 684 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 GPS2Q13227 327 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 MTERF4Q7Z6M4 381 aaKnown RBP12.51□□□□□ -0.41
HDAC6-203ENST00000376619 CUL5Q93034 780 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 CD209Q9NNX6 404 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 PDE4DIPQ5VU43 2346 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 DLG5Q8TDM6 1919 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 A0A1W2PQ27 194 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 A0A1W2PQ64 194 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 A0A1W2PQD8 194 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 EVCP57679 992 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 CUL4BQ13620 913 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 DNAJC21Q5F1R6 531 aaKnown RBP12.51□□□□□ -0.41
HDAC6-203ENST00000376619 SYCP3Q8IZU3 236 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 MLKLQ8NB16 471 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 TBCKQ8TEA7 893 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 RUFY1Q96T51 708 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 XDHP47989 1333 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 SSR1P43307 286 aaKnown RBP12.51□□□□□ -0.41
HDAC6-203ENST00000376619 CDK8P49336 464 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 AMPD3Q01432 767 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms