RNA–Protein interactions for RNA: ENST00000376188.1

PPP1R3F-202, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 2,443 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-202ENST00000376188 TMEM47Q9BQJ4 181 aa21.46■■□□□ 1.03
PPP1R3F-202ENST00000376188 PDCL3Q9H2J4 239 aa21.46■■□□□ 1.03
PPP1R3F-202ENST00000376188 FLT1P17948 1338 aa21.46■■□□□ 1.03
PPP1R3F-202ENST00000376188 FAM205AQ6ZU69 1335 aa21.46■■□□□ 1.03
PPP1R3F-202ENST00000376188 VEGFAP15692 232 aaPredicted RBP21.46■■□□□ 1.03
PPP1R3F-202ENST00000376188 NYAP1Q6ZVC0 841 aa21.46■■□□□ 1.03
PPP1R3F-202ENST00000376188 VSTM4Q8IW00 320 aa21.46■■□□□ 1.03
PPP1R3F-202ENST00000376188 DPF2Q92785 391 aa21.46■■□□□ 1.03
PPP1R3F-202ENST00000376188 PAGE5Q96GU1 130 aa21.46■■□□□ 1.03
PPP1R3F-202ENST00000376188 GSDMAQ96QA5 445 aa21.46■■□□□ 1.03
PPP1R3F-202ENST00000376188 QTRT2Q9H974 415 aaKnown RBP21.46■■□□□ 1.03
PPP1R3F-202ENST00000376188 NFE2L3Q9Y4A8 694 aa21.46■■□□□ 1.03
PPP1R3F-202ENST00000376188 ANKRD31Q8N7Z5 1873 aa21.46■■□□□ 1.03
PPP1R3F-202ENST00000376188 PALM3A6NDB9 673 aaPredicted RBP21.45■■□□□ 1.02
PPP1R3F-202ENST00000376188 CDK8P49336 464 aa21.45■■□□□ 1.02
PPP1R3F-202ENST00000376188 PTPN14Q15678 1187 aa21.45■■□□□ 1.02
PPP1R3F-202ENST00000376188 DAGLBQ8NCG7 672 aa21.45■■□□□ 1.02
PPP1R3F-202ENST00000376188 GPKOWQ92917 476 aaPredicted RBP eCLIP21.45■■□□□ 1.02
PPP1R3F-202ENST00000376188 EYA3Q99504 573 aa21.45■■□□□ 1.02
PPP1R3F-202ENST00000376188 USP27XA6NNY8 438 aa21.45■■□□□ 1.02
PPP1R3F-202ENST00000376188 C6orf229H3BNL8 230 aa21.45■■□□□ 1.02
PPP1R3F-202ENST00000376188 ZNF18P17022 549 aa21.45■■□□□ 1.02
PPP1R3F-202ENST00000376188 MCM7P33993 719 aa21.45■■□□□ 1.02
PPP1R3F-202ENST00000376188 ZNF827Q17R98 1081 aa21.45■■□□□ 1.02
PPP1R3F-202ENST00000376188 IQUBQ8NA54 791 aa21.45■■□□□ 1.02
PPP1R3F-202ENST00000376188 CCDC112Q8NEF3 446 aa21.45■■□□□ 1.02
PPP1R3F-202ENST00000376188 NEDD1Q8NHV4 660 aa21.45■■□□□ 1.02
PPP1R3F-202ENST00000376188 MYH8P13535 1937 aa21.44■■□□□ 1.02
PPP1R3F-202ENST00000376188 KIF2AO00139 706 aaPredicted RBP21.44■■□□□ 1.02
PPP1R3F-202ENST00000376188 RHBDL3P58872 404 aa21.44■■□□□ 1.02
PPP1R3F-202ENST00000376188 FMR1Q06787 632 aaKnown RBP eCLIP21.44■■□□□ 1.02
PPP1R3F-202ENST00000376188 CEP135Q66GS9 1140 aa21.44■■□□□ 1.02
PPP1R3F-202ENST00000376188 KRT27Q7Z3Y8 459 aa21.44■■□□□ 1.02
PPP1R3F-202ENST00000376188 SP8Q8IXZ3 490 aa21.44■■□□□ 1.02
PPP1R3F-202ENST00000376188 TOP1P11387 765 aaKnown RBP21.44■■□□□ 1.02
PPP1R3F-202ENST00000376188 AFMP43652 599 aa21.44■■□□□ 1.02
PPP1R3F-202ENST00000376188 DPYDQ12882 1025 aa21.44■■□□□ 1.02
PPP1R3F-202ENST00000376188 PSDA5PKW4 1024 aaPredicted RBP21.43■■□□□ 1.02
PPP1R3F-202ENST00000376188 PPEF1O14829 653 aaPredicted RBP21.43■■□□□ 1.02
PPP1R3F-202ENST00000376188 SPZ1Q9BXG8 430 aa21.43■■□□□ 1.02
PPP1R3F-202ENST00000376188 BARHL2Q9NY43 387 aa21.43■■□□□ 1.02
PPP1R3F-202ENST00000376188 CCDC194A0A1B0GVG4 234 aa21.43■■□□□ 1.02
PPP1R3F-202ENST00000376188 M0R2N6 131 aa21.43■■□□□ 1.02
PPP1R3F-202ENST00000376188 TRIM37O94972 964 aa21.43■■□□□ 1.02
PPP1R3F-202ENST00000376188 CDK11BP21127 795 aaKnown RBP21.43■■□□□ 1.02
PPP1R3F-202ENST00000376188 LONP1P36776 959 aaKnown RBP21.43■■□□□ 1.02
PPP1R3F-202ENST00000376188 WWC2Q6AWC2 1192 aa21.43■■□□□ 1.02
PPP1R3F-202ENST00000376188 SUGT1Q9Y2Z0 365 aa21.43■■□□□ 1.02
PPP1R3F-202ENST00000376188 QSER1Q2KHR3 1735 aa21.42■■□□□ 1.02
PPP1R3F-202ENST00000376188 CTIFO43310 598 aaKnown RBP21.42■■□□□ 1.02
PPP1R3F-202ENST00000376188 CYTH3O43739 400 aa21.42■■□□□ 1.02
PPP1R3F-202ENST00000376188 E2F4Q16254 413 aa21.42■■□□□ 1.02
PPP1R3F-202ENST00000376188 TXLNAP40222 546 aa21.41■■□□□ 1.02
PPP1R3F-202ENST00000376188 TYW1BQ6NUM6 668 aa21.41■■□□□ 1.02
PPP1R3F-202ENST00000376188 COA1Q9GZY4 146 aa21.41■■□□□ 1.02
PPP1R3F-202ENST00000376188 NRXN2Q9P2S2 1712 aa21.41■■□□□ 1.02
PPP1R3F-202ENST00000376188 SLC35G1Q2M3R5 365 aa21.41■■□□□ 1.02
PPP1R3F-202ENST00000376188 HEATR3Q7Z4Q2 680 aa21.41■■□□□ 1.02
PPP1R3F-202ENST00000376188 TRMT44Q8IYL2 757 aaKnown RBP21.41■■□□□ 1.02
PPP1R3F-202ENST00000376188 CCDC12Q8WUD4 166 aaPredicted RBP21.41■■□□□ 1.02
PPP1R3F-202ENST00000376188 TRMT1Q9NXH9 659 aaKnown RBP21.41■■□□□ 1.02
PPP1R3F-202ENST00000376188 ATP6V0A2Q9Y487 856 aa21.41■■□□□ 1.02
PPP1R3F-202ENST00000376188 KLRF2D3W0D1 207 aa21.4■■□□□ 1.02
PPP1R3F-202ENST00000376188 STXBP3O00186 592 aa21.4■■□□□ 1.02
PPP1R3F-202ENST00000376188 ADAMTS3O15072 1205 aa21.4■■□□□ 1.02
PPP1R3F-202ENST00000376188 CCP110O43303 1012 aa21.4■■□□□ 1.02
PPP1R3F-202ENST00000376188 PARP1P09874 1014 aaKnown RBP21.4■■□□□ 1.02
PPP1R3F-202ENST00000376188 SMARCA1P28370 1054 aa21.4■■□□□ 1.02
PPP1R3F-202ENST00000376188 E4F1Q66K89 784 aaPredicted RBP21.4■■□□□ 1.02
PPP1R3F-202ENST00000376188 C4orf32Q8N8J7 132 aa21.4■■□□□ 1.02
PPP1R3F-202ENST00000376188 TXNRD1Q16881 649 aa21.4■■□□□ 1.02
PPP1R3F-202ENST00000376188 INTS13Q9NVM9 706 aa21.4■■□□□ 1.02
PPP1R3F-202ENST00000376188 PCDHA6Q9UN73 950 aa21.4■■□□□ 1.02
PPP1R3F-202ENST00000376188 DAGLAQ9Y4D2 1042 aa21.4■■□□□ 1.02
PPP1R3F-202ENST00000376188 PCDHA8Q9Y5H6 950 aa21.4■■□□□ 1.02
PPP1R3F-202ENST00000376188 GTF2IP78347 998 aa21.39■■□□□ 1.02
PPP1R3F-202ENST00000376188 IL17AQ16552 155 aa21.39■■□□□ 1.02
PPP1R3F-202ENST00000376188 SYNRGQ9UMZ2 1314 aa21.39■■□□□ 1.01
PPP1R3F-202ENST00000376188 TMEM232C9JQI7 657 aa21.39■■□□□ 1.01
PPP1R3F-202ENST00000376188 SPATA1Q5VX52 437 aa21.39■■□□□ 1.01
PPP1R3F-202ENST00000376188 PDXDC2PQ6P474 469 aa21.39■■□□□ 1.01
PPP1R3F-202ENST00000376188 MED15Q96RN5 788 aa21.39■■□□□ 1.01
PPP1R3F-202ENST00000376188 MTMR7Q9Y216 660 aa21.39■■□□□ 1.01
PPP1R3F-202ENST00000376188 PLIN4Q96Q06 1357 aa21.39■■□□□ 1.01
PPP1R3F-202ENST00000376188 LAD1O00515 517 aa21.38■■□□□ 1.01
PPP1R3F-202ENST00000376188 TUBB4AP04350 444 aa21.38■■□□□ 1.01
PPP1R3F-202ENST00000376188 NOVP48745 357 aa21.38■■□□□ 1.01
PPP1R3F-202ENST00000376188 CUL4BQ13620 913 aa21.38■■□□□ 1.01
PPP1R3F-202ENST00000376188 RASGRP4Q8TDF6 673 aa21.38■■□□□ 1.01
PPP1R3F-202ENST00000376188 TMX1Q9H3N1 280 aa21.38■■□□□ 1.01
PPP1R3F-202ENST00000376188 GTPBP6O43824 516 aaPredicted RBP21.38■■□□□ 1.01
PPP1R3F-202ENST00000376188 ZNF592Q92610 1267 aa21.38■■□□□ 1.01
PPP1R3F-202ENST00000376188 ZMYND12Q9H0C1 365 aa21.38■■□□□ 1.01
PPP1R3F-202ENST00000376188 GOLGA8HP0CJ92 632 aa21.37■■□□□ 1.01
PPP1R3F-202ENST00000376188 HSP90AA4PQ58FG1 418 aa21.37■■□□□ 1.01
PPP1R3F-202ENST00000376188 SPECC1LQ69YQ0 1117 aa21.37■■□□□ 1.01
PPP1R3F-202ENST00000376188 NLGN1Q8N2Q7 840 aa21.37■■□□□ 1.01
PPP1R3F-202ENST00000376188 TSC1Q92574 1164 aa21.37■■□□□ 1.01
PPP1R3F-202ENST00000376188 CEP95Q96GE4 821 aa21.37■■□□□ 1.01
PPP1R3F-202ENST00000376188 PPP1R13BQ96KQ4 1090 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms