RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 GPSM2P81274 684 aa13.68□□□□□ -0.22
C9orf3-203ENST00000375315 PPFIA1Q13136 1202 aa13.68□□□□□ -0.22
C9orf3-203ENST00000375315 BIRC2Q13490 618 aa13.68□□□□□ -0.22
C9orf3-203ENST00000375315 GRAPQ13588 217 aa13.68□□□□□ -0.22
C9orf3-203ENST00000375315 PREPLQ4J6C6 727 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-203ENST00000375315 OTUD6BQ8N6M0 293 aa13.68□□□□□ -0.22
C9orf3-203ENST00000375315 TC2NQ8N9U0 490 aa13.68□□□□□ -0.22
C9orf3-203ENST00000375315 GRAPLQ8TC17 118 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-203ENST00000375315 CRACR2AQ9BSW2 395 aa13.68□□□□□ -0.22
C9orf3-203ENST00000375315 IRX2Q9BZI1 471 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-203ENST00000375315 ODF2LQ9ULJ1 636 aa13.68□□□□□ -0.22
C9orf3-203ENST00000375315 U3KPZ7 1027 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-203ENST00000375315 C4BP0C0L5 1744 aa13.68□□□□□ -0.22
C9orf3-203ENST00000375315 ATXN2Q99700 1313 aaKnown RBP13.67□□□□□ -0.22
C9orf3-203ENST00000375315 STIM1Q13586 685 aa13.67□□□□□ -0.22
C9orf3-203ENST00000375315 ZNF569Q5MCW4 686 aa13.67□□□□□ -0.22
C9orf3-203ENST00000375315 SPECC1LQ69YQ0 1117 aa13.67□□□□□ -0.22
C9orf3-203ENST00000375315 Q6ZUG5 572 aa13.67□□□□□ -0.22
C9orf3-203ENST00000375315 ADGRA1Q86SQ6 560 aa13.67□□□□□ -0.22
C9orf3-203ENST00000375315 FBXO41Q8TF61 875 aa13.67□□□□□ -0.22
C9orf3-203ENST00000375315 ZKSCAN4Q969J2 545 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-203ENST00000375315 FAXDC2Q96IV6 333 aa13.67□□□□□ -0.22
C9orf3-203ENST00000375315 NHSQ6T4R5 1651 aa13.67□□□□□ -0.22
C9orf3-203ENST00000375315 PLSCR1O15162 318 aa13.67□□□□□ -0.22
C9orf3-203ENST00000375315 ADKP55263 362 aaKnown RBP13.67□□□□□ -0.22
C9orf3-203ENST00000375315 CTDSPL2Q05D32 466 aa13.67□□□□□ -0.22
C9orf3-203ENST00000375315 C11orf91Q3C1V1 193 aa13.67□□□□□ -0.22
C9orf3-203ENST00000375315 SPATS2Q86XZ4 545 aaKnown RBP13.67□□□□□ -0.22
C9orf3-203ENST00000375315 LCORLQ8N3X6 602 aa13.67□□□□□ -0.22
C9orf3-203ENST00000375315 HPCAL4Q9UM19 191 aa13.67□□□□□ -0.22
C9orf3-203ENST00000375315 CYP2D7A0A087X1C5 515 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 GOLGA6CA6NDK9 693 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 GOLGA6DP0CG33 693 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 RXRAP19793 462 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 ARID4AP29374 1257 aaPredicted RBP13.66□□□□□ -0.22
C9orf3-203ENST00000375315 CRYMQ14894 314 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 TTF1Q15361 905 aaPredicted RBP13.66□□□□□ -0.22
C9orf3-203ENST00000375315 DOK7Q18PE1 504 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 NLGN1Q8N2Q7 840 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 CAPS2Q9BXY5 557 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 GOLGA6AQ9NYA3 693 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 PNPLA7Q6ZV29 1317 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 G3V3G9 751 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 FSBPO95073 299 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 UBE4AQ14139 1066 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 DCAF8Q5TAQ9 597 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 FANCLQ9NW38 375 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 SLC4A4Q9Y6R1 1079 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 SBF2Q86WG5 1849 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 ANKRD36CQ5JPF3 1778 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 SPEF2Q9C093 1822 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 PTPDC1A2A3K4 754 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 ZNF213O14771 459 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 PFKFB2O60825 505 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 ARHGAP25P42331 645 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 PTPN21Q16825 1174 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 NSUN7Q8NE18 718 aaKnown RBP13.66□□□□□ -0.22
C9orf3-203ENST00000375315 ZKSCAN3Q9BRR0 538 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 STK32BQ9NY57 414 aa13.66□□□□□ -0.22
C9orf3-203ENST00000375315 AATFQ9NY61 560 aaKnown RBP eCLIP13.66□□□□□ -0.22
C9orf3-203ENST00000375315 NEDD4P46934 1319 aa13.65□□□□□ -0.22
C9orf3-203ENST00000375315 E7EWF7 191 aa13.65□□□□□ -0.22
C9orf3-203ENST00000375315 EIF3HO15372 352 aaKnown RBP eCLIP13.65□□□□□ -0.22
C9orf3-203ENST00000375315 DIXDC1Q155Q3 683 aa13.65□□□□□ -0.22
C9orf3-203ENST00000375315 LINC00301Q8NCQ3 95 aa13.65□□□□□ -0.22
C9orf3-203ENST00000375315 NKX2-3Q8TAU0 364 aa13.65□□□□□ -0.22
C9orf3-203ENST00000375315 AKT1S1Q96B36 256 aa13.65□□□□□ -0.22
C9orf3-203ENST00000375315 NAPGQ99747 312 aaPredicted RBP13.65□□□□□ -0.22
C9orf3-203ENST00000375315 TRIM6Q9C030 488 aaPredicted RBP13.65□□□□□ -0.22
C9orf3-203ENST00000375315 NCOA5Q9HCD5 579 aaKnown RBP13.65□□□□□ -0.22
C9orf3-203ENST00000375315 CD248Q9HCU0 757 aa13.65□□□□□ -0.22
C9orf3-203ENST00000375315 MYH3P11055 1940 aa13.65□□□□□ -0.22
C9orf3-203ENST00000375315 COL5A3P25940 1745 aaPredicted RBP13.65□□□□□ -0.22
C9orf3-203ENST00000375315 MYO1FO00160 1098 aa13.65□□□□□ -0.22
C9orf3-203ENST00000375315 YEATS4O95619 227 aa13.65□□□□□ -0.22
C9orf3-203ENST00000375315 AKAP17AQ02040 695 aaKnown RBP13.65□□□□□ -0.22
C9orf3-203ENST00000375315 GRIK5Q16478 980 aa13.65□□□□□ -0.22
C9orf3-203ENST00000375315 IQCA1Q86XH1 822 aa13.65□□□□□ -0.22
C9orf3-203ENST00000375315 RBM17Q96I25 401 aaKnown RBP13.65□□□□□ -0.22
C9orf3-203ENST00000375315 NAPBQ9H115 298 aa13.65□□□□□ -0.22
C9orf3-203ENST00000375315 A0A1B0GUA9 196 aa13.64□□□□□ -0.23
C9orf3-203ENST00000375315 A6NNZ2 444 aa13.64□□□□□ -0.23
C9orf3-203ENST00000375315 PRDM1O75626 825 aa13.64□□□□□ -0.23
C9orf3-203ENST00000375315 ZBTB7AO95365 584 aa13.64□□□□□ -0.23
C9orf3-203ENST00000375315 ZFYP08048 801 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-203ENST00000375315 FNTAP49354 379 aa13.64□□□□□ -0.23
C9orf3-203ENST00000375315 IMMTQ16891 758 aaKnown RBP13.64□□□□□ -0.23
C9orf3-203ENST00000375315 TUBB8Q3ZCM7 444 aa13.64□□□□□ -0.23
C9orf3-203ENST00000375315 MICALCLQ6ZW33 695 aa13.64□□□□□ -0.23
C9orf3-203ENST00000375315 COG1Q8WTW3 980 aa13.64□□□□□ -0.23
C9orf3-203ENST00000375315 MXD3Q9BW11 206 aa13.64□□□□□ -0.23
C9orf3-203ENST00000375315 SPTLC2O15270 562 aa13.64□□□□□ -0.23
C9orf3-203ENST00000375315 FOXP2O15409 715 aa13.64□□□□□ -0.23
C9orf3-203ENST00000375315 GNGT1P63211 74 aa13.64□□□□□ -0.23
C9orf3-203ENST00000375315 EVX2Q03828 476 aa13.64□□□□□ -0.23
C9orf3-203ENST00000375315 SLC15A2Q16348 729 aa13.64□□□□□ -0.23
C9orf3-203ENST00000375315 ANKRD2Q9GZV1 360 aa13.64□□□□□ -0.23
C9orf3-203ENST00000375315 TUBE1Q9UJT0 475 aa13.64□□□□□ -0.23
C9orf3-203ENST00000375315 ATF5Q9Y2D1 282 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-203ENST00000375315 ADGRG1Q9Y653 693 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms