RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 MAK16Q9BXY0 300 aaKnown RBP13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 LMBRD1Q9NUN5 540 aa13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 LEMD3Q9Y2U8 911 aa13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 CRB1P82279 1406 aa13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 KIF3CO14782 793 aa13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 TRIM37O94972 964 aa13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 RXRBP28702 533 aa13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 MRPL12P52815 198 aaKnown RBP13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 PTPN12Q05209 780 aaKnown RBP13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 CLEC4GQ6UXB4 293 aa13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 SEPT12Q8IYM1 358 aa13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 LZTS2Q9BRK4 669 aa13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 ZNF804BA4D1E1 1349 aa13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 DPH6Q7L8W6 267 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 IFNL3Q8IZI9 196 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 ARHGAP24Q8N264 748 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 TSKSQ9UJT2 592 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 CEP170BQ9Y4F5 1589 aaPredicted RBP13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 MYCNP04198 464 aaPredicted RBP13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 MTMR3Q13615 1198 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 SLC9C1Q4G0N8 1177 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 BCL2L12Q9HB09 334 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 KNDC1Q76NI1 1749 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 DLG5Q8TDM6 1919 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 HSPA1LP34931 641 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 PHKA1P46020 1223 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 RNASE9P60153 205 aaKnown RBP13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 MAPKAPK5Q8IW41 473 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 CNKSR1Q969H4 720 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 GLT8D2Q9H1C3 349 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 RABEP2Q9H5N1 569 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 ARHGEF10LQ9HCE6 1279 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 ZSWIM6Q9HCJ5 1215 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 ODF2LQ9ULJ1 636 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 XDHP47989 1333 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 POLR2DO15514 142 aaKnown RBP13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 ZNF202O95125 648 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 GTF2IP78347 998 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 TGFBRAP1Q8WUH2 860 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 ZNF274Q96GC6 653 aaPredicted RBP13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 NFE2L3Q9Y4A8 694 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 V9GY48 417 aaPredicted RBP13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 KRT9P35527 623 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 LETM2Q2VYF4 491 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 ARHGEF2Q92974 986 aaKnown RBP13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 VCXQ9H320 206 aa13.62□□□□□ -0.23
NPLOC4-202ENST00000374747 NRKQ7Z2Y5 1582 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 OVOS2A0A0G2JMS6 1433 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 CASQ2O14958 399 aaPredicted RBP13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 PPFIA4O75335 1185 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 ADORA1P30542 326 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 ZNF131P52739 623 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 EIF6P56537 245 aaKnown RBP13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 FAM173BQ6P4H8 233 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 CCDC62Q6P9F0 684 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 SND1Q7KZF4 910 aaKnown RBP eCLIP13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 VPS52Q8N1B4 723 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 B4DLN1 442 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 SNX16P57768 344 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 PLS1Q14651 629 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 ZSCAN26Q16670 478 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 C2CD5Q86YS7 1000 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 FAM212AQ96EL1 285 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 TLR7Q9NYK1 1049 aaKnown RBP13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 CYP2E1P05181 493 aaPredicted RBP13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 BRD3Q15059 726 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 CCDC38Q502W7 563 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 ZMYM1Q5SVZ6 1142 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 NIM1KQ8IY84 436 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 MAP4K1Q92918 833 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 TEKT1Q969V4 418 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 RPGRIP1Q96KN7 1286 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 PPIP5K2O43314 1243 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 GADD45BO75293 160 aaPredicted RBP13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 MAGEA1P43355 309 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 CFAP221Q4G0U5 840 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 LSG1Q9H089 658 aaKnown RBP13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 AGTPBP1Q9UPW5 1226 aa13.61□□□□□ -0.23
NPLOC4-202ENST00000374747 SERPINB2P05120 415 aa13.6□□□□□ -0.23
NPLOC4-202ENST00000374747 MTX1Q13505 466 aa13.6□□□□□ -0.23
NPLOC4-202ENST00000374747 ERFEQ4G0M1 354 aa13.6□□□□□ -0.23
NPLOC4-202ENST00000374747 HOOK2Q96ED9 719 aa13.6□□□□□ -0.23
NPLOC4-202ENST00000374747 TRIM31Q9BZY9 425 aa13.6□□□□□ -0.23
NPLOC4-202ENST00000374747 PLCB1Q9NQ66 1216 aa13.6□□□□□ -0.23
NPLOC4-202ENST00000374747 GJA3Q9Y6H8 435 aa13.6□□□□□ -0.23
NPLOC4-202ENST00000374747 CEP120Q8N960 986 aa13.6□□□□□ -0.23
NPLOC4-202ENST00000374747 FAM204AQ9H8W3 233 aa13.6□□□□□ -0.23
NPLOC4-202ENST00000374747 USP17L12C9JPN9 530 aa13.6□□□□□ -0.23
NPLOC4-202ENST00000374747 USP17L21D6R901 530 aa13.6□□□□□ -0.23
NPLOC4-202ENST00000374747 CEP104O60308 925 aa13.6□□□□□ -0.23
NPLOC4-202ENST00000374747 KRT5P13647 590 aa13.6□□□□□ -0.23
NPLOC4-202ENST00000374747 TFAP4Q01664 338 aa13.6□□□□□ -0.23
NPLOC4-202ENST00000374747 WDR44Q5JSH3 913 aa13.6□□□□□ -0.23
NPLOC4-202ENST00000374747 SDCCAG8Q86SQ7 713 aaPredicted RBP13.6□□□□□ -0.23
NPLOC4-202ENST00000374747 DIS3L2Q8IYB7 885 aaKnown RBP13.6□□□□□ -0.23
NPLOC4-202ENST00000374747 GPT2Q8TD30 523 aa13.6□□□□□ -0.23
NPLOC4-202ENST00000374747 GPCPD1Q9NPB8 672 aa13.6□□□□□ -0.23
NPLOC4-202ENST00000374747 TMEM63CQ9P1W3 806 aa13.6□□□□□ -0.23
NPLOC4-202ENST00000374747 MAPK8IP1Q9UQF2 711 aa13.6□□□□□ -0.23
NPLOC4-202ENST00000374747 E7EVH7 732 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms