RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 SPATA1Q5VX52 437 aa19.33■□□□□ 0.69
RXRB-201ENST00000374680 MRPL44Q9H9J2 332 aaKnown RBP19.33■□□□□ 0.69
RXRB-201ENST00000374680 KIF2AO00139 706 aaPredicted RBP19.33■□□□□ 0.68
RXRB-201ENST00000374680 CYTH3O43739 400 aa19.33■□□□□ 0.68
RXRB-201ENST00000374680 SLURP2P0DP57 97 aa19.33■□□□□ 0.68
RXRB-201ENST00000374680 ZSCAN20P17040 1043 aaPredicted RBP19.33■□□□□ 0.68
RXRB-201ENST00000374680 TRAPPC3LQ5T215 181 aa19.33■□□□□ 0.68
RXRB-201ENST00000374680 CLEC10AQ8IUN9 316 aa19.33■□□□□ 0.68
RXRB-201ENST00000374680 NID2Q14112 1375 aa19.32■□□□□ 0.68
RXRB-201ENST00000374680 RIMBP2O15034 1052 aa19.32■□□□□ 0.68
RXRB-201ENST00000374680 UFL1O94874 794 aa19.32■□□□□ 0.68
RXRB-201ENST00000374680 KIF5BP33176 963 aa19.32■□□□□ 0.68
RXRB-201ENST00000374680 RCAN1P53805 252 aa19.32■□□□□ 0.68
RXRB-201ENST00000374680 UBXN4Q92575 508 aa19.32■□□□□ 0.68
RXRB-201ENST00000374680 AKR1B15C9JRZ8 316 aaPredicted RBP19.32■□□□□ 0.68
RXRB-201ENST00000374680 ABL1P00519 1130 aa19.32■□□□□ 0.68
RXRB-201ENST00000374680 ERCC3P19447 782 aa19.32■□□□□ 0.68
RXRB-201ENST00000374680 STAT6P42226 847 aa19.32■□□□□ 0.68
RXRB-201ENST00000374680 TBX2Q13207 712 aaPredicted RBP19.32■□□□□ 0.68
RXRB-201ENST00000374680 PICALMQ13492 652 aa19.32■□□□□ 0.68
RXRB-201ENST00000374680 CNBD1Q8NA66 436 aa19.32■□□□□ 0.68
RXRB-201ENST00000374680 ZNF397Q8NF99 534 aaPredicted RBP19.32■□□□□ 0.68
RXRB-201ENST00000374680 PKNOX2Q96KN3 472 aa19.32■□□□□ 0.68
RXRB-201ENST00000374680 MYH6P13533 1939 aa19.32■□□□□ 0.68
RXRB-201ENST00000374680 CACNA1SQ13698 1873 aa19.32■□□□□ 0.68
RXRB-201ENST00000374680 RNF225M0QZC1 329 aaPredicted RBP19.31■□□□□ 0.68
RXRB-201ENST00000374680 ZSCAN12O43309 604 aa19.31■□□□□ 0.68
RXRB-201ENST00000374680 FGRP09769 529 aa19.31■□□□□ 0.68
RXRB-201ENST00000374680 CASQ1P31415 396 aa19.31■□□□□ 0.68
RXRB-201ENST00000374680 WWC2Q6AWC2 1192 aa19.31■□□□□ 0.68
RXRB-201ENST00000374680 NOL10Q9BSC4 688 aaKnown RBP19.31■□□□□ 0.68
RXRB-201ENST00000374680 RAD21O60216 631 aa19.31■□□□□ 0.68
RXRB-201ENST00000374680 LETM2Q2VYF4 491 aa19.31■□□□□ 0.68
RXRB-201ENST00000374680 TEX35Q5T0J7 233 aa19.31■□□□□ 0.68
RXRB-201ENST00000374680 RAD9BQ6WBX8 426 aa19.31■□□□□ 0.68
RXRB-201ENST00000374680 SPATA20Q8TB22 786 aa19.31■□□□□ 0.68
RXRB-201ENST00000374680 TMEM47Q9BQJ4 181 aa19.31■□□□□ 0.68
RXRB-201ENST00000374680 DOCK2Q92608 1830 aa19.31■□□□□ 0.68
RXRB-201ENST00000374680 UBAP1LF5GYI3 381 aa19.31■□□□□ 0.68
RXRB-201ENST00000374680 FXR1P51114 621 aaKnown RBP eCLIP19.31■□□□□ 0.68
RXRB-201ENST00000374680 TRIML1Q8N9V2 468 aa19.31■□□□□ 0.68
RXRB-201ENST00000374680 RGS22Q8NE09 1264 aa19.31■□□□□ 0.68
RXRB-201ENST00000374680 CCDC12Q8WUD4 166 aaPredicted RBP19.31■□□□□ 0.68
RXRB-201ENST00000374680 C6orf229H3BNL8 230 aa19.3■□□□□ 0.68
RXRB-201ENST00000374680 SEC31AO94979 1220 aaKnown RBP19.3■□□□□ 0.68
RXRB-201ENST00000374680 ERCC5P28715 1186 aaPredicted RBP19.3■□□□□ 0.68
RXRB-201ENST00000374680 BTDP43251 543 aa19.3■□□□□ 0.68
RXRB-201ENST00000374680 GPSM2P81274 684 aa19.3■□□□□ 0.68
RXRB-201ENST00000374680 SH3RF1Q7Z6J0 888 aa19.3■□□□□ 0.68
RXRB-201ENST00000374680 NELFBQ8WX92 580 aa19.3■□□□□ 0.68
RXRB-201ENST00000374680 RPGRQ92834 1020 aaKnown RBP19.3■□□□□ 0.68
RXRB-201ENST00000374680 USP21Q9UK80 565 aa19.3■□□□□ 0.68
RXRB-201ENST00000374680 SEMA3EO15041 775 aa19.3■□□□□ 0.68
RXRB-201ENST00000374680 L2HGDHQ9H9P8 463 aa19.3■□□□□ 0.68
RXRB-201ENST00000374680 MAD2L2Q9UI95 211 aa19.3■□□□□ 0.68
RXRB-201ENST00000374680 A0A1B0GTH6 734 aa19.29■□□□□ 0.68
RXRB-201ENST00000374680 KLRF2D3W0D1 207 aa19.29■□□□□ 0.68
RXRB-201ENST00000374680 PRCPP42785 496 aa19.29■□□□□ 0.68
RXRB-201ENST00000374680 KRT31Q15323 416 aa19.29■□□□□ 0.68
RXRB-201ENST00000374680 SPTY2D1Q68D10 685 aaPredicted RBP19.29■□□□□ 0.68
RXRB-201ENST00000374680 APTXQ7Z2E3 356 aaKnown RBP19.29■□□□□ 0.68
RXRB-201ENST00000374680 ACRBPQ8NEB7 543 aa19.29■□□□□ 0.68
RXRB-201ENST00000374680 GSDMAQ96QA5 445 aa19.29■□□□□ 0.68
RXRB-201ENST00000374680 ZNF446Q9NWS9 450 aa19.29■□□□□ 0.68
RXRB-201ENST00000374680 FRMPD2Q68DX3 1309 aaPredicted RBP19.29■□□□□ 0.68
RXRB-201ENST00000374680 UBA7P41226 1012 aa19.29■□□□□ 0.68
RXRB-201ENST00000374680 FILIP1LQ4L180 1135 aa19.29■□□□□ 0.68
RXRB-201ENST00000374680 CCDC93Q567U6 631 aa19.29■□□□□ 0.68
RXRB-201ENST00000374680 JAKMIP3Q5VZ66 844 aa19.29■□□□□ 0.68
RXRB-201ENST00000374680 AMOTL1Q8IY63 956 aa19.29■□□□□ 0.68
RXRB-201ENST00000374680 TEX11Q8IYF3 940 aa19.29■□□□□ 0.68
RXRB-201ENST00000374680 HPS3Q969F9 1004 aa19.29■□□□□ 0.68
RXRB-201ENST00000374680 NUP88Q99567 741 aaPredicted RBP19.29■□□□□ 0.68
RXRB-201ENST00000374680 OGFRQ9NZT2 677 aa19.29■□□□□ 0.68
RXRB-201ENST00000374680 ADD3Q9UEY8 706 aaKnown RBP19.29■□□□□ 0.68
RXRB-201ENST00000374680 DDX41Q9UJV9 622 aaKnown RBP19.29■□□□□ 0.68
RXRB-201ENST00000374680 CNTNAP4Q9C0A0 1308 aa19.29■□□□□ 0.68
RXRB-201ENST00000374680 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.28■□□□□ 0.68
RXRB-201ENST00000374680 STX10O60499 249 aa19.28■□□□□ 0.68
RXRB-201ENST00000374680 BAG3O95817 575 aa19.28■□□□□ 0.68
RXRB-201ENST00000374680 ATP2B2Q01814 1243 aa19.28■□□□□ 0.68
RXRB-201ENST00000374680 E2F4Q16254 413 aa19.28■□□□□ 0.68
RXRB-201ENST00000374680 DTHD1Q6ZMT9 781 aa19.28■□□□□ 0.68
RXRB-201ENST00000374680 SMAP1Q8IYB5 467 aaPredicted RBP19.28■□□□□ 0.68
RXRB-201ENST00000374680 PUF60Q9UHX1 559 aaKnown RBP19.28■□□□□ 0.68
RXRB-201ENST00000374680 TFR2Q9UP52 801 aa19.28■□□□□ 0.68
RXRB-201ENST00000374680 PARP3Q9Y6F1 533 aa19.28■□□□□ 0.68
RXRB-201ENST00000374680 DUOX1Q9NRD9 1551 aa19.28■□□□□ 0.68
RXRB-201ENST00000374680 RPN1P04843 607 aaKnown RBP19.28■□□□□ 0.68
RXRB-201ENST00000374680 NAPAP54920 295 aa19.28■□□□□ 0.68
RXRB-201ENST00000374680 PDXDC2PQ6P474 469 aa19.28■□□□□ 0.68
RXRB-201ENST00000374680 PCDHA4Q9UN74 947 aa19.28■□□□□ 0.68
RXRB-201ENST00000374680 BCORQ6W2J9 1755 aa19.28■□□□□ 0.68
RXRB-201ENST00000374680 PHLPP1O60346 1717 aa19.28■□□□□ 0.68
RXRB-201ENST00000374680 CLCN6P51797 869 aa19.28■□□□□ 0.68
RXRB-201ENST00000374680 PMS1P54277 932 aaKnown RBP19.28■□□□□ 0.68
RXRB-201ENST00000374680 WDR66Q8TBY9 1149 aa19.28■□□□□ 0.68
RXRB-201ENST00000374680 EYA3Q99504 573 aa19.28■□□□□ 0.68
RXRB-201ENST00000374680 MXD3Q9BW11 206 aa19.28■□□□□ 0.68
RXRB-201ENST00000374680 KCND1Q9NSA2 647 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms